RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 NPIPB5A8MRT5 1133 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 C9JAW5 83 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 M0R2P5 195 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 IGKV3-20P01619 116 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 ATP5G2Q06055 141 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 EXOC3-AS1Q8N2X6 119 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 FLVCR1-AS1Q8TAF5 88 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 DDB2Q92466 427 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 COX8AP10176 69 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 H7C1H1 209 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 MLNRO43193 412 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 C9orf153Q5TBE3 101 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 PRSS57Q6UWY2 283 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 C8orf46Q8TAG6 207 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 FGFBP3Q8TAT2 258 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 EEF1AKMT3Q96AZ1 226 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 RNF125Q96EQ8 232 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 PNRC2Q9NPJ4 139 aaKnown RBP9.99□□□□□ -0.81
COL12A1-202ENST00000345356 IQCF6A8MYZ5 107 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 C5orf67F2Z3F1 127 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 WFDC12Q8WWY7 111 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 LIME1Q9H400 295 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 YAE1D1Q9NRH1 226 aa9.99□□□□□ -0.81
COL12A1-202ENST00000345356 TRAV3A0A0B4J244 114 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 F2Z2F3 143 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 DYNLRB2Q8TF09 96 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 ICE1Q9Y2F5 2266 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 LOC285556D6RIA3 1793 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-202ENST00000345356 CELA3BP08861 270 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 SLAQ13239 276 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 C11orf68Q9H3H3 251 aaKnown RBP9.98□□□□□ -0.81
COL12A1-202ENST00000345356 ZNF114Q8NC26 417 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 MTCL1Q9Y4B5 1905 aaKnown RBP9.98□□□□□ -0.81
COL12A1-202ENST00000345356 CELA3AP09093 270 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 PAX9P55771 341 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 ASCL4Q6XD76 172 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 TMEM158Q8WZ71 300 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 SLC25A15Q9Y619 301 aa9.98□□□□□ -0.81
COL12A1-202ENST00000345356 NABP1Q96AH0 204 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 CECR9P0C854 216 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 RNASE4P34096 147 aaKnown RBP9.97□□□□□ -0.81
COL12A1-202ENST00000345356 COA6Q5JTJ3 125 aaKnown RBP9.97□□□□□ -0.81
COL12A1-202ENST00000345356 RAX2Q96IS3 184 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 RCHY1Q96PM5 261 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 MBNL3Q9NUK0 354 aaKnown RBP9.97□□□□□ -0.81
COL12A1-202ENST00000345356 ANAPC10Q9UM13 185 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 PDCD11Q14690 1871 aaKnown RBP9.97□□□□□ -0.81
COL12A1-202ENST00000345356 IGHV3OR16-12A0A075B7B8 117 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 CNTFRP26992 372 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 PVRIGQ6DKI7 326 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 HAPLN4Q86UW8 402 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 PPDPFLQ8WWR9 84 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 PLXNB2O15031 1838 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 IGKV3D-20A0A0C4DH25 116 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 SMKR1H3BMG3 65 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 AMN1Q8IY45 258 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 SS18L2Q9UHA2 77 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 PATJQ8NI35 1801 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 DOCK11Q5JSL3 2073 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 IGHV1-24A0A0C4DH33 117 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 C1orf53Q5VUE5 145 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 Q6ZT83 130 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 TDHQ8IZJ6 230 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 NPFFR1Q9GZQ6 430 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 V9GYV3 84 aa9.97□□□□□ -0.81
COL12A1-202ENST00000345356 EFNA2O43921 213 aa9.96□□□□□ -0.81
COL12A1-202ENST00000345356 GFRA3O60609 400 aa9.96□□□□□ -0.81
COL12A1-202ENST00000345356 ARPC1AQ92747 370 aa9.96□□□□□ -0.81
COL12A1-202ENST00000345356 PATE3B3GLJ2 98 aa9.96□□□□□ -0.82
COL12A1-202ENST00000345356 CD24P25063 80 aa9.96□□□□□ -0.82
COL12A1-202ENST00000345356 FAM90A1Q86YD7 464 aa9.96□□□□□ -0.82
COL12A1-202ENST00000345356 SP7Q8TDD2 431 aaPredicted RBP9.96□□□□□ -0.82
COL12A1-202ENST00000345356 RNF115Q9Y4L5 304 aa9.96□□□□□ -0.82
COL12A1-202ENST00000345356 ZNF329Q86UD4 541 aa9.96□□□□□ -0.82
COL12A1-202ENST00000345356 PMS2P5A8MQ11 134 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 AHRRA9YTQ3 701 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 IGKV1D-33P01593 117 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 IGKV1-33P01594 117 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 ZNF562Q6V9R5 426 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 ZNF784Q8NCA9 323 aaPredicted RBP9.95□□□□□ -0.82
COL12A1-202ENST00000345356 COL4A5P29400 1685 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 TDRG1Q3Y452 100 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 Q6ZS49 121 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 IGKV2-40A0A087WW87 121 aaPredicted RBP9.95□□□□□ -0.82
COL12A1-202ENST00000345356 IGKV2D-40P01614 121 aaPredicted RBP9.95□□□□□ -0.82
COL12A1-202ENST00000345356 LINC00312Q9Y6C7 94 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 TRAV40A0A0B4J280 105 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 LINC00473A8K010 186 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 SAP30O75446 220 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 RPL15P61313 204 aaKnown RBP9.95□□□□□ -0.82
COL12A1-202ENST00000345356 NPC2P61916 151 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 SLC25A39Q9BZJ4 359 aaPredicted RBP9.95□□□□□ -0.82
COL12A1-202ENST00000345356 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 TDRD6O60522 2096 aaKnown RBP9.95□□□□□ -0.82
COL12A1-202ENST00000345356 PARP14Q460N5 1801 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 SBF2Q86WG5 1849 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 H3BMG7 143 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 IFITM1P13164 125 aa9.95□□□□□ -0.82
COL12A1-202ENST00000345356 HIST1H4AP62805 103 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms