RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 KIR2DL5BA0A0G2JN68 375 aa15.45■□□□□ 0.06
COL9A3-201ENST00000343916 KIR2DL5BA0A0G2JPC4 375 aa15.45■□□□□ 0.06
COL9A3-201ENST00000343916 TEX22C9J3V5 150 aa15.45■□□□□ 0.06
COL9A3-201ENST00000343916 ETFRF1Q6IPR1 90 aa15.45■□□□□ 0.06
COL9A3-201ENST00000343916 KIR2DL5AQ8N109 375 aa15.45■□□□□ 0.06
COL9A3-201ENST00000343916 TP53TG3Q9ULZ0 132 aa15.45■□□□□ 0.06
COL9A3-201ENST00000343916 MED13LQ71F56 2210 aa15.45■□□□□ 0.06
COL9A3-201ENST00000343916 RANP62826 216 aaKnown RBP15.45■□□□□ 0.06
COL9A3-201ENST00000343916 PLGLAQ15195 96 aa15.45■□□□□ 0.06
COL9A3-201ENST00000343916 BLNKQ8WV28 456 aa15.45■□□□□ 0.06
COL9A3-201ENST00000343916 MRPL18Q9H0U6 180 aaKnown RBP15.45■□□□□ 0.06
COL9A3-201ENST00000343916 M0R143 59 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 CA1P00915 261 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-201ENST00000343916 CD24P25063 80 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 IBA57Q5T440 356 aaKnown RBP15.44■□□□□ 0.06
COL9A3-201ENST00000343916 TOMM20LQ6UXN7 152 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 ZNF329Q86UD4 541 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 SRSF12Q8WXF0 261 aaKnown RBP15.44■□□□□ 0.06
COL9A3-201ENST00000343916 HILPDAQ9Y5L2 63 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 TIMM23O14925 209 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 LIPFP07098 398 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 GNG5P63218 68 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 LEMD1Q68G75 181 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 PVRIGQ6DKI7 326 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 TMEM116Q8NCL8 245 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 C8orf46Q8TAG6 207 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 SERTAD4Q9NUC0 356 aa15.44■□□□□ 0.06
COL9A3-201ENST00000343916 SNURFLB1AK76 121 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 LY6LH3BQJ8 138 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 LINC00310P59036 64 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 TDRG1Q3Y452 100 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 Q6ZWC4 215 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 SGK494Q96LW2 274 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 RAB1BQ9H0U4 201 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 CDC42EP3Q9UKI2 254 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 A0A1W2PRD5 423 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 A0A1W2PRF3 423 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 A0A1W2PRM7 423 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 KLRD1Q13241 179 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 ZNF705AQ6ZN79 300 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-201ENST00000343916 OSTCQ9NRP0 149 aa15.43■□□□□ 0.06
COL9A3-201ENST00000343916 F11RQ9Y624 299 aaKnown RBP15.43■□□□□ 0.06
COL9A3-201ENST00000343916 TRAV9-1A0A075B6T8 112 aa15.42■□□□□ 0.06
COL9A3-201ENST00000343916 H3BTX0 84 aa15.42■□□□□ 0.06
COL9A3-201ENST00000343916 ISLRO14498 428 aa15.42■□□□□ 0.06
COL9A3-201ENST00000343916 RBP4P02753 201 aa15.42■□□□□ 0.06
COL9A3-201ENST00000343916 C22orf15Q8WYQ4 148 aa15.42■□□□□ 0.06
COL9A3-201ENST00000343916 TRGV9Q99603 122 aa15.42■□□□□ 0.06
COL9A3-201ENST00000343916 F2Z2F3 143 aa15.42■□□□□ 0.06
COL9A3-201ENST00000343916 MMDQ15546 238 aa15.42■□□□□ 0.06
COL9A3-201ENST00000343916 FAM168AQ92567 244 aa15.42■□□□□ 0.06
COL9A3-201ENST00000343916 SSBP3Q9BWW4 388 aaPredicted RBP15.42■□□□□ 0.06
COL9A3-201ENST00000343916 WNK2Q9Y3S1 2297 aa15.42■□□□□ 0.06
COL9A3-201ENST00000343916 PEX7O00628 323 aa15.41■□□□□ 0.06
COL9A3-201ENST00000343916 SERF1AO75920 110 aa15.41■□□□□ 0.06
COL9A3-201ENST00000343916 RAB4AP20338 218 aa15.41■□□□□ 0.06
COL9A3-201ENST00000343916 LY6G5BQ8NDX9 201 aa15.41■□□□□ 0.06
COL9A3-201ENST00000343916 PERPQ96FX8 193 aa15.41■□□□□ 0.06
COL9A3-201ENST00000343916 CDKN1AP38936 164 aa15.41■□□□□ 0.06
COL9A3-201ENST00000343916 FBLN7Q53RD9 439 aa15.41■□□□□ 0.06
COL9A3-201ENST00000343916 CYB5R2Q6BCY4 276 aa15.41■□□□□ 0.06
COL9A3-201ENST00000343916 RPH3ALQ9UNE2 315 aa15.41■□□□□ 0.06
COL9A3-201ENST00000343916 HIVEP3Q5T1R4 2406 aa15.41■□□□□ 0.06
COL9A3-201ENST00000343916 CX3CL1P78423 397 aa15.4■□□□□ 0.06
COL9A3-201ENST00000343916 FAM103A1Q9BTL3 118 aaKnown RBP15.4■□□□□ 0.06
COL9A3-201ENST00000343916 CNIH1O95406 144 aa15.4■□□□□ 0.06
COL9A3-201ENST00000343916 CRISP2P16562 243 aa15.4■□□□□ 0.06
COL9A3-201ENST00000343916 TPTE2P1Q5T6R2 138 aa15.4■□□□□ 0.06
COL9A3-201ENST00000343916 BAGE2Q86Y30 109 aa15.4■□□□□ 0.06
COL9A3-201ENST00000343916 HSPB9Q9BQS6 159 aa15.4■□□□□ 0.06
COL9A3-201ENST00000343916 HTR1DP28221 377 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 TPPP2P59282 170 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 PRR27Q6MZM9 219 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 MRPL54Q6P161 138 aaKnown RBP15.39■□□□□ 0.05
COL9A3-201ENST00000343916 TIMD4Q96H15 378 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 WNT10AQ9GZT5 417 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 AKAP6Q13023 2319 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 CORTO00230 105 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 HYPMO75409 117 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 ZNF25P17030 456 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-201ENST00000343916 MYCNOSP40205 109 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 NAT8BQ9UHF3 227 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 PAM16Q9Y3D7 125 aa15.39■□□□□ 0.05
COL9A3-201ENST00000343916 PGPA6NDG6 321 aa15.38■□□□□ 0.05
COL9A3-201ENST00000343916 A6NNC1 897 aa15.38■□□□□ 0.05
COL9A3-201ENST00000343916 SLC25A5P05141 298 aaKnown RBP15.38■□□□□ 0.05
COL9A3-201ENST00000343916 NBEAP1P0C6P0 100 aa15.38■□□□□ 0.05
COL9A3-201ENST00000343916 PSG1P11464 419 aa15.38■□□□□ 0.05
COL9A3-201ENST00000343916 LYZP61626 148 aa15.38■□□□□ 0.05
COL9A3-201ENST00000343916 KIAA1644Q3SXP7 199 aa15.38■□□□□ 0.05
COL9A3-201ENST00000343916 C11orf71Q6IPW1 123 aa15.38■□□□□ 0.05
COL9A3-201ENST00000343916 BAGE3Q86Y29 109 aa15.38■□□□□ 0.05
COL9A3-201ENST00000343916 VN1R17PQ8TDU5 208 aa15.38■□□□□ 0.05
COL9A3-201ENST00000343916 DPM3Q9P2X0 92 aa15.38■□□□□ 0.05
COL9A3-201ENST00000343916 A0A1W2PPR1 153 aa15.37■□□□□ 0.05
COL9A3-201ENST00000343916 IGLC1P0CG04 106 aa15.37■□□□□ 0.05
COL9A3-201ENST00000343916 GNB1LQ9BYB4 327 aa15.37■□□□□ 0.05
COL9A3-201ENST00000343916 SMIM27A0A1W2PRY6 76 aa15.37■□□□□ 0.05
COL9A3-201ENST00000343916 I3L2K1 104 aa15.37■□□□□ 0.05
COL9A3-201ENST00000343916 GP9P14770 177 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms