RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ZNF98A6NK75 572 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 BSXQ3C1V8 233 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 SPSB3Q6PJ21 355 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 MCRIP2Q9BUT9 160 aaKnown RBP12.29□□□□□ -0.44
RAB5C-201ENST00000346213 TREM1Q9NP99 234 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 RPRMQ9NS64 109 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
RAB5C-201ENST00000346213 TRBV9A0A0B4J1U6 114 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 H3BUA1 57 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 OVOL1O14753 267 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 AGPAT2O15120 278 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 MPDU1O75352 247 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 BRI3O95415 125 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 HBE1P02100 147 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 IFNA4P05014 189 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 REG1AP05451 166 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 EDN2P20800 178 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 AKR1C1Q04828 323 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 C2orf83Q53S99 150 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 C9orf66Q5T8R8 295 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 MMD2Q8IY49 270 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 CLRN3Q8NCR9 226 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 NARS2Q96I59 477 aaKnown RBP12.29□□□□□ -0.44
RAB5C-201ENST00000346213 FANCD2OSQ96PS1 177 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 SCRT1Q9BWW7 348 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 S4R3C0 116 aa12.29□□□□□ -0.44
RAB5C-201ENST00000346213 TRAV1-1A0A0B4J248 108 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 FNDC10F2Z333 226 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 C17orf112F2Z3M2 114 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 HSPB1P04792 205 aaKnown RBP12.28□□□□□ -0.44
RAB5C-201ENST00000346213 BTN1A1Q13410 526 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 C10orf91Q5T1B1 145 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 ZNF343Q6P1L6 599 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 TTC9CQ8N5M4 171 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 MBD3L1Q8WWY6 194 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 NPCDR1Q9BY65 106 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 TMEM231Q9H6L2 316 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 VSIRQ9H7M9 311 aa12.28□□□□□ -0.44
RAB5C-201ENST00000346213 LSM4Q9Y4Z0 139 aaKnown RBP12.28□□□□□ -0.44
RAB5C-201ENST00000346213 MBP02144 154 aa12.27□□□□□ -0.45
RAB5C-201ENST00000346213 RAB2AP61019 212 aa12.27□□□□□ -0.45
RAB5C-201ENST00000346213 ERHP84090 104 aaKnown RBP12.27□□□□□ -0.45
RAB5C-201ENST00000346213 RHOGP84095 191 aa12.27□□□□□ -0.45
RAB5C-201ENST00000346213 PEA15Q15121 130 aa12.27□□□□□ -0.45
RAB5C-201ENST00000346213 GUK1Q16774 197 aa12.27□□□□□ -0.45
RAB5C-201ENST00000346213 ACSM6Q6P461 480 aa12.27□□□□□ -0.45
RAB5C-201ENST00000346213 ZNF709Q8N972 641 aa12.27□□□□□ -0.45
RAB5C-201ENST00000346213 BMPR1BO00238 502 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 OR2J3O76001 311 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 RNASE2P10153 161 aaKnown RBP12.26□□□□□ -0.45
RAB5C-201ENST00000346213 MAS1LP35410 378 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 RPL27AP46776 148 aaKnown RBP12.26□□□□□ -0.45
RAB5C-201ENST00000346213 DPF1Q92782 380 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 PBDC1Q9BVG4 233 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 NPVFQ9HCQ7 196 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 IGLC7A0M8Q6 106 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 NDUFB8O95169 186 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 IGHV3-23P01764 117 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 APOC3P02656 99 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 S100A6P06703 90 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 KLF5Q13887 457 aaPredicted RBP12.26□□□□□ -0.45
RAB5C-201ENST00000346213 ADAMTSL5Q6ZMM2 481 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 OR10W1Q8NGF6 305 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 SFT2D1Q8WV19 159 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 TMEM68Q96MH6 324 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 SEC11CQ9BY50 192 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 SMDT1Q9H4I9 107 aa12.26□□□□□ -0.45
RAB5C-201ENST00000346213 SAP30O75446 220 aa12.25□□□□□ -0.45
RAB5C-201ENST00000346213 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
RAB5C-201ENST00000346213 ELLP55199 621 aaPredicted RBP12.25□□□□□ -0.45
RAB5C-201ENST00000346213 CCL20P78556 96 aa12.25□□□□□ -0.45
RAB5C-201ENST00000346213 ZNF726P1Q15940 193 aa12.25□□□□□ -0.45
RAB5C-201ENST00000346213 DEFB121Q5J5C9 76 aa12.25□□□□□ -0.45
RAB5C-201ENST00000346213 CCDC140Q96MF4 163 aa12.25□□□□□ -0.45
RAB5C-201ENST00000346213 CARHSP1Q9Y2V2 147 aaKnown RBP12.25□□□□□ -0.45
RAB5C-201ENST00000346213 SMCO3A2RU48 225 aa12.24□□□□□ -0.45
RAB5C-201ENST00000346213 F8W036 122 aa12.24□□□□□ -0.45
RAB5C-201ENST00000346213 CRYGCP07315 174 aa12.24□□□□□ -0.45
RAB5C-201ENST00000346213 SYNJ2BPP57105 145 aa12.24□□□□□ -0.45
RAB5C-201ENST00000346213 FFAR4Q5NUL3 377 aa12.24□□□□□ -0.45
RAB5C-201ENST00000346213 GPR61Q9BZJ8 451 aa12.24□□□□□ -0.45
RAB5C-201ENST00000346213 A0A1B0GV50 99 aa12.23□□□□□ -0.45
RAB5C-201ENST00000346213 NPIPB5A8MRT5 1133 aa12.23□□□□□ -0.45
RAB5C-201ENST00000346213 C9JQL5 133 aa12.23□□□□□ -0.45
RAB5C-201ENST00000346213 PPP5D1E7EU14 171 aa12.23□□□□□ -0.45
RAB5C-201ENST00000346213 OPRK1P41145 380 aa12.23□□□□□ -0.45
RAB5C-201ENST00000346213 MFAP2P55001 183 aa12.23□□□□□ -0.45
RAB5C-201ENST00000346213 WT1-ASQ06250 92 aa12.23□□□□□ -0.45
RAB5C-201ENST00000346213 KLK9Q2XQG4 91 aa12.23□□□□□ -0.45
RAB5C-201ENST00000346213 RPP25LQ8N5L8 163 aaKnown RBP12.23□□□□□ -0.45
RAB5C-201ENST00000346213 EIF5A2Q9GZV4 153 aaKnown RBP12.23□□□□□ -0.45
RAB5C-201ENST00000346213 KLK9Q9UKQ9 250 aa12.23□□□□□ -0.45
RAB5C-201ENST00000346213 RBFOX3A6NFN3 312 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 PCP4L1A6NKN8 68 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 ACTL6BO94805 426 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 SUB1P53999 127 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAB5C-201ENST00000346213 C15orf32Q32M92 178 aa12.22□□□□□ -0.45
RAB5C-201ENST00000346213 ACOT6Q3I5F7 207 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-201ENST00000346213 TEPPQ6URK8 271 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms