RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 OTOGLQ3ZCN5 2332 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 Q6P435 159 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 GLMPQ8WWB7 406 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 SRSF8Q9BRL6 282 aaKnown RBP12.75□□□□□ -0.37
RTN3-205ENST00000356000 PKIBQ9C010 78 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 PEX7O00628 323 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 LTAP01374 205 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 FKBP2P26885 142 aaKnown RBP12.74□□□□□ -0.37
RTN3-205ENST00000356000 RBPMS2Q6ZRY4 209 aaKnown RBP12.74□□□□□ -0.37
RTN3-205ENST00000356000 CITED1Q99966 193 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 OR2H1Q9GZK4 316 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 TCF19Q9Y242 345 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 MED12Q93074 2177 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 CCDC179H3BU77 68 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 DSCR4P56555 118 aaPredicted RBP12.74□□□□□ -0.37
RTN3-205ENST00000356000 SRSF1Q07955 248 aaKnown RBP eCLIP12.74□□□□□ -0.372e-7■■□□□ 13.4
RTN3-205ENST00000356000 MOGAT3Q86VF5 341 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 GFRA4Q9GZZ7 299 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 VCX2Q9H322 139 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 VPREB3Q9UKI3 123 aa12.74□□□□□ -0.37
RTN3-205ENST00000356000 B4GALT1P15291 398 aa12.73□□□□□ -0.37
RTN3-205ENST00000356000 SRD5A1P18405 259 aa12.73□□□□□ -0.37
RTN3-205ENST00000356000 CFAP126Q5VTH2 177 aa12.73□□□□□ -0.37
RTN3-205ENST00000356000 ZFHX2Q9C0A1 2572 aaPredicted RBP12.73□□□□□ -0.37
RTN3-205ENST00000356000 IGHV3-15A0A0B4J1V0 119 aa12.73□□□□□ -0.37
RTN3-205ENST00000356000 LINC00473A8K010 186 aa12.73□□□□□ -0.37
RTN3-205ENST00000356000 C8orf88P0DMB2 117 aa12.73□□□□□ -0.37
RTN3-205ENST00000356000 DUTP33316 252 aaKnown RBP12.73□□□□□ -0.37
RTN3-205ENST00000356000 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
RTN3-205ENST00000356000 GNG3P63215 75 aa12.73□□□□□ -0.37
RTN3-205ENST00000356000 RRN3P1Q2M238 152 aa12.73□□□□□ -0.37
RTN3-205ENST00000356000 C12orf74Q32Q52 190 aa12.73□□□□□ -0.37
RTN3-205ENST00000356000 PRDM14Q9GZV8 571 aa12.73□□□□□ -0.37
RTN3-205ENST00000356000 DIAPH2-AS1Q14236 149 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 PRSS3P2Q8NHM4 247 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 SEC16AO15027 2179 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 TNRC6BQ9UPQ9 1833 aaKnown RBP12.72□□□□□ -0.37
RTN3-205ENST00000356000 LRP4O75096 1905 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 HAX1O00165 279 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 RHODO00212 210 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 PRRG2O14669 202 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 PSMG4Q5JS54 123 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 OR9G1Q8NH87 305 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 ZNF414Q96IQ9 312 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 SLC25A33Q9BSK2 321 aa12.72□□□□□ -0.37
RTN3-205ENST00000356000 ABCA7Q8IZY2 2146 aa12.71□□□□□ -0.37
RTN3-205ENST00000356000 TRAV5A0A0B4J249 113 aa12.71□□□□□ -0.37
RTN3-205ENST00000356000 SRRM4A7MD48 611 aaKnown RBP12.71□□□□□ -0.37
RTN3-205ENST00000356000 NPIPB5A8MRT5 1133 aa12.71□□□□□ -0.37
RTN3-205ENST00000356000 IGHG4P01861 327 aa12.71□□□□□ -0.37
RTN3-205ENST00000356000 RBP4P02753 201 aa12.71□□□□□ -0.37
RTN3-205ENST00000356000 ACP1P24666 158 aa12.71□□□□□ -0.37
RTN3-205ENST00000356000 ATP5J2P56134 94 aa12.71□□□□□ -0.37
RTN3-205ENST00000356000 ZNF329Q86UD4 541 aa12.71□□□□□ -0.37
RTN3-205ENST00000356000 UCN2Q96RP3 112 aa12.71□□□□□ -0.37
RTN3-205ENST00000356000 SLC25A5P05141 298 aaKnown RBP12.71□□□□□ -0.38
RTN3-205ENST00000356000 PRTN3P24158 256 aa12.71□□□□□ -0.38
RTN3-205ENST00000356000 LINC00205P59089 165 aa12.71□□□□□ -0.38
RTN3-205ENST00000356000 LPAL2Q16609 132 aa12.71□□□□□ -0.38
RTN3-205ENST00000356000 KLF13Q9Y2Y9 288 aaPredicted RBP12.71□□□□□ -0.38
RTN3-205ENST00000356000 EML6Q6ZMW3 1958 aa12.71□□□□□ -0.38
RTN3-205ENST00000356000 CENPVL3A0A0U1RRI6 287 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 A0A1W2PQM1 296 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 NDUFV3P56181 108 aaKnown RBP12.7□□□□□ -0.38
RTN3-205ENST00000356000 PLP2Q04941 152 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 SRYQ05066 204 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 LINC00322Q6ZN03 302 aaPredicted RBP12.7□□□□□ -0.38
RTN3-205ENST00000356000 SPANXA1Q9NS26 97 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 GVINP1Q7Z2Y8 2422 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 TRBV25-1A0A075B6N4 114 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 TRGV8A0A0C4DH27 118 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 IGHV3-20A0A0C4DH32 117 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 ZNF883P0CG24 379 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 FAM106CPP0CH98 169 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 UBE2L3P68036 154 aaKnown RBP12.7□□□□□ -0.38
RTN3-205ENST00000356000 FAM106AQ4KMX7 169 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 PPDPFLQ8WWR9 84 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 FAM167A-AS1Q96KT0 104 aa12.7□□□□□ -0.38
RTN3-205ENST00000356000 C19orf71A6NCJ1 209 aa12.69□□□□□ -0.38
RTN3-205ENST00000356000 MEOX1P50221 254 aa12.69□□□□□ -0.38
RTN3-205ENST00000356000 ANXA2RQ3ZCQ2 193 aa12.69□□□□□ -0.38
RTN3-205ENST00000356000 FAM53AQ6NSI3 398 aaPredicted RBP12.69□□□□□ -0.38
RTN3-205ENST00000356000 PIP4P1Q86T03 277 aa12.69□□□□□ -0.38
RTN3-205ENST00000356000 YRDCQ86U90 279 aaKnown RBP12.69□□□□□ -0.38
RTN3-205ENST00000356000 COQ2Q96H96 371 aa12.69□□□□□ -0.38
RTN3-205ENST00000356000 MLST8Q9BVC4 326 aa12.69□□□□□ -0.38
RTN3-205ENST00000356000 IGKV2D-26A0A0A0MRZ7 120 aa12.69□□□□□ -0.38
RTN3-205ENST00000356000 K7EMI3 77 aa12.69□□□□□ -0.38
RTN3-205ENST00000356000 LOXL1Q08397 574 aaPredicted RBP12.69□□□□□ -0.38
RTN3-205ENST00000356000 CARD19Q96LW7 228 aa12.69□□□□□ -0.38
RTN3-205ENST00000356000 ZNF492Q9P255 531 aa12.69□□□□□ -0.38
RTN3-205ENST00000356000 TET2Q6N021 2002 aaPredicted RBP12.68□□□□□ -0.38
RTN3-205ENST00000356000 IGHV5-51A0A0C4DH38 117 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 P01737 135 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 SP1P08047 785 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 MPV17P39210 176 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 PCBD1P61457 104 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 MSRB2Q9Y3D2 182 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 M0QXV9 152 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 OR2H2O95918 312 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms