RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 PMCHL2Q9BQD1 86 aa12.69□□□□□ -0.38
PTPRO-202ENST00000348962 HIGD1CA8MV81 97 aa12.69□□□□□ -0.38
PTPRO-202ENST00000348962 CHCHD5Q9BSY4 110 aa12.69□□□□□ -0.38
PTPRO-202ENST00000348962 ZNF329Q86UD4 541 aa12.69□□□□□ -0.38
PTPRO-202ENST00000348962 KLHDC3Q9BQ90 382 aa12.69□□□□□ -0.38
PTPRO-202ENST00000348962 SBF1O95248 1867 aa12.69□□□□□ -0.38
PTPRO-202ENST00000348962 A0A087WX48 190 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 NAPSAO96009 420 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 TCF23Q7RTU1 214 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 OR9G4Q8NGQ1 327 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 F11RQ9Y624 299 aaKnown RBP12.68□□□□□ -0.38
PTPRO-202ENST00000348962 DTX1Q86Y01 620 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 PNRC2Q9NPJ4 139 aaKnown RBP12.68□□□□□ -0.38
PTPRO-202ENST00000348962 IZUMO1RA6ND01 250 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 EFNB3Q15768 340 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 PRSS33Q8NF86 280 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 RNF222A6NCQ9 220 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 GAGE10A6NGK3 116 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 HGFACQ04756 655 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 C9orf139Q6ZV77 190 aa12.68□□□□□ -0.38
PTPRO-202ENST00000348962 H0YJW9 148 aa12.67□□□□□ -0.38
PTPRO-202ENST00000348962 ZNF688P0C7X2 276 aa12.67□□□□□ -0.38
PTPRO-202ENST00000348962 PSG1P11464 419 aa12.67□□□□□ -0.38
PTPRO-202ENST00000348962 COTL1Q14019 142 aa12.67□□□□□ -0.38
PTPRO-202ENST00000348962 IGKV1D-17A0A075B6S4 117 aa12.67□□□□□ -0.38
PTPRO-202ENST00000348962 PPBPP02775 128 aa12.67□□□□□ -0.38
PTPRO-202ENST00000348962 FOXC2Q99958 501 aa12.67□□□□□ -0.38
PTPRO-202ENST00000348962 ZNF415Q09FC8 603 aa12.67□□□□□ -0.38
PTPRO-202ENST00000348962 THSD7BQ9C0I4 1608 aa12.67□□□□□ -0.38
PTPRO-202ENST00000348962 FAM223BA6NKX1 122 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 F8VVB4 439 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 F8VWA3 439 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 LYPD2Q6UXB3 125 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 FAM223AQ8IWN6 122 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 TMEM183AQ8IXX5 376 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 Q96MF0 132 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 SIGLEC9Q9Y336 463 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 PTPRQQ9UMZ3 2332 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 ACACBO00763 2458 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 F2Z2F3 143 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 GHRHP01286 108 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 EFNB1P98172 346 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 CEACAM8P31997 349 aaPredicted RBP12.66□□□□□ -0.38
PTPRO-202ENST00000348962 NUDT10Q8NFP7 164 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 TRBV6-6A0A0A6YYG2 114 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 FOXL2NBQ6ZUU3 175 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 TTC9CQ8N5M4 171 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 BEX4Q9NWD9 120 aaPredicted RBP12.66□□□□□ -0.38
PTPRO-202ENST00000348962 DOCK10Q96BY6 2186 aa12.66□□□□□ -0.38
PTPRO-202ENST00000348962 DICER1Q9UPY3 1922 aaKnown RBP12.65□□□□□ -0.38
PTPRO-202ENST00000348962 UBE2E1P51965 193 aa12.65□□□□□ -0.38
PTPRO-202ENST00000348962 LY6G6EA0A0G2JKS1 128 aa12.65□□□□□ -0.38
PTPRO-202ENST00000348962 PIP4P1Q86T03 277 aa12.65□□□□□ -0.38
PTPRO-202ENST00000348962 U3KQA8 63 aa12.65□□□□□ -0.38
PTPRO-202ENST00000348962 PMS2P5A8MQ11 134 aa12.65□□□□□ -0.38
PTPRO-202ENST00000348962 KLF17Q5JT82 389 aaPredicted RBP12.65□□□□□ -0.38
PTPRO-202ENST00000348962 TREML4Q6UXN2 200 aa12.65□□□□□ -0.38
PTPRO-202ENST00000348962 TRGV9Q99603 122 aa12.65□□□□□ -0.38
PTPRO-202ENST00000348962 RNF126Q9BV68 326 aa12.65□□□□□ -0.38
PTPRO-202ENST00000348962 RPL15P61313 204 aaKnown RBP12.65□□□□□ -0.38
PTPRO-202ENST00000348962 CYSLTR1Q9Y271 337 aa12.65□□□□□ -0.38
PTPRO-202ENST00000348962 K7ERU9 68 aa12.64□□□□□ -0.39
PTPRO-202ENST00000348962 WFDC12Q8WWY7 111 aa12.64□□□□□ -0.39
PTPRO-202ENST00000348962 COQ2Q96H96 371 aa12.64□□□□□ -0.39
PTPRO-202ENST00000348962 OSTCQ9NRP0 149 aa12.64□□□□□ -0.39
PTPRO-202ENST00000348962 PEF1Q9UBV8 284 aaKnown RBP12.64□□□□□ -0.39
PTPRO-202ENST00000348962 RBMY1BA6NDE4 496 aaKnown RBP12.64□□□□□ -0.39
PTPRO-202ENST00000348962 RBMY1EA6NEQ0 496 aaKnown RBP12.64□□□□□ -0.39
PTPRO-202ENST00000348962 RBMY1DP0C7P1 496 aaKnown RBP12.64□□□□□ -0.39
PTPRO-202ENST00000348962 RBMY1A1P0DJD3 496 aaKnown RBP12.64□□□□□ -0.39
PTPRO-202ENST00000348962 RBMY1CP0DJD4 496 aa12.64□□□□□ -0.39
PTPRO-202ENST00000348962 CR1LQ2VPA4 569 aa12.64□□□□□ -0.39
PTPRO-202ENST00000348962 Q6P435 159 aa12.64□□□□□ -0.39
PTPRO-202ENST00000348962 RCHY1Q96PM5 261 aa12.64□□□□□ -0.39
PTPRO-202ENST00000348962 SEPSECSQ9HD40 501 aaKnown RBP12.64□□□□□ -0.39
PTPRO-202ENST00000348962 RPL35AP18077 110 aaKnown RBP12.63□□□□□ -0.39
PTPRO-202ENST00000348962 TRBV7-9A0A0J9YWB2 115 aa12.63□□□□□ -0.39
PTPRO-202ENST00000348962 LHFPL1Q86WI0 220 aa12.63□□□□□ -0.39
PTPRO-202ENST00000348962 SLC25A39Q9BZJ4 359 aaPredicted RBP12.63□□□□□ -0.39
PTPRO-202ENST00000348962 NXT2Q9NPJ8 142 aaKnown RBP12.63□□□□□ -0.39
PTPRO-202ENST00000348962 SRSF1Q07955 248 aaKnown RBP eCLIP12.63□□□□□ -0.39
PTPRO-202ENST00000348962 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
PTPRO-202ENST00000348962 JKAMPQ9P055 326 aa12.63□□□□□ -0.39
PTPRO-202ENST00000348962 PPIFP30405 207 aaKnown RBP12.63□□□□□ -0.39
PTPRO-202ENST00000348962 RPRMLQ8N4K4 120 aa12.63□□□□□ -0.39
PTPRO-202ENST00000348962 GFI1Q99684 422 aa12.63□□□□□ -0.39
PTPRO-202ENST00000348962 FER1L5A0AVI2 2057 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 NPIPB5A8MRT5 1133 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 ORMDL2Q53FV1 153 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 ATOH7Q8N100 152 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 MED13LQ71F56 2210 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 ZNF407Q9C0G0 2248 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 LINC01549A6NIU2 74 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 ZNF98A6NK75 572 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 RPL36AP83881 106 aaKnown RBP12.62□□□□□ -0.39
PTPRO-202ENST00000348962 ACTL10Q5JWF8 245 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 RPL36ALQ969Q0 106 aaKnown RBP12.62□□□□□ -0.39
PTPRO-202ENST00000348962 GGTLC1Q9BX51 225 aa12.62□□□□□ -0.39
PTPRO-202ENST00000348962 ADARB2-AS1A8MUL3 147 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms