RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 B4GALT7Q9UBV7 327 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 SMAD5-AS1Q9Y6J3 95 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 ABCA13Q86UQ4 5058 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 P04436 131 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 GPX1P07203 203 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 HINT1P49773 126 aaPredicted RBP4.32□□□□□ -1.72
CD47-201ENST00000355354 TMEM178AQ8NBL3 297 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 OR1P1Q8NH06 330 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 APOBEC3DQ96AK3 386 aaPredicted RBP4.32□□□□□ -1.72
CD47-201ENST00000355354 HERC2O95714 4834 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 IGKV3-7A0A075B6H7 116 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 DIRC3C9JPN6 131 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 SNAPC5O75971 98 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 TSKUQ8WUA8 353 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 NOL4LQ96MY1 436 aaPredicted RBP4.32□□□□□ -1.72
CD47-201ENST00000355354 P2RX4Q99571 388 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 HSD17B10Q99714 261 aaKnown RBP4.32□□□□□ -1.72
CD47-201ENST00000355354 SRSF8Q9BRL6 282 aaKnown RBP4.32□□□□□ -1.72
CD47-201ENST00000355354 MLST8Q9BVC4 326 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 SFXN3Q9BWM7 321 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 METTL9Q9H1A3 318 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 SRD5A3Q9H8P0 318 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 ITGB1BP2Q9UKP3 347 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 MDFIC2A0A1B0GVS7 189 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 GGCTO75223 188 aaKnown RBP4.32□□□□□ -1.72
CD47-201ENST00000355354 TRGV3P03979 118 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 SRIP30626 198 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 TMEM234Q8WY98 164 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 FAM104AQ969W3 186 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 OPRPNQ99935 248 aaPredicted RBP4.32□□□□□ -1.72
CD47-201ENST00000355354 KLK15Q9H2R5 256 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 TBL2Q9Y4P3 447 aaKnown RBP4.32□□□□□ -1.72
CD47-201ENST00000355354 IGLC7A0M8Q6 106 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 VAMP5O95183 116 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 CST2P09228 141 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 CD99P14209 185 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 PDLIM4P50479 330 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 PAX8Q06710 450 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 C18orf65Q6ZTR6 163 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 MRI1Q9BV20 369 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 SLC25A15Q9Y619 301 aa4.32□□□□□ -1.72
CD47-201ENST00000355354 SRRM5B3KS81 715 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 AMY1AP04745 511 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 DTYMKP23919 212 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 TMEM211Q6ICI0 200 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 IL34Q6ZMJ4 242 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 C15orf40Q8WUR7 153 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 CCL17Q92583 94 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 DNAJC30Q96LL9 226 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 URM1Q9BTM9 101 aaKnown RBP4.31□□□□□ -1.72
CD47-201ENST00000355354 RNASE2P10153 161 aaKnown RBP4.31□□□□□ -1.72
CD47-201ENST00000355354 EGR2P11161 476 aaPredicted RBP4.31□□□□□ -1.72
CD47-201ENST00000355354 MALLQ13021 153 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.31□□□□□ -1.72
CD47-201ENST00000355354 C15orf54Q8N8G6 183 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 BLNKQ8WV28 456 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 LRRC29Q8WV35 223 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 TCTEX1D2Q8WW35 142 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 ZNF586Q9NXT0 402 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 WIPI2Q9Y4P8 454 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 DEGS1O15121 323 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 STAG3L2P0CL84 134 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 STAG3L3P0CL85 134 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 IGLC2P0DOY2 106 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 IGLC3P0DOY3 106 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 RPP30P78346 268 aaKnown RBP4.31□□□□□ -1.72
CD47-201ENST00000355354 TMEM200BQ69YZ2 307 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 OR10P1Q8NGE3 313 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 PTH2Q96A98 100 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 DKKL1Q9UK85 242 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 MGST3O14880 152 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 COX6B1P14854 86 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 PMCHP20382 165 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 NTF3P20783 257 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 FGF7P21781 194 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 PRDX2P32119 198 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 MBNL2Q5VZF2 373 aaKnown RBP4.31□□□□□ -1.72
CD47-201ENST00000355354 DNM1P34Q6PK57 102 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 UNQ9165/PRO28630Q6UXU0 137 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 NUP35Q8NFH5 326 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 SPSB1Q96BD6 273 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 FXYD5Q96DB9 178 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 IGF2BP2-AS1Q96M15 143 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 VGLL1Q99990 258 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 SLC25A33Q9BSK2 321 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 ZNF331Q9NQX6 463 aaPredicted RBP4.31□□□□□ -1.72
CD47-201ENST00000355354 TMEM106BQ9NUM4 274 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 RPH3ALQ9UNE2 315 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 POLDIP2Q9Y2S7 368 aa4.31□□□□□ -1.72
CD47-201ENST00000355354 PIGBOS1A0A0B4J2F0 54 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 CBY3A6NI87 242 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 TMEM210A6NLX4 147 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 NUDT19A8MXV4 375 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 H0Y980 276 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 MYCNOSP40205 109 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 TWIST1Q15672 202 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 PPP1R35Q8TAP8 253 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 APH1AQ96BI3 265 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 FANCD2OSQ96PS1 177 aa4.3□□□□□ -1.72
CD47-201ENST00000355354 DUX3Q96PT4 197 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms