RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 TUSC5Q8IXB3 177 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 SYT8Q8NBV8 401 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 LINC01619G3V211 115 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 PRRG2O14669 202 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 NDUFB8O95169 186 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 FSTL3O95633 263 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 WNT10AQ9GZT5 417 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 COL9A1P20849 921 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 FOXA3P55318 350 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-204ENST00000358025 LAGE3Q14657 143 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-204ENST00000358025 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 PRNTQ86SH4 94 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 KLF14Q8TD94 323 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-204ENST00000358025 RPL27AP46776 148 aaKnown RBP3.4□□□□□ -1.87
SYNE2-204ENST00000358025 RBX1P62877 108 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 SLC22A18ASQ8N1D0 253 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 SPSB2Q99619 263 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 KLHDC3Q9BQ90 382 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 LOXL2Q9Y4K0 774 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 PSG1P11464 419 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 NEGR1Q7Z3B1 354 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 C1orf210Q8IVY1 113 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 Q9H3A6 140 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 IGKV1D-43A0A0B4J1Z2 117 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 SMAD7O15105 426 aaKnown RBP3.4□□□□□ -1.87
SYNE2-204ENST00000358025 TNFAIP6P98066 277 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-204ENST00000358025 MRPL23Q16540 153 aaKnown RBP3.4□□□□□ -1.87
SYNE2-204ENST00000358025 LINC00305Q7Z4B0 112 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 PLPPR2Q96GM1 343 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 TMEM238C9JI98 176 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 MRPL53Q96EL3 112 aaKnown RBP3.39□□□□□ -1.87
SYNE2-204ENST00000358025 GNG7O60262 68 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 SS18L1O75177 396 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-204ENST00000358025 CD55P08174 381 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 WNT5AP41221 380 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 NMUP48645 174 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 TMEM78Q5T7P6 136 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 RFESDQ8TAC1 157 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 NPIPB3Q92617 1050 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 SLC50A1Q9BRV3 221 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 TM2D2Q9BX73 214 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 EREGO14944 169 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 SLAQ13239 276 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 UNQ5815/PRO19632Q6UWF5 114 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 DLX6P56179 175 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 A0A0C4DFX4 3053 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 C17orf98A8MV24 154 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 SFTA2Q6UW10 78 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 MIR17HGQ75NE6 70 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 SRSF12Q8WXF0 261 aaKnown RBP3.39□□□□□ -1.87
SYNE2-204ENST00000358025 RPUSD1Q9UJJ7 312 aaKnown RBP3.39□□□□□ -1.87
SYNE2-204ENST00000358025 LRRC29Q8WV35 223 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 ZNF501Q96CX3 271 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-204ENST00000358025 PRR20EP86478 221 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 PRR20CP86479 221 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 PRR20DP86480 221 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 PRR20BP86481 221 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 PRR20AP86496 221 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 STPG4Q8N801 248 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 P0C879 139 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 TMEM141Q96I45 108 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 SHISA5Q8N114 240 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 DEFB108BQ8NET1 73 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 RSPO1Q2MKA7 263 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-204ENST00000358025 RPL11P62913 178 aaKnown RBP3.39□□□□□ -1.87
SYNE2-204ENST00000358025 KIR3DS1Q14943 382 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 MPV17L2Q567V2 206 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 FAM104BQ5XKR9 115 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 Q6ZRM9 215 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 CEND1Q8N111 149 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 METTL26Q96S19 204 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 PF4V1P10720 104 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 ATOH7Q8N100 152 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 SPANXN1Q5VSR9 72 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 CSPG4Q6UVK1 2322 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 IGKV1-12A0A0C4DH73 117 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 IGKV1D-12P01611 117 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 THBDP07204 575 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 NPPCP23582 126 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 ABHD17AQ96GS6 310 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 RAX2Q96IS3 184 aa3.39□□□□□ -1.87
SYNE2-204ENST00000358025 SLC25A16P16260 332 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 C20orf78Q9BR46 151 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 PLA2G2EQ9NZK7 142 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 IGHV3-13P01766 116 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 SPINK8P0C7L1 97 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 C1orf185Q5T7R7 199 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 LCN12Q6JVE5 192 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 RBAKDNA6NC62 111 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 H3BMG7 143 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 ZNF726P1Q15940 193 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 MDP1Q86V88 176 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 LOC107984156A0A0G2JMH3 177 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 TGFBR3LH3BV60 316 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 GUSBP11Q6P575 273 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 ARL17AQ8IVW1 177 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 IGKV1-27A0A075B6S5 117 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 NPIPB6E9PJ23 425 aa3.38□□□□□ -1.87
SYNE2-204ENST00000358025 M0QXV9 152 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms