RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 LY6LH3BQJ8 138 aa17.38■□□□□ 0.37
SHMT1-202ENST00000352886 LIPFP07098 398 aa17.38■□□□□ 0.37
SHMT1-202ENST00000352886 MYCNOSP40205 109 aa17.38■□□□□ 0.37
SHMT1-202ENST00000352886 LINC00310P59036 64 aa17.38■□□□□ 0.37
SHMT1-202ENST00000352886 ADORA2A-AS1P86434 159 aa17.38■□□□□ 0.37
SHMT1-202ENST00000352886 RELQ04864 619 aaPredicted RBP17.38■□□□□ 0.37
SHMT1-202ENST00000352886 PLGLAQ15195 96 aa17.38■□□□□ 0.37
SHMT1-202ENST00000352886 NBASA2RRP1 2371 aa17.38■□□□□ 0.37
SHMT1-202ENST00000352886 SERF1AO75920 110 aa17.37■□□□□ 0.37
SHMT1-202ENST00000352886 MS4A10Q96PG2 267 aa17.37■□□□□ 0.37
SHMT1-202ENST00000352886 A8MWP6 167 aa17.37■□□□□ 0.37
SHMT1-202ENST00000352886 HYPMO75409 117 aa17.37■□□□□ 0.37
SHMT1-202ENST00000352886 NUTF2P61970 127 aaKnown RBP17.37■□□□□ 0.37
SHMT1-202ENST00000352886 KLRB1Q12918 225 aa17.37■□□□□ 0.37
SHMT1-202ENST00000352886 LDLRAD2Q5SZI1 272 aa17.37■□□□□ 0.37
SHMT1-202ENST00000352886 WDR73Q6P4I2 378 aa17.37■□□□□ 0.37
SHMT1-202ENST00000352886 FAM168AQ92567 244 aa17.37■□□□□ 0.37
SHMT1-202ENST00000352886 SSBP3Q9BWW4 388 aaPredicted RBP17.37■□□□□ 0.37
SHMT1-202ENST00000352886 SCGB1D1O95968 90 aa17.36■□□□□ 0.37
SHMT1-202ENST00000352886 MT-ND6P03923 174 aa17.36■□□□□ 0.37
SHMT1-202ENST00000352886 UCNP55089 124 aa17.36■□□□□ 0.37
SHMT1-202ENST00000352886 MRPL54Q6P161 138 aaKnown RBP17.36■□□□□ 0.37
SHMT1-202ENST00000352886 TMEM136Q6ZRR5 245 aa17.36■□□□□ 0.37
SHMT1-202ENST00000352886 LY6G5BQ8NDX9 201 aa17.36■□□□□ 0.37
SHMT1-202ENST00000352886 RAB1BQ9H0U4 201 aa17.36■□□□□ 0.37
SHMT1-202ENST00000352886 F2Z2F3 143 aa17.36■□□□□ 0.37
SHMT1-202ENST00000352886 TIMM23O14925 209 aa17.36■□□□□ 0.37
SHMT1-202ENST00000352886 BAGE3Q86Y29 109 aa17.36■□□□□ 0.37
SHMT1-202ENST00000352886 SLC25A5P05141 298 aaKnown RBP17.35■□□□□ 0.37
SHMT1-202ENST00000352886 PAX2Q02962 417 aa17.35■□□□□ 0.37
SHMT1-202ENST00000352886 LEMD1Q68G75 181 aa17.35■□□□□ 0.37
SHMT1-202ENST00000352886 EPDR1Q9UM22 224 aa17.35■□□□□ 0.37
SHMT1-202ENST00000352886 PGPA6NDG6 321 aa17.35■□□□□ 0.37
SHMT1-202ENST00000352886 NBEAP1P0C6P0 100 aa17.35■□□□□ 0.37
SHMT1-202ENST00000352886 ARF6P62330 175 aa17.35■□□□□ 0.37
SHMT1-202ENST00000352886 RNF5Q99942 180 aa17.35■□□□□ 0.37
SHMT1-202ENST00000352886 ESDP10768 282 aa17.34■□□□□ 0.37
SHMT1-202ENST00000352886 SFTPCP11686 197 aa17.34■□□□□ 0.37
SHMT1-202ENST00000352886 TPPP2P59282 170 aa17.34■□□□□ 0.37
SHMT1-202ENST00000352886 Q0VG73 95 aa17.34■□□□□ 0.37
SHMT1-202ENST00000352886 CYB5R2Q6BCY4 276 aa17.34■□□□□ 0.37
SHMT1-202ENST00000352886 PRR27Q6MZM9 219 aa17.34■□□□□ 0.37
SHMT1-202ENST00000352886 NDUFAF3Q9BU61 184 aa17.34■□□□□ 0.37
SHMT1-202ENST00000352886 PPP1R14DQ9NXH3 145 aa17.34■□□□□ 0.37
SHMT1-202ENST00000352886 AMY1AP04745 511 aa17.33■□□□□ 0.37
SHMT1-202ENST00000352886 UBE2G1P62253 170 aa17.33■□□□□ 0.37
SHMT1-202ENST00000352886 MMDQ15546 238 aa17.33■□□□□ 0.37
SHMT1-202ENST00000352886 TMEM183BQ1AE95 376 aa17.33■□□□□ 0.37
SHMT1-202ENST00000352886 KIAA1644Q3SXP7 199 aa17.33■□□□□ 0.37
SHMT1-202ENST00000352886 COX19Q49B96 90 aa17.33■□□□□ 0.37
SHMT1-202ENST00000352886 TPTE2P1Q5T6R2 138 aa17.33■□□□□ 0.37
SHMT1-202ENST00000352886 FAM231DQ6ZW35 169 aa17.33■□□□□ 0.37
SHMT1-202ENST00000352886 SGK494Q96LW2 274 aa17.33■□□□□ 0.37
SHMT1-202ENST00000352886 NOL4LQ96MY1 436 aaPredicted RBP17.33■□□□□ 0.37
SHMT1-202ENST00000352886 RPH3ALQ9UNE2 315 aa17.33■□□□□ 0.37
SHMT1-202ENST00000352886 IZUMO1RA6ND01 250 aa17.33■□□□□ 0.36
SHMT1-202ENST00000352886 GP9P14770 177 aa17.33■□□□□ 0.36
SHMT1-202ENST00000352886 HTR1DP28221 377 aa17.33■□□□□ 0.36
SHMT1-202ENST00000352886 PLP1P60201 277 aa17.33■□□□□ 0.36
SHMT1-202ENST00000352886 PAFAH1B2P68402 229 aa17.33■□□□□ 0.36
SHMT1-202ENST00000352886 TIMD4Q96H15 378 aa17.33■□□□□ 0.36
SHMT1-202ENST00000352886 HILPDAQ9Y5L2 63 aa17.33■□□□□ 0.36
SHMT1-202ENST00000352886 CNIH1O95406 144 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 IGLC1P0CG04 106 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 NUDT10Q8NFP7 164 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 NUDT11Q96G61 164 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 GNB4Q9HAV0 340 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 H3BTX0 84 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 I3L2K1 104 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 PSG1P11464 419 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 MBD6Q96DN6 1003 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 COL25A1Q9BXS0 654 aaPredicted RBP17.32■□□□□ 0.36
SHMT1-202ENST00000352886 WNT10AQ9GZT5 417 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 CBLN4Q9NTU7 201 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 NAGKQ9UJ70 344 aa17.32■□□□□ 0.36
SHMT1-202ENST00000352886 LYZP61626 148 aa17.31■□□□□ 0.36
SHMT1-202ENST00000352886 ATRXP46100 2492 aa17.31■□□□□ 0.36
SHMT1-202ENST00000352886 EREGO14944 169 aa17.31■□□□□ 0.36
SHMT1-202ENST00000352886 HLA-DQA1P01909 254 aa17.31■□□□□ 0.36
SHMT1-202ENST00000352886 CD33P20138 364 aa17.31■□□□□ 0.36
SHMT1-202ENST00000352886 Q6ZWC4 215 aa17.31■□□□□ 0.36
SHMT1-202ENST00000352886 IGFBPL1Q8WX77 278 aa17.31■□□□□ 0.36
SHMT1-202ENST00000352886 DPM3Q9P2X0 92 aa17.31■□□□□ 0.36
SHMT1-202ENST00000352886 HIGD1AQ9Y241 93 aa17.31■□□□□ 0.36
SHMT1-202ENST00000352886 HRNRQ86YZ3 2850 aaPredicted RBP17.31■□□□□ 0.36
SHMT1-202ENST00000352886 KLRD1Q13241 179 aa17.3■□□□□ 0.36
SHMT1-202ENST00000352886 OR11H6Q8NGC7 330 aa17.3■□□□□ 0.36
SHMT1-202ENST00000352886 ATG101Q9BSB4 218 aa17.3■□□□□ 0.36
SHMT1-202ENST00000352886 RASL11BQ9BPW5 248 aa17.3■□□□□ 0.36
SHMT1-202ENST00000352886 C7orf69Q9H7B7 122 aa17.3■□□□□ 0.36
SHMT1-202ENST00000352886 CD24P25063 80 aa17.29■□□□□ 0.36
SHMT1-202ENST00000352886 GRAMD2BQ96HH9 432 aa17.29■□□□□ 0.36
SHMT1-202ENST00000352886 SAMD10Q9BYL1 202 aa17.29■□□□□ 0.36
SHMT1-202ENST00000352886 ZNF331Q9NQX6 463 aaPredicted RBP17.29■□□□□ 0.36
SHMT1-202ENST00000352886 KLF12Q9Y4X4 402 aa17.29■□□□□ 0.36
SHMT1-202ENST00000352886 BMPR1BO00238 502 aa17.29■□□□□ 0.36
SHMT1-202ENST00000352886 NBR2O15453 112 aa17.29■□□□□ 0.36
SHMT1-202ENST00000352886 G0S2P27469 103 aa17.29■□□□□ 0.36
SHMT1-202ENST00000352886 C11orf71Q6IPW1 123 aa17.29■□□□□ 0.36
SHMT1-202ENST00000352886 C5orf17Q8NAS9 161 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms