RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 PAXXQ9BUH6 204 aa20.18■□□□□ 0.82
CLK2-201ENST00000355560 OR2J3O76001 311 aa20.18■□□□□ 0.82
CLK2-201ENST00000355560 RD3LP0DJH9 198 aa20.18■□□□□ 0.82
CLK2-201ENST00000355560 LRRC75A-AS1Q8N1F1 130 aa20.18■□□□□ 0.82
CLK2-201ENST00000355560 FAM24BQ8N5W8 94 aa20.18■□□□□ 0.82
CLK2-201ENST00000355560 HIST1H2BAQ96A08 127 aa20.18■□□□□ 0.82
CLK2-201ENST00000355560 OR51M1Q9H341 326 aa20.18■□□□□ 0.82
CLK2-201ENST00000355560 J3QKU1 62 aa20.17■□□□□ 0.82
CLK2-201ENST00000355560 LOXL1Q08397 574 aaPredicted RBP20.17■□□□□ 0.82
CLK2-201ENST00000355560 Q5PR19 223 aa20.17■□□□□ 0.82
CLK2-201ENST00000355560 FAM110DQ8TAY7 271 aaPredicted RBP20.17■□□□□ 0.82
CLK2-201ENST00000355560 GNG7O60262 68 aa20.17■□□□□ 0.82
CLK2-201ENST00000355560 FABP1P07148 127 aa20.17■□□□□ 0.82
CLK2-201ENST00000355560 LINC01548A6NM66 108 aa20.16■□□□□ 0.82
CLK2-201ENST00000355560 NDUFB8O95169 186 aa20.16■□□□□ 0.82
CLK2-201ENST00000355560 MFAP4P55083 255 aa20.16■□□□□ 0.82
CLK2-201ENST00000355560 RNF212Q495C1 297 aa20.16■□□□□ 0.82
CLK2-201ENST00000355560 C21orf62Q9NYP8 219 aa20.16■□□□□ 0.82
CLK2-201ENST00000355560 A0A1W2PRE2 83 aa20.15■□□□□ 0.82
CLK2-201ENST00000355560 GGTLC3B5MD39 225 aa20.15■□□□□ 0.82
CLK2-201ENST00000355560 TGFAP01135 160 aa20.15■□□□□ 0.82
CLK2-201ENST00000355560 C16orf82Q7Z2V1 217 aa20.15■□□□□ 0.82
CLK2-201ENST00000355560 C11orf52Q96A22 123 aa20.15■□□□□ 0.82
CLK2-201ENST00000355560 HIGD1AQ9Y241 93 aa20.15■□□□□ 0.82
CLK2-201ENST00000355560 H3BUX3 64 aa20.15■□□□□ 0.82
CLK2-201ENST00000355560 MT-ND4LP03901 98 aa20.15■□□□□ 0.82
CLK2-201ENST00000355560 AMY1AP04745 511 aa20.15■□□□□ 0.82
CLK2-201ENST00000355560 Q56UQ5 140 aa20.15■□□□□ 0.82
CLK2-201ENST00000355560 ZNF48Q96MX3 618 aaPredicted RBP20.15■□□□□ 0.82
CLK2-201ENST00000355560 F8W735 103 aaPredicted RBP20.14■□□□□ 0.81
CLK2-201ENST00000355560 LY6EQ16553 131 aa20.14■□□□□ 0.81
CLK2-201ENST00000355560 STXBP6Q8NFX7 210 aa20.14■□□□□ 0.81
CLK2-201ENST00000355560 FXYD5Q96DB9 178 aa20.14■□□□□ 0.81
CLK2-201ENST00000355560 FBXL7Q9UJT9 491 aa20.14■□□□□ 0.81
CLK2-201ENST00000355560 TRAV30A0A087WSZ9 112 aa20.14■□□□□ 0.81
CLK2-201ENST00000355560 CXorf65A6NEN9 183 aa20.14■□□□□ 0.81
CLK2-201ENST00000355560 G3V318 75 aa20.14■□□□□ 0.81
CLK2-201ENST00000355560 TOMM40O96008 361 aa20.14■□□□□ 0.81
CLK2-201ENST00000355560 TMEM242Q9NWH2 141 aa20.14■□□□□ 0.81
CLK2-201ENST00000355560 URGCP-MRPS24S4R325 110 aa20.14■□□□□ 0.81
CLK2-201ENST00000355560 TRBV20OR9-2A0A075B6H5 130 aa20.13■□□□□ 0.81
CLK2-201ENST00000355560 IGHV3-23P01764 117 aa20.13■□□□□ 0.81
CLK2-201ENST00000355560 CRYBA1P05813 215 aa20.13■□□□□ 0.81
CLK2-201ENST00000355560 HIST1H1BP16401 226 aaKnown RBP20.13■□□□□ 0.81
CLK2-201ENST00000355560 LEMD1Q68G75 181 aa20.13■□□□□ 0.81
CLK2-201ENST00000355560 YPEL4Q96NS1 127 aa20.13■□□□□ 0.81
CLK2-201ENST00000355560 SUMO1P63165 101 aaKnown RBP20.12■□□□□ 0.81
CLK2-201ENST00000355560 ZNF343Q6P1L6 599 aa20.12■□□□□ 0.81
CLK2-201ENST00000355560 LINC01551Q86U37 167 aa20.12■□□□□ 0.81
CLK2-201ENST00000355560 TMEM68Q96MH6 324 aa20.12■□□□□ 0.81
CLK2-201ENST00000355560 PRELID1Q9Y255 219 aa20.12■□□□□ 0.81
CLK2-201ENST00000355560 CSPG4Q6UVK1 2322 aa20.12■□□□□ 0.81
CLK2-201ENST00000355560 J3QLI3 93 aa20.12■□□□□ 0.81
CLK2-201ENST00000355560 CR1P17927 2039 aa20.12■□□□□ 0.81
CLK2-201ENST00000355560 PGPEP1LA6NFU8 196 aa20.11■□□□□ 0.81
CLK2-201ENST00000355560 CLDN34H7C241 214 aa20.11■□□□□ 0.81
CLK2-201ENST00000355560 SNRPCP09234 159 aaKnown RBP20.11■□□□□ 0.81
CLK2-201ENST00000355560 CRYBB3P26998 211 aa20.11■□□□□ 0.81
CLK2-201ENST00000355560 SLC25A39Q9BZJ4 359 aaPredicted RBP20.11■□□□□ 0.81
CLK2-201ENST00000355560 CTDSP1Q9GZU7 261 aa20.11■□□□□ 0.81
CLK2-201ENST00000355560 APCP25054 2843 aa20.11■□□□□ 0.81
CLK2-201ENST00000355560 IL4P05112 153 aa20.11■□□□□ 0.81
CLK2-201ENST00000355560 YPEL3P61236 119 aaPredicted RBP20.11■□□□□ 0.81
CLK2-201ENST00000355560 RNF125Q96EQ8 232 aa20.11■□□□□ 0.81
CLK2-201ENST00000355560 AURKAIP1Q9NWT8 199 aaPredicted RBP20.11■□□□□ 0.81
CLK2-201ENST00000355560 MRPL27Q9P0M9 148 aaKnown RBP20.11■□□□□ 0.81
CLK2-201ENST00000355560 LOC105371267A0A1B0GV96 52 aa20.1■□□□□ 0.81
CLK2-201ENST00000355560 A6NDX4 124 aa20.1■□□□□ 0.81
CLK2-201ENST00000355560 ELOBQ15370 118 aa20.1■□□□□ 0.81
CLK2-201ENST00000355560 ZNF491Q8N8L2 437 aa20.1■□□□□ 0.81
CLK2-201ENST00000355560 OR2T8A6NH00 312 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 IGHV4-31P0DP07 118 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 GP9P14770 177 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 RAB5AP20339 215 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 RPL35P42766 123 aaKnown RBP20.09■□□□□ 0.81
CLK2-201ENST00000355560 C15orf32Q32M92 178 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 HIST2H2BCQ6DN03 193 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 Q8WTZ3 238 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 MLXQ9UH92 298 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 MDFIC2A0A1B0GVS7 189 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 RHOGP84095 191 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 C9orf152Q5JTZ5 239 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 Q96MF0 132 aa20.09■□□□□ 0.81
CLK2-201ENST00000355560 KLK9Q2XQG4 91 aa20.08■□□□□ 0.81
CLK2-201ENST00000355560 VN1R17PQ8TDU5 208 aa20.08■□□□□ 0.81
CLK2-201ENST00000355560 ELOVL1Q9BW60 279 aa20.08■□□□□ 0.81
CLK2-201ENST00000355560 KLK9Q9UKQ9 250 aa20.08■□□□□ 0.81
CLK2-201ENST00000355560 ZANQ9Y493 2812 aa20.08■□□□□ 0.8
CLK2-201ENST00000355560 NBPF19A0A087WUL8 3843 aa20.08■□□□□ 0.8
CLK2-201ENST00000355560 FOLR2P14207 255 aa20.08■□□□□ 0.8
CLK2-201ENST00000355560 BLNKQ8WV28 456 aa20.08■□□□□ 0.8
CLK2-201ENST00000355560 PSMG3-AS1Q96PY0 264 aa20.08■□□□□ 0.8
CLK2-201ENST00000355560 TRBV9A0A0B4J1U6 114 aa20.07■□□□□ 0.8
CLK2-201ENST00000355560 PITPNC1Q9UKF7 332 aa20.07■□□□□ 0.8
CLK2-201ENST00000355560 WI2-2373I1.2A0A1W2PRP0 233 aa20.06■□□□□ 0.8
CLK2-201ENST00000355560 SCGB2A1O75556 95 aa20.06■□□□□ 0.8
CLK2-201ENST00000355560 FCGR2BP31994 310 aaPredicted RBP20.06■□□□□ 0.8
CLK2-201ENST00000355560 C2CD4CQ8TF44 421 aa20.06■□□□□ 0.8
CLK2-201ENST00000355560 MBD6Q96DN6 1003 aa20.06■□□□□ 0.8
CLK2-201ENST00000355560 TXN2Q99757 166 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms