RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 DFFBO76075 338 aa16.45■□□□□ 0.22
SNX3-202ENST00000349379 HNRNPCP07910 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
SNX3-202ENST00000349379 ZNF90Q03938 601 aa16.45■□□□□ 0.22
SNX3-202ENST00000349379 IL15RAQ13261 267 aa16.45■□□□□ 0.22
SNX3-202ENST00000349379 OR51G1Q8NGK1 321 aa16.45■□□□□ 0.22
SNX3-202ENST00000349379 CITED4Q96RK1 184 aa16.45■□□□□ 0.22
SNX3-202ENST00000349379 C11orf1Q9H5F2 150 aa16.45■□□□□ 0.22
SNX3-202ENST00000349379 C5orf51A6NDU8 294 aa16.44■□□□□ 0.22
SNX3-202ENST00000349379 SNRPGP15A8MWD9 76 aa16.44■□□□□ 0.22
SNX3-202ENST00000349379 INMT-MINDY4F8WBC2 141 aa16.44■□□□□ 0.22
SNX3-202ENST00000349379 PRAF2O60831 178 aa16.44■□□□□ 0.22
SNX3-202ENST00000349379 ACOT7LQ6ZUV0 252 aa16.44■□□□□ 0.22
SNX3-202ENST00000349379 GPN1Q9HCN4 374 aaPredicted RBP16.44■□□□□ 0.22
SNX3-202ENST00000349379 TENM3Q9P273 2699 aa16.44■□□□□ 0.22
SNX3-202ENST00000349379 TRAV2A0A0B4J234 112 aa16.43■□□□□ 0.22
SNX3-202ENST00000349379 C7orf66A4D0T2 115 aa16.43■□□□□ 0.22
SNX3-202ENST00000349379 FAM25EA8MYX2 175 aa16.43■□□□□ 0.22
SNX3-202ENST00000349379 K7EPK0 472 aa16.43■□□□□ 0.22
SNX3-202ENST00000349379 CCNKO75909 580 aa16.43■□□□□ 0.22
SNX3-202ENST00000349379 P2RY1P47900 373 aa16.43■□□□□ 0.22
SNX3-202ENST00000349379 GSG1LQ6UXU4 331 aa16.43■□□□□ 0.22
SNX3-202ENST00000349379 GLMPQ8WWB7 406 aa16.43■□□□□ 0.22
SNX3-202ENST00000349379 RNF125Q96EQ8 232 aa16.43■□□□□ 0.22
SNX3-202ENST00000349379 C16orf54Q6UWD8 224 aa16.42■□□□□ 0.22
SNX3-202ENST00000349379 NARS2Q96I59 477 aaKnown RBP16.42■□□□□ 0.22
SNX3-202ENST00000349379 RCHY1Q96PM5 261 aa16.42■□□□□ 0.22
SNX3-202ENST00000349379 ZMAT4Q9H898 229 aa16.42■□□□□ 0.22
SNX3-202ENST00000349379 UBQLN2Q9UHD9 624 aa16.42■□□□□ 0.22
SNX3-202ENST00000349379 IGKV3-7A0A075B6H7 116 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 FNDC10F2Z333 226 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 BUB3O43684 328 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 FABP1P07148 127 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 METTL15P1P0C7V9 234 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 PAFAH1B2P68402 229 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 OR8G2PQ6IF36 304 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 TMEM144Q7Z5S9 345 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 GRAMD2BQ96HH9 432 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 MS4A6AQ9H2W1 248 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 RABAC1Q9UI14 185 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 STAB2Q8WWQ8 2551 aa16.41■□□□□ 0.22
SNX3-202ENST00000349379 TFPI2P48307 235 aa16.4■□□□□ 0.22
SNX3-202ENST00000349379 DLK1P80370 383 aa16.4■□□□□ 0.22
SNX3-202ENST00000349379 GBGT1Q8N5D6 347 aa16.4■□□□□ 0.22
SNX3-202ENST00000349379 SPATA25Q9BR10 227 aa16.4■□□□□ 0.22
SNX3-202ENST00000349379 LSM5Q9Y4Y9 91 aaKnown RBP16.4■□□□□ 0.22
SNX3-202ENST00000349379 EIF2B2P49770 351 aaKnown RBP16.39■□□□□ 0.21
SNX3-202ENST00000349379 CMC4P56277 68 aaPredicted RBP16.39■□□□□ 0.21
SNX3-202ENST00000349379 AKR1C1Q04828 323 aa16.39■□□□□ 0.21
SNX3-202ENST00000349379 WWC2-AS2Q96NR7 200 aa16.39■□□□□ 0.21
SNX3-202ENST00000349379 MAP6D1Q9H9H5 199 aa16.39■□□□□ 0.21
SNX3-202ENST00000349379 LOC102724200A0A096LPH7 203 aaPredicted RBP16.38■□□□□ 0.21
SNX3-202ENST00000349379 K7EQG2 157 aa16.38■□□□□ 0.21
SNX3-202ENST00000349379 CFDP00746 253 aaPredicted RBP16.38■□□□□ 0.21
SNX3-202ENST00000349379 ARL16Q0P5N6 197 aa16.38■□□□□ 0.21
SNX3-202ENST00000349379 OR2F1Q13607 317 aa16.38■□□□□ 0.21
SNX3-202ENST00000349379 STPG3Q8N7X2 389 aa16.38■□□□□ 0.21
SNX3-202ENST00000349379 OR10P1Q8NGE3 313 aa16.38■□□□□ 0.21
SNX3-202ENST00000349379 GGTLC1Q9BX51 225 aa16.38■□□□□ 0.21
SNX3-202ENST00000349379 HELTA6NFD8 242 aa16.37■□□□□ 0.21
SNX3-202ENST00000349379 NUP62P37198 522 aaPredicted RBP16.37■□□□□ 0.21
SNX3-202ENST00000349379 LYZP61626 148 aa16.37■□□□□ 0.21
SNX3-202ENST00000349379 RAB32Q13637 225 aa16.37■□□□□ 0.21
SNX3-202ENST00000349379 TMEM182Q6ZP80 229 aaPredicted RBP16.37■□□□□ 0.21
SNX3-202ENST00000349379 FAM24BQ8N5W8 94 aa16.37■□□□□ 0.21
SNX3-202ENST00000349379 DCANP1Q8TF63 244 aa16.37■□□□□ 0.21
SNX3-202ENST00000349379 PBDC1Q9BVG4 233 aa16.37■□□□□ 0.21
SNX3-202ENST00000349379 AGRNO00468 2067 aa16.36■□□□□ 0.21
SNX3-202ENST00000349379 L7N2F9 121 aa16.36■□□□□ 0.21
SNX3-202ENST00000349379 DNASE2O00115 360 aaPredicted RBP16.36■□□□□ 0.21
SNX3-202ENST00000349379 RPL11P62913 178 aaKnown RBP16.36■□□□□ 0.21
SNX3-202ENST00000349379 VAMP2P63027 116 aa16.36■□□□□ 0.21
SNX3-202ENST00000349379 WFDC3Q8IUB2 231 aa16.36■□□□□ 0.21
SNX3-202ENST00000349379 GGACTQ9BVM4 153 aa16.36■□□□□ 0.21
SNX3-202ENST00000349379 NPVFQ9HCQ7 196 aa16.36■□□□□ 0.21
SNX3-202ENST00000349379 GOSR2O14653 212 aa16.35■□□□□ 0.21
SNX3-202ENST00000349379 AP2S1P53680 142 aaPredicted RBP16.35■□□□□ 0.21
SNX3-202ENST00000349379 RRAS2P62070 204 aaPredicted RBP16.35■□□□□ 0.21
SNX3-202ENST00000349379 APRG1Q8IVJ8 170 aa16.35■□□□□ 0.21
SNX3-202ENST00000349379 STXBP6Q8NFX7 210 aa16.35■□□□□ 0.21
SNX3-202ENST00000349379 NMES1Q9C002 83 aa16.35■□□□□ 0.21
SNX3-202ENST00000349379 SLC45A2Q9UMX9 530 aa16.35■□□□□ 0.21
SNX3-202ENST00000349379 SMCO3A2RU48 225 aa16.34■□□□□ 0.21
SNX3-202ENST00000349379 DEDDO75618 318 aa16.34■□□□□ 0.21
SNX3-202ENST00000349379 SIX6O95475 246 aa16.34■□□□□ 0.21
SNX3-202ENST00000349379 PVALBP20472 110 aaPredicted RBP16.34■□□□□ 0.21
SNX3-202ENST00000349379 GATA2P23769 480 aaPredicted RBP16.34■□□□□ 0.21
SNX3-202ENST00000349379 S100A10P60903 97 aa16.34■□□□□ 0.21
SNX3-202ENST00000349379 ZNF124Q15973 351 aa16.34■□□□□ 0.21
SNX3-202ENST00000349379 CYP2G1PQ6ZSU1 146 aa16.34■□□□□ 0.21
SNX3-202ENST00000349379 BPIFCQ8NFQ6 507 aa16.34■□□□□ 0.21
SNX3-202ENST00000349379 LYRM2Q9NU23 88 aaPredicted RBP16.34■□□□□ 0.21
SNX3-202ENST00000349379 MGAT4CQ9UBM8 478 aa16.34■□□□□ 0.21
SNX3-202ENST00000349379 PFDN2Q9UHV9 154 aa16.34■□□□□ 0.21
SNX3-202ENST00000349379 FAM24AA6NFZ4 105 aa16.33■□□□□ 0.2
SNX3-202ENST00000349379 PTTG1O95997 202 aa16.33■□□□□ 0.2
SNX3-202ENST00000349379 C1orf194Q5T5A4 169 aa16.33■□□□□ 0.2
SNX3-202ENST00000349379 SIGLEC15Q6ZMC9 328 aa16.33■□□□□ 0.2
SNX3-202ENST00000349379 RETNQ9HD89 108 aa16.33■□□□□ 0.2
SNX3-202ENST00000349379 CAV2P51636 162 aa16.32■□□□□ 0.2
SNX3-202ENST00000349379 DEFB131AP59861 70 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms