RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 RAXQ9Y2V3 346 aa17.07■□□□□ 0.32
CCDC38-201ENST00000344280 F11RQ9Y624 299 aaKnown RBP17.07■□□□□ 0.32
CCDC38-201ENST00000344280 Q6ZWC4 215 aa17.06■□□□□ 0.32
CCDC38-201ENST00000344280 PERPQ96FX8 193 aa17.06■□□□□ 0.32
CCDC38-201ENST00000344280 LY6LH3BQJ8 138 aa17.05■□□□□ 0.32
CCDC38-201ENST00000344280 BAGE3Q86Y29 109 aa17.05■□□□□ 0.32
CCDC38-201ENST00000344280 SRSF12Q8WXF0 261 aaKnown RBP17.05■□□□□ 0.32
CCDC38-201ENST00000344280 GNB4Q9HAV0 340 aa17.05■□□□□ 0.32
CCDC38-201ENST00000344280 TRBV9A0A0B4J1U6 114 aa17.05■□□□□ 0.32
CCDC38-201ENST00000344280 ADORA2A-AS1P86434 159 aa17.05■□□□□ 0.32
CCDC38-201ENST00000344280 PRR27Q6MZM9 219 aa17.05■□□□□ 0.32
CCDC38-201ENST00000344280 MSRB2Q9Y3D2 182 aa17.05■□□□□ 0.32
CCDC38-201ENST00000344280 RPH3ALQ9UNE2 315 aa17.04■□□□□ 0.32
CCDC38-201ENST00000344280 SPTBN4Q9H254 2564 aa17.04■□□□□ 0.32
CCDC38-201ENST00000344280 PGPA6NDG6 321 aa17.04■□□□□ 0.32
CCDC38-201ENST00000344280 TIMM23O14925 209 aa17.04■□□□□ 0.32
CCDC38-201ENST00000344280 OR8B3Q8NGG8 313 aa17.04■□□□□ 0.32
CCDC38-201ENST00000344280 C8orf46Q8TAG6 207 aa17.04■□□□□ 0.32
CCDC38-201ENST00000344280 C22orf15Q8WYQ4 148 aa17.04■□□□□ 0.32
CCDC38-201ENST00000344280 OR8B2Q96RD0 313 aa17.04■□□□□ 0.32
CCDC38-201ENST00000344280 EPDR1Q9UM22 224 aa17.04■□□□□ 0.32
CCDC38-201ENST00000344280 HYPMO75409 117 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 SLC25A5P05141 298 aaKnown RBP17.03■□□□□ 0.32
CCDC38-201ENST00000344280 NBEAP1P0C6P0 100 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 ESDP10768 282 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 CD24P25063 80 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 ARF6P62330 175 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 FBLN7Q53RD9 439 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 NUDT10Q8NFP7 164 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 NUDT11Q96G61 164 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 NAGKQ9UJ70 344 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 POLR3KQ9Y2Y1 108 aaPredicted RBP17.03■□□□□ 0.32
CCDC38-201ENST00000344280 SPTBN1Q01082 2364 aaKnown RBP17.03■□□□□ 0.32
CCDC38-201ENST00000344280 GP9P14770 177 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 Q0VG73 95 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 PLGLAQ15195 96 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 MBD6Q96DN6 1003 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 C7orf69Q9H7B7 122 aa17.03■□□□□ 0.32
CCDC38-201ENST00000344280 CORTO00230 105 aa17.02■□□□□ 0.32
CCDC38-201ENST00000344280 RBP4P02753 201 aa17.02■□□□□ 0.32
CCDC38-201ENST00000344280 NOL4LQ96MY1 436 aaPredicted RBP17.02■□□□□ 0.32
CCDC38-201ENST00000344280 HILPDAQ9Y5L2 63 aa17.02■□□□□ 0.32
CCDC38-201ENST00000344280 AMY1AP04745 511 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 LIPFP07098 398 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 IGLC1P0CG04 106 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 PSG1P11464 419 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 TPPP2P59282 170 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 WDR73Q6P4I2 378 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 LY6G5BQ8NDX9 201 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 RCHY1Q96PM5 261 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 HSPB9Q9BQS6 159 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 MED13LQ71F56 2210 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 IZUMO1RA6ND01 250 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 BMPR1BO00238 502 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 KLRD1Q13241 179 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 TMEM183BQ1AE95 376 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 STXBP6Q8NFX7 210 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 RNF114Q9Y508 228 aa17.01■□□□□ 0.31
CCDC38-201ENST00000344280 I3L2K1 104 aa17■□□□□ 0.31
CCDC38-201ENST00000344280 MT-ND6P03923 174 aa17■□□□□ 0.31
CCDC38-201ENST00000344280 CDKN1AP38936 164 aa17■□□□□ 0.31
CCDC38-201ENST00000344280 MMDQ15546 238 aa17■□□□□ 0.31
CCDC38-201ENST00000344280 FAM231DQ6ZW35 169 aa17■□□□□ 0.31
CCDC38-201ENST00000344280 WNT10AQ9GZT5 417 aa17■□□□□ 0.31
CCDC38-201ENST00000344280 LYZP61626 148 aa17■□□□□ 0.31
CCDC38-201ENST00000344280 SLAQ13239 276 aa17■□□□□ 0.31
CCDC38-201ENST00000344280 FAM103A1Q9BTL3 118 aaKnown RBP17■□□□□ 0.31
CCDC38-201ENST00000344280 A0A1W2PRD5 423 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 A0A1W2PRF3 423 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 A0A1W2PRM7 423 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 SRIP30626 198 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 UBE2G1P62253 170 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 PAFAH1B2P68402 229 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 TDRG1Q3Y452 100 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 TPTE2P1Q5T6R2 138 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 LINC00322Q6ZN03 302 aaPredicted RBP16.99■□□□□ 0.31
CCDC38-201ENST00000344280 NUP35Q8NFH5 326 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 PAX2Q02962 417 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 GDF5OSQ5U4N7 250 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 TBX15Q96SF7 602 aa16.99■□□□□ 0.31
CCDC38-201ENST00000344280 ZNF705FA8MVS1 300 aaPredicted RBP16.98■□□□□ 0.31
CCDC38-201ENST00000344280 CNIH1O95406 144 aa16.98■□□□□ 0.31
CCDC38-201ENST00000344280 ZNF705DP0CH99 300 aaPredicted RBP16.98■□□□□ 0.31
CCDC38-201ENST00000344280 ZNF705BP0CI00 300 aaPredicted RBP16.98■□□□□ 0.31
CCDC38-201ENST00000344280 PLP1P60201 277 aa16.98■□□□□ 0.31
CCDC38-201ENST00000344280 ZNF124Q15973 351 aa16.98■□□□□ 0.31
CCDC38-201ENST00000344280 PRR31Q5SQ13 230 aa16.98■□□□□ 0.31
CCDC38-201ENST00000344280 NDUFAF3Q9BU61 184 aa16.98■□□□□ 0.31
CCDC38-201ENST00000344280 SAMD10Q9BYL1 202 aa16.98■□□□□ 0.31
CCDC38-201ENST00000344280 VWC2LB2RUY7 222 aa16.98■□□□□ 0.31
CCDC38-201ENST00000344280 RPL19P84098 196 aaKnown RBP16.98■□□□□ 0.31
CCDC38-201ENST00000344280 GRAMD2BQ96HH9 432 aa16.98■□□□□ 0.31
CCDC38-201ENST00000344280 Q9H3A6 140 aa16.98■□□□□ 0.31
CCDC38-201ENST00000344280 KLF12Q9Y4X4 402 aa16.98■□□□□ 0.31
CCDC38-201ENST00000344280 CHD8Q9HCK8 2581 aa16.97■□□□□ 0.31
CCDC38-201ENST00000344280 IGKV1-17P01599 117 aa16.97■□□□□ 0.31
CCDC38-201ENST00000344280 HLA-DQA1P01909 254 aa16.97■□□□□ 0.31
CCDC38-201ENST00000344280 HTR1DP28221 377 aa16.97■□□□□ 0.31
CCDC38-201ENST00000344280 RAB1BQ9H0U4 201 aa16.97■□□□□ 0.31
CCDC38-201ENST00000344280 HIGD1AQ9Y241 93 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms