RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 LOC107986453A0A1B0GWG9 222 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 A8MZ25 164 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 C12orf77C9JDV5 145 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 AGPAT2O15120 278 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 ATP6V0E1O15342 81 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 HBE1P02100 147 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 PTHLHP12272 177 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 IL3RAP26951 378 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 P2RY1P47900 373 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 CAMLGP49069 296 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 ZNF85Q03923 595 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 LRRC37A5PQ49AS3 106 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 ZNF343Q6P1L6 599 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 SPSB1Q96BD6 273 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 PINX1Q96BK5 328 aaKnown RBP8.6□□□□□ -1.03
RTN3-204ENST00000354497 MS4A10Q96PG2 267 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 SCGB3A2Q96PL1 93 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 RYR1P21817 5038 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 MAP1LC3B2A6NCE7 125 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 MSGN1A6NI15 193 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 GEMIN2O14893 280 aaKnown RBP8.59□□□□□ -1.03
RTN3-204ENST00000354497 RBFOX2O43251 390 aaKnown RBP eCLIP8.59□□□□□ -1.03
RTN3-204ENST00000354497 IGHV3-11P01762 117 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 CGB3P0DN86 165 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 CGB7P0DN87 165 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 PPIFP30405 207 aaKnown RBP8.59□□□□□ -1.03
RTN3-204ENST00000354497 PPP1R1AQ13522 171 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 MMDQ15546 238 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 ECSCRQ19T08 205 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 C2orf76Q3KRA6 126 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 SLC22A6Q4U2R8 563 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 TMEM128Q5BJH2 165 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 OR4A47Q6IF82 309 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 NIT1Q86X76 327 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 UBALD1Q8TB05 177 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 RTN4IP1Q8WWV3 396 aaPredicted RBP8.59□□□□□ -1.03
RTN3-204ENST00000354497 FGGYQ96C11 551 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 ADAT3Q96EY9 351 aaPredicted RBP8.59□□□□□ -1.03
RTN3-204ENST00000354497 AGMATQ9BSE5 352 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 CABLES2Q9BTV7 478 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 MAP1LC3BQ9GZQ8 125 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 Q9N2K0 584 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 PEF1Q9UBV8 284 aaKnown RBP8.59□□□□□ -1.03
RTN3-204ENST00000354497 MRPS28Q9Y2Q9 187 aaKnown RBP8.59□□□□□ -1.03
RTN3-204ENST00000354497 SORL1Q92673 2214 aa8.59□□□□□ -1.03
RTN3-204ENST00000354497 IGHV3-43A0A0B4J1X8 118 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 TRBV5-5A0A0J9YX44 114 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 OR4C45A6NMZ5 311 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 ZNF727A8MUV8 499 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 OR11H12B2RN74 326 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 SDCBPO00560 298 aaPredicted RBP8.58□□□□□ -1.04
RTN3-204ENST00000354497 IGLV1-40P01703 118 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 MBPP02686 304 aaPredicted RBP8.58□□□□□ -1.04
RTN3-204ENST00000354497 LGALS1P09382 135 aaKnown RBP8.58□□□□□ -1.04
RTN3-204ENST00000354497 IGHV3-43DP0DP04 118 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 CNTFRP26992 372 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 OR51T1Q8NGJ9 327 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 CST11Q9H112 138 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 KIAA2026Q5HYC2 2103 aa8.58□□□□□ -1.04
RTN3-204ENST00000354497 ZNF705FA8MVS1 300 aaPredicted RBP8.57□□□□□ -1.04
RTN3-204ENST00000354497 NPIPB11E5RHQ5 1161 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 SFT2D2O95562 160 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 ZNF705DP0CH99 300 aaPredicted RBP8.57□□□□□ -1.04
RTN3-204ENST00000354497 ZNF705BP0CI00 300 aaPredicted RBP8.57□□□□□ -1.04
RTN3-204ENST00000354497 IGLC2P0DOY2 106 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 IGLC3P0DOY3 106 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 RPL12P30050 165 aaKnown RBP8.57□□□□□ -1.04
RTN3-204ENST00000354497 TFPI2P48307 235 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 CNN1P51911 297 aaKnown RBP8.57□□□□□ -1.04
RTN3-204ENST00000354497 GTSCR1Q86UQ5 136 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 CMTM1Q8IZ96 169 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 OR13C9Q8NGT0 318 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 PLPPR1Q8TBJ4 325 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 FLYWCH2Q96CP2 140 aaKnown RBP8.57□□□□□ -1.04
RTN3-204ENST00000354497 C10orf35Q96D05 121 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 ZNF580Q9UK33 172 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 OR51B2Q9Y5P1 312 aa8.57□□□□□ -1.04
RTN3-204ENST00000354497 TRBV5-7A0A0A0MS05 114 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 OR7C2O60412 319 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 IGLV1-51P01701 117 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 BLVRBP30043 206 aaPredicted RBP8.56□□□□□ -1.04
RTN3-204ENST00000354497 TPPP2P59282 170 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 SRPXP78539 464 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 ODF1Q14990 250 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 TMEM41BQ5BJD5 291 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 ZNF66Q6ZN08 573 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 TMEM144Q7Z5S9 345 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 SELENOHQ8IZQ5 122 aaKnown RBP8.56□□□□□ -1.04
RTN3-204ENST00000354497 TCTEX1D1Q8N7M0 179 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 OR52L2PQ8NGH6 319 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 PELI1Q96FA3 418 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 LINC00574Q9H8X3 128 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 SDF2L1Q9HCN8 221 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 OR2S2Q9NQN1 319 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 DNAH10Q8IVF4 4471 aa8.56□□□□□ -1.04
RTN3-204ENST00000354497 TRAV24A0A0B4J272 114 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 J3QLW9 94 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 TSPAN13O95857 204 aa8.55□□□□□ -1.04
RTN3-204ENST00000354497 AKR1C4P17516 323 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms