RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 PVRIGQ6DKI7 326 aa9.28□□□□□ -0.92
COL11A1-202ENST00000358392 TRAV13-1A0A0B4J241 112 aa9.27□□□□□ -0.92
COL11A1-202ENST00000358392 UBE2E2Q96LR5 201 aa9.27□□□□□ -0.92
COL11A1-202ENST00000358392 SPXQ9BT56 116 aa9.27□□□□□ -0.92
COL11A1-202ENST00000358392 YLPM1P49750 1951 aaKnown RBP9.27□□□□□ -0.92
COL11A1-202ENST00000358392 LEPROTO15243 131 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 TNFSF13O75888 250 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 SMIM10L1P0DMW3 83 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 KIR3DS1Q14943 382 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 TEX43Q6ZNM6 134 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 SMIM10Q96HG1 83 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 RSPO3Q9BXY4 272 aaPredicted RBP9.27□□□□□ -0.93
COL11A1-202ENST00000358392 ANAPC10Q9UM13 185 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 KLRD1Q13241 179 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 C8orf46Q8TAG6 207 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 Q8TAT8 98 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 DLX4Q92988 240 aaPredicted RBP9.27□□□□□ -0.93
COL11A1-202ENST00000358392 LYZL4Q96KX0 146 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 TIMM23O14925 209 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 TEX38Q6PEX7 206 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 ADAMTSL5Q6ZMM2 481 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 C1QTNF5Q9BXJ0 243 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 C17orf100A8MU93 164 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 F2Z2F3 143 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 NDUFS6O75380 124 aaKnown RBP9.27□□□□□ -0.93
COL11A1-202ENST00000358392 ZNF497Q6ZNH5 498 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 PRSS22Q9GZN4 317 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 CSTL1Q9H114 145 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 AHDC1Q5TGY3 1603 aaPredicted RBP9.27□□□□□ -0.93
COL11A1-202ENST00000358392 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 C9orf106Q8NAJ2 232 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 C1orf159Q96HA4 380 aa9.27□□□□□ -0.93
COL11A1-202ENST00000358392 ZNF236Q9UL36 1845 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.26□□□□□ -0.93
COL11A1-202ENST00000358392 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 A0A087WWL8 130 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 ERCC8Q13216 396 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 TMEM256Q8N2U0 113 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 CTHRC1Q96CG8 243 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 IQCF6A8MYZ5 107 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 MPV17L2Q567V2 206 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 TMEM133Q9H2Q1 129 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 FANCMQ8IYD8 2048 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 SHANK3Q9BYB0 1731 aa9.26□□□□□ -0.93
COL11A1-202ENST00000358392 A0A0A6YYD4 124 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 NRN1LQ496H8 165 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 GREM1O60565 184 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 BTCP35070 178 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 C10orf55Q5SWW7 151 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 ABHD17AQ96GS6 310 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 DOCK9Q9BZ29 2069 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 SH2D1AO60880 128 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 FCN3O75636 299 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 TRBV6-7A0A0A0MS04 114 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 PRDM6Q9NQX0 595 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 PPBPP02775 128 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 TMEM158Q8WZ71 300 aa9.25□□□□□ -0.93
COL11A1-202ENST00000358392 SLC25A39Q9BZJ4 359 aaPredicted RBP9.25□□□□□ -0.93
COL11A1-202ENST00000358392 C14orf178Q8N769 122 aaPredicted RBP9.25□□□□□ -0.93
COL11A1-202ENST00000358392 SRRM4A7MD48 611 aaKnown RBP9.24□□□□□ -0.93
COL11A1-202ENST00000358392 YPEL1O60688 119 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 YPEL2Q96QA6 119 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 DLEU1O43261 78 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 HGFACQ04756 655 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 EPOPA6NHQ4 379 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 H0YIZ8 118 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 CFHR3Q02985 330 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 CACNA1DQ01668 2161 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 TCF15Q12870 199 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 RBMY1FQ15415 496 aaKnown RBP9.24□□□□□ -0.93
COL11A1-202ENST00000358392 MRPL52Q86TS9 123 aaKnown RBP9.24□□□□□ -0.93
COL11A1-202ENST00000358392 RASL10AQ92737 203 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 PATJQ8NI35 1801 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 NUP35Q8NFH5 326 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 CABIN1Q9Y6J0 2220 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 SCN4AP35499 1836 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 LY6G6FQ5SQ64 297 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 PLSCR4Q9NRQ2 329 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 KLF12Q9Y4X4 402 aa9.24□□□□□ -0.93
COL11A1-202ENST00000358392 C15orf32Q32M92 178 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 VMO1Q7Z5L0 202 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 HAPLN4Q86UW8 402 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 OVOL1O14753 267 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 PLEKHB2Q96CS7 222 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 PTPRZ1P23471 2315 aaPredicted RBP9.23□□□□□ -0.93
COL11A1-202ENST00000358392 TRAV12-1A0A0B4J245 112 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 GAGE12BA1L429 117 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 MBNL3Q9NUK0 354 aaKnown RBP9.23□□□□□ -0.93
COL11A1-202ENST00000358392 IGKV1D-8A0A087WSZ0 117 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 F8VVB4 439 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 F8VWA3 439 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 HOXD3P31249 432 aaPredicted RBP9.23□□□□□ -0.93
COL11A1-202ENST00000358392 TRPM3Q9HCF6 1732 aaPredicted RBP9.23□□□□□ -0.93
COL11A1-202ENST00000358392 PRCDQ00LT1 54 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 LINC00477Q96M19 166 aa9.23□□□□□ -0.93
COL11A1-202ENST00000358392 IGFBP3P17936 291 aaPredicted RBP9.22□□□□□ -0.93
COL11A1-202ENST00000358392 C5orf24Q7Z6I8 188 aa9.22□□□□□ -0.93
COL11A1-202ENST00000358392 TRAV25A0A0B4J276 109 aa9.22□□□□□ -0.93
COL11A1-202ENST00000358392 KLF17Q5JT82 389 aaPredicted RBP9.22□□□□□ -0.93
COL11A1-202ENST00000358392 WNT2P09544 360 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms