RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 PLEKHA3Q9HB20 300 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 SLC45A2Q9UMX9 530 aa10.3□□□□□ -0.76
CLK3-201ENST00000345005 LSM4Q9Y4Z0 139 aaKnown RBP10.3□□□□□ -0.76
CLK3-201ENST00000345005 UTP20O75691 2785 aaKnown RBP10.29□□□□□ -0.76
CLK3-201ENST00000345005 IGHV2-70DA0A0C4DH43 119 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 C20orf202A1L168 122 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 FOXH1O75593 365 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 PAX2Q02962 417 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 TPTE2P1Q5T6R2 138 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 SMIM15Q7Z3B0 74 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 TEX45Q8NA69 505 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 OR1L6Q8NGR2 347 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 OR1L8Q8NGR8 309 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 RNF5Q99942 180 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 OSTCQ9NRP0 149 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 TACC2O95359 2948 aa10.29□□□□□ -0.76
CLK3-201ENST00000345005 IGHV3-72A0A0B4J1Y9 119 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 ODF3BA8MYP8 253 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 PRSS46E5RG02 174 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 PPBPP02775 128 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 ATP5J2P56134 94 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 HCP5Q6MZN7 132 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 CLEC2AQ6UVW9 174 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 VMO1Q7Z5L0 202 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 EAF1Q96JC9 268 aaPredicted RBP10.28□□□□□ -0.76
CLK3-201ENST00000345005 SLC35E1Q96K37 410 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 HSPB9Q9BQS6 159 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 NBPF19A0A087WUL8 3843 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 SCO2A0A1W2PP80 73 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 RRHO14718 337 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 MYOD1P15172 320 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 NPY1RP25929 384 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 TAS2R45P59539 299 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 RASL11AQ6T310 242 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 Q6ZWC4 215 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 MMD2Q8IY49 270 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 KLHDC1Q8N7A1 406 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 C10orf105Q8TEF2 133 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 DERL1Q9BUN8 251 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 SIRPDQ9H106 197 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 NDUFA4L2Q9NRX3 87 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 LRRK2Q5S007 2527 aa10.28□□□□□ -0.76
CLK3-201ENST00000345005 HELTA6NFD8 242 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 SLC25A17O43808 307 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 SERF1AO75920 110 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 HLA-DQA1P01909 254 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 GNG4P50150 75 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 CX3CL1P78423 397 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 KLRD1Q13241 179 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 TIGITQ495A1 244 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 MIC13Q5XKP0 118 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 PQLC2Q6ZP29 291 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 C19orf35Q6ZS72 473 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 ZNF114Q8NC26 417 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 RITA1Q96K30 269 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 ZNF430Q9H8G1 570 aaPredicted RBP10.27□□□□□ -0.77
CLK3-201ENST00000345005 TECRQ9NZ01 308 aaKnown RBP10.27□□□□□ -0.77
CLK3-201ENST00000345005 MED13LQ71F56 2210 aa10.27□□□□□ -0.77
CLK3-201ENST00000345005 TRBV20OR9-2A0A075B6H5 130 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 A0A1W2PPI3 338 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 OOSP1A8MZH6 123 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 INS-IGF2F8WCM5 200 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 TOX4O94842 621 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 TOMM40O96008 361 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 CA2P00918 260 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 GPX1P07203 203 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 ERHP84090 104 aaKnown RBP10.26□□□□□ -0.77
CLK3-201ENST00000345005 PRSS8Q16651 343 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 MINOS1Q5TGZ0 78 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 DNAJC4Q9NNZ3 241 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 MINOS1-NBL1R4GNA1 71 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 PLXNB1O43157 2135 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 PTPN13Q12923 2485 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 SNURFLB1AK76 121 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 VWC2LB2RUY7 222 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 ISLRO14498 428 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 NUPR1O60356 82 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 HOXB4P17483 251 aaPredicted RBP10.26□□□□□ -0.77
CLK3-201ENST00000345005 CBLN1P23435 193 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 DSCR9P59020 149 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 SUMO1P63165 101 aaKnown RBP10.26□□□□□ -0.77
CLK3-201ENST00000345005 OR5I1Q13606 314 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 PSG5Q15238 335 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 GCSAMLQ5JQS6 135 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 LDLRAD2Q5SZI1 272 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 CCDC144NLQ6NUI1 221 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 STPG3Q8N7X2 389 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 CHRDL1Q9BU40 450 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 UQCR10Q9UDW1 63 aa10.26□□□□□ -0.77
CLK3-201ENST00000345005 YTHDF2Q9Y5A9 579 aaKnown RBP10.26□□□□□ -0.77
CLK3-201ENST00000345005 A1L4Q6 167 aa10.25□□□□□ -0.77
CLK3-201ENST00000345005 TIMM23O14925 209 aa10.25□□□□□ -0.77
CLK3-201ENST00000345005 CRYGBP07316 175 aa10.25□□□□□ -0.77
CLK3-201ENST00000345005 IER3P46695 156 aa10.25□□□□□ -0.77
CLK3-201ENST00000345005 C2orf83Q53S99 150 aa10.25□□□□□ -0.77
CLK3-201ENST00000345005 FAM162BQ5T6X4 162 aa10.25□□□□□ -0.77
CLK3-201ENST00000345005 TP53TG3Q9ULZ0 132 aa10.25□□□□□ -0.77
CLK3-201ENST00000345005 HILPDAQ9Y5L2 63 aa10.25□□□□□ -0.77
CLK3-201ENST00000345005 V9GYV3 84 aa10.25□□□□□ -0.77
CLK3-201ENST00000345005 SPG11Q96JI7 2443 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms