RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 S100A12P80511 92 aa11.15□□□□□ -0.62
CDK5RAP1-202ENST00000346416 TIGITQ495A1 244 aa11.15□□□□□ -0.62
CDK5RAP1-202ENST00000346416 Q8N9W7 124 aa11.15□□□□□ -0.62
CDK5RAP1-202ENST00000346416 FXYD5Q96DB9 178 aa11.15□□□□□ -0.62
CDK5RAP1-202ENST00000346416 RBM14Q96PK6 669 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP1-202ENST00000346416 RASL11BQ9BPW5 248 aa11.15□□□□□ -0.62
CDK5RAP1-202ENST00000346416 C1RLQ9NZP8 487 aa11.15□□□□□ -0.62
CDK5RAP1-202ENST00000346416 IGHV4-30-2A0A087WSY4 118 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HELTA6NFD8 242 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 C9JCJ5 164 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 IGKV1-17P01599 117 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 SFRP2Q96HF1 295 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 FANCD2OSQ96PS1 177 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 IGHV7-81A0A0B4J1V7 117 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 TRGC2P03986 189 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 SNRPCP09234 159 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 TTC9CQ8N5M4 171 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 STXBP6Q8NFX7 210 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 NRGNQ92686 78 aa11.14□□□□□ -0.63
CDK5RAP1-202ENST00000346416 IGLV11-55A0A075B6I3 123 aa11.13□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HOXA5P20719 270 aa11.13□□□□□ -0.63
CDK5RAP1-202ENST00000346416 LYZP61626 148 aa11.13□□□□□ -0.63
CDK5RAP1-202ENST00000346416 CLEC12BQ2HXU8 276 aa11.13□□□□□ -0.63
CDK5RAP1-202ENST00000346416 PYGO2Q9BRQ0 406 aa11.13□□□□□ -0.63
CDK5RAP1-202ENST00000346416 CSMD2Q7Z408 3487 aa11.13□□□□□ -0.63
CDK5RAP1-202ENST00000346416 MDFIC2A0A1B0GVS7 189 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 K7EN84 100 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 PPP1R2P9O14990 202 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 RD3LP0DJH9 198 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 EGR2P11161 476 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIGD1AQ9Y241 93 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 LY96Q9Y6Y9 160 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 S4R3C0 116 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 ZFHX3Q15911 3703 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 IGHV3OR16-10A0A075B7F0 116 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST1H2BKO60814 126 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HLA-DRB1P01911 266 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST1H2BJP06899 126 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST1H2BOP23527 126 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST1H2BBP33778 126 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 SRP14P37108 136 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 GNG4P50150 75 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 NDUFA6P56556 154 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST1H2BDP58876 126 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST1H2BCP62807 126 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST2H2BEQ16778 126 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 CENPWQ5EE01 88 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 LEMD1Q68G75 181 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 TEX38Q6PEX7 206 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST1H2BHQ93079 126 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST1H2BNQ99877 126 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HIST1H2BMQ99879 126 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 HSPB9Q9BQS6 159 aa11.12□□□□□ -0.63
CDK5RAP1-202ENST00000346416 IGHV1-69DA0A0B4J2H0 117 aa11.11□□□□□ -0.63
CDK5RAP1-202ENST00000346416 IGHV1-69P01742 117 aa11.11□□□□□ -0.63
CDK5RAP1-202ENST00000346416 FABP1P07148 127 aa11.11□□□□□ -0.63
CDK5RAP1-202ENST00000346416 RANP62826 216 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP1-202ENST00000346416 ZNF329Q86UD4 541 aa11.11□□□□□ -0.63
CDK5RAP1-202ENST00000346416 BLNKQ8WV28 456 aa11.11□□□□□ -0.63
CDK5RAP1-202ENST00000346416 TRAV40A0A0B4J280 105 aa11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 GGCTO75223 188 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 NBEAP1P0C6P0 100 aa11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 GP9P14770 177 aa11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 FAM3BP58499 235 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 KCNIP4Q6PIL6 250 aa11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 BRD3OSQ6XYD6 125 aa11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 OR10G8Q8NGN5 311 aa11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 SLC25A39Q9BZJ4 359 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 SRD5A3Q9H8P0 318 aa11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 THYN1Q9P016 225 aa11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 MRPL27Q9P0M9 148 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 ANKRD17O75179 2603 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 FBN2P35556 2912 aa11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 POLQO75417 2590 aa11.1□□□□□ -0.63
CDK5RAP1-202ENST00000346416 PPP5D1E7EU14 171 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 GNG7O60262 68 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 COX6B1P14854 86 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 MYCNOSP40205 109 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 MFAP4P55083 255 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 A1L4Q6 167 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 OR2J3O76001 311 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 NDUFB8O95169 186 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 TOMM40O96008 361 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 S100A2P29034 98 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 OR5I1Q13606 314 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 FRZBQ92765 325 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 LINC00479Q96M42 142 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 IMMP2LQ96T52 175 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 TMUB1Q9BVT8 246 aa11.09□□□□□ -0.63
CDK5RAP1-202ENST00000346416 USP9YO00507 2555 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TRAV30A0A087WSZ9 112 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 F8W735 103 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 PHOX2AO14813 284 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 MSMBP08118 114 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TRGC1P0CF51 173 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms