RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CT45A1Q5HYN5 189 aa6.71□□□□□ -1.33
CDC42SE1-201ENST00000357235 CT45A3Q8NHU0 189 aa6.71□□□□□ -1.33
CDC42SE1-201ENST00000357235 SCRT2Q9NQ03 307 aa6.71□□□□□ -1.33
CDC42SE1-201ENST00000357235 PGPEP1Q9NXJ5 209 aa6.71□□□□□ -1.33
CDC42SE1-201ENST00000357235 ISLRO14498 428 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 PYYP10082 97 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRB4P10163 310 aaPredicted RBP6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 AREGP15514 252 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 LOXL3P58215 753 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 RPL8P62917 257 aaKnown RBP6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 MORN5Q5VZ52 161 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRR7Q8TB68 274 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 ZNF318Q5VUA4 2279 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 PLXNB1O43157 2135 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 VSTM5A8MXK1 200 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 CD24P25063 80 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 TAS2R45P59539 299 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 FA2HQ7L5A8 372 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 GCSAMQ8N6F7 178 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 TMEM178AQ8NBL3 297 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 MDS2Q8NDY4 140 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 OR52E5Q8NH55 327 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 SNRNP40Q96DI7 357 aaKnown RBP6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 SAP30LQ9HAJ7 183 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 IDI2-AS1Q9NZ38 188 aa6.71□□□□□ -1.34
CDC42SE1-201ENST00000357235 TMEM189A5PLL7 270 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 SYS1-DBNDD2H3BUS1 97 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 M0R1B8 84 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 APELAP0DMC3 54 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 FOXA3P55318 350 aaPredicted RBP6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 TMPRSS3P57727 454 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRR20EP86478 221 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRR20CP86479 221 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRR20DP86480 221 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRR20BP86481 221 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRR20AP86496 221 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 C1orf210Q8IVY1 113 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 C9orf106Q8NAJ2 232 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 C11orf52Q96A22 123 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 RAB37Q96AX2 223 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 MS4A6AQ9H2W1 248 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 TNFRSF19Q9NS68 423 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 DMXL2Q8TDJ6 3036 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 FBLL1A6NHQ2 334 aaKnown RBP6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 C21orf140B9A014 251 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 H3BTX0 84 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 CRXO43186 299 aaPredicted RBP6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 TSPAN13O95857 204 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 IGKV3-15P01624 115 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 FABP2P12104 132 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 ITLN1Q8WWA0 313 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 ZNF503Q96F45 646 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 SS18L2Q9UHA2 77 aa6.7□□□□□ -1.34
CDC42SE1-201ENST00000357235 A0A1W2PPM0 123 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRR33A8MZF0 331 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 SNAI2O43623 268 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 GNG5P63218 68 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 SPACA3Q8IXA5 215 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 PMCHL2Q9BQD1 86 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 SPATA25Q9BR10 227 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 MRPL16Q9NX20 251 aaKnown RBP6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 AMMECR1Q9Y4X0 333 aaPredicted RBP6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 LY96Q9Y6Y9 160 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 TRGV8A0A0C4DH27 118 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 IGHV1-18A0A0C4DH31 117 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 SH2D7A6NKC9 451 aaPredicted RBP6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 SRRM4A7MD48 611 aaKnown RBP6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 OR11H12B2RN74 326 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 SRRM5B3KS81 715 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 C8orf88P0DMB2 117 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 KIR2DL2P43627 348 aaPredicted RBP6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 KIR3DS1Q14943 382 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 MSMPQ1L6U9 139 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 FAM90A1Q86YD7 464 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 OR11H1Q8NG94 326 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 OR11H2Q8NH07 326 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 CCL13Q99616 98 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 OSTCQ9NRP0 149 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 TMEM14BQ9NUH8 114 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 C1RLQ9NZP8 487 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 ZNF835Q9Y2P0 537 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 ZNF257Q9Y2Q1 563 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 HILPDAQ9Y5L2 63 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 NAV3Q8IVL0 2385 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 PCNX1Q96RV3 2341 aa6.69□□□□□ -1.34
CDC42SE1-201ENST00000357235 IGHV3-21A0A0B4J1V1 117 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 FAM90A9PA6NNJ1 464 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 COX7A2P2O60397 106 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 SSBP2P81877 361 aaPredicted RBP6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 SRSF6Q13247 344 aaKnown RBP6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 FAM216BQ8N7L0 139 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 MCRIP2Q9BUT9 160 aaKnown RBP6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 FOXA2Q9Y261 457 aaPredicted RBP6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 ADGRG4Q8IZF6 3080 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 LEPROTL1O95214 131 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 CRYGCP07315 174 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 COX8AP10176 69 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 ORM2P19652 201 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 KIR2DS2P43631 304 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms