RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SLC25A39Q9BZJ4 359 aaPredicted RBP14.9□□□□□ -0.02
SMC4-201ENST00000344722 ZNF71Q9NQZ8 489 aaPredicted RBP14.9□□□□□ -0.02
SMC4-201ENST00000344722 JMJD8Q96S16 334 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 LIME1Q9H400 295 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 MOB4Q9Y3A3 225 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 C1orf147Q96MC9 270 aaPredicted RBP14.9□□□□□ -0.02
SMC4-201ENST00000344722 RNASE1P07998 156 aaKnown RBP14.89□□□□□ -0.03
SMC4-201ENST00000344722 SSBP2P81877 361 aaPredicted RBP14.89□□□□□ -0.03
SMC4-201ENST00000344722 TNS1Q9HBL0 1735 aaKnown RBP14.89□□□□□ -0.03
SMC4-201ENST00000344722 DPM3Q9P2X0 92 aa14.89□□□□□ -0.03
SMC4-201ENST00000344722 FOXL2NBQ6ZUU3 175 aa14.89□□□□□ -0.03
SMC4-201ENST00000344722 ARPC1AQ92747 370 aa14.89□□□□□ -0.03
SMC4-201ENST00000344722 TNFRSF18Q9Y5U5 241 aa14.89□□□□□ -0.03
SMC4-201ENST00000344722 ZSWIM8A7E2V4 1837 aa14.89□□□□□ -0.03
SMC4-201ENST00000344722 IGHV3OR16-13A0A075B7E8 117 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 IGHV3-74A0A0B4J1X5 117 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 K7EP13 123 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 LYZL1Q6UWQ5 148 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 STPG4Q8N801 248 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 COA6Q5JTJ3 125 aaKnown RBP14.88□□□□□ -0.03
SMC4-201ENST00000344722 FAM71F2Q6NXP2 309 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 ZNF329Q86UD4 541 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 TRAV2A0A0B4J234 112 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 TOMM40O96008 361 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 Q6P435 159 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 LTBP1Q14766 1721 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 TFF1P04155 84 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 PRR31Q5SQ13 230 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 K7EP34 96 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 TMEM249Q2WGJ8 235 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 DEFB123Q8N688 67 aa14.88□□□□□ -0.03
SMC4-201ENST00000344722 TRAV3A0A0B4J244 114 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 SNRPD3P62318 126 aaKnown RBP14.87□□□□□ -0.03
SMC4-201ENST00000344722 CRIPAKQ8N1N5 446 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 TRGV9Q99603 122 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 IGHV3-66A0A0C4DH42 116 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 EFEMP2O95967 443 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 PRTN3P24158 256 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.87□□□□□ -0.03
SMC4-201ENST00000344722 LINC00473A8K010 186 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 IGLL1P15814 213 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 ZNF138P52744 262 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 PSPNO60542 156 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 IGKV1D-33P01593 117 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 IGKV1-33P01594 117 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 RHOGP84095 191 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 OR13C6PQ8NH95 151 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 HEATR5BQ9P2D3 2071 aa14.87□□□□□ -0.03
SMC4-201ENST00000344722 NCR2O95944 276 aa14.86□□□□□ -0.03
SMC4-201ENST00000344722 PPP1R27Q86WC6 154 aa14.86□□□□□ -0.03
SMC4-201ENST00000344722 XIRP1Q702N8 1843 aaKnown RBP14.86□□□□□ -0.03
SMC4-201ENST00000344722 IFI27P40305 119 aaPredicted RBP14.86□□□□□ -0.03
SMC4-201ENST00000344722 RNF182Q8N6D2 247 aa14.86□□□□□ -0.03
SMC4-201ENST00000344722 KNTC1P50748 2209 aa14.86□□□□□ -0.03
SMC4-201ENST00000344722 PLAURQ03405 335 aa14.86□□□□□ -0.03
SMC4-201ENST00000344722 RAX2Q96IS3 184 aa14.85□□□□□ -0.03
SMC4-201ENST00000344722 ATXN8Q156A1 80 aa14.85□□□□□ -0.03
SMC4-201ENST00000344722 MCRIP2Q9BUT9 160 aaKnown RBP14.85□□□□□ -0.03
SMC4-201ENST00000344722 V9GYV3 84 aa14.85□□□□□ -0.03
SMC4-201ENST00000344722 B9A039 149 aa14.85□□□□□ -0.03
SMC4-201ENST00000344722 NKX2-8O15522 239 aa14.85□□□□□ -0.03
SMC4-201ENST00000344722 CD300EQ496F6 205 aaPredicted RBP14.85□□□□□ -0.03
SMC4-201ENST00000344722 MYLKQ15746 1914 aa14.85□□□□□ -0.03
SMC4-201ENST00000344722 CCL3L1P16619 93 aa14.85□□□□□ -0.03
SMC4-201ENST00000344722 PGPEP1Q9NXJ5 209 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 RNASE4P34096 147 aaKnown RBP14.84□□□□□ -0.03
SMC4-201ENST00000344722 TMPRSS3P57727 454 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 TMEM155Q4W5P6 130 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 ZC2HC1BQ5TFG8 222 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 GGNQ86UU5 652 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 EXOC3-AS1Q8N2X6 119 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 ZNF492Q9P255 531 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 CT83Q5H943 113 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 TMEM238C9JI98 176 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 NBR2O15453 112 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 COX8AP10176 69 aa14.84□□□□□ -0.03
SMC4-201ENST00000344722 TDRD6O60522 2096 aaKnown RBP14.83□□□□□ -0.03
SMC4-201ENST00000344722 IGHV3-49A0A0A0MS15 119 aa14.83□□□□□ -0.03
SMC4-201ENST00000344722 F8W1H4 67 aa14.83□□□□□ -0.03
SMC4-201ENST00000344722 TSSC4Q9Y5U2 329 aaPredicted RBP14.83□□□□□ -0.03
SMC4-201ENST00000344722 TRAV21A0A0B4J279 112 aa14.83□□□□□ -0.04
SMC4-201ENST00000344722 IGKV1-6A0A0C4DH72 117 aa14.83□□□□□ -0.04
SMC4-201ENST00000344722 NPIPB5A8MRT5 1133 aa14.83□□□□□ -0.04
SMC4-201ENST00000344722 PPIFP30405 207 aaKnown RBP14.83□□□□□ -0.04
SMC4-201ENST00000344722 C20orf204Q6ZNR8 217 aa14.83□□□□□ -0.04
SMC4-201ENST00000344722 FXYD7P58549 80 aa14.83□□□□□ -0.04
SMC4-201ENST00000344722 RPUSD1Q9UJJ7 312 aaKnown RBP14.83□□□□□ -0.04
SMC4-201ENST00000344722 SMIM27A0A1W2PRY6 76 aa14.83□□□□□ -0.04
SMC4-201ENST00000344722 TRAV8-1A0A0A6YYK1 113 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 FOXC1Q12948 553 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 CYYR1Q96J86 154 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 ATP6V0BQ99437 205 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 SCRT1Q9BWW7 348 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 PLXNA3P51805 1871 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 PMS2P5A8MQ11 134 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 SRRM5B3KS81 715 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 RPL15P61313 204 aaKnown RBP14.82□□□□□ -0.04
SMC4-201ENST00000344722 BVES-AS1Q5T3Y7 98 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 E9PLN8 166 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 PDLIM4P50479 330 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms