RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SRSF12Q8WXF0 261 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 PERPQ96FX8 193 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 TP53TG3Q9ULZ0 132 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 TRAV9-1A0A075B6T8 112 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 KLRD1Q13241 179 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 BAGE2Q86Y30 109 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 ZNF664Q8N3J9 261 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 BEND2Q8NDZ0 799 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 CDC42EP3Q9UKI2 254 aa11.89□□□□□ -0.51
VIPAS39-202ENST00000343765 SERF1AO75920 110 aa11.88□□□□□ -0.51
VIPAS39-202ENST00000343765 CNIH1O95406 144 aa11.88□□□□□ -0.51
VIPAS39-202ENST00000343765 SLC25A5P05141 298 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-202ENST00000343765 CRYGCP07315 174 aa11.88□□□□□ -0.51
VIPAS39-202ENST00000343765 BAGE3Q86Y29 109 aa11.88□□□□□ -0.51
VIPAS39-202ENST00000343765 CX3CL1P78423 397 aa11.88□□□□□ -0.51
VIPAS39-202ENST00000343765 MMDQ15546 238 aa11.88□□□□□ -0.51
VIPAS39-202ENST00000343765 MS4A10Q96PG2 267 aa11.88□□□□□ -0.51
VIPAS39-202ENST00000343765 F11RQ9Y624 299 aaKnown RBP11.88□□□□□ -0.51
VIPAS39-202ENST00000343765 HYPMO75409 117 aa11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 LIPFP07098 398 aa11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 LYZP61626 148 aa11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 FBXL19-AS1Q494R0 122 aa11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 C14orf144Q96I85 54 aa11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 TRGV9Q99603 122 aa11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 PGPA6NDG6 321 aa11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 LINC00310P59036 64 aa11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 KLRB1Q12918 225 aa11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 TMEM116Q8NCL8 245 aa11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 FAM103A1Q9BTL3 118 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-202ENST00000343765 TOX4O94842 621 aa11.86□□□□□ -0.51
VIPAS39-202ENST00000343765 RBP4P02753 201 aa11.86□□□□□ -0.51
VIPAS39-202ENST00000343765 TAS2R60P59551 318 aa11.86□□□□□ -0.51
VIPAS39-202ENST00000343765 RAB1BQ9H0U4 201 aa11.86□□□□□ -0.51
VIPAS39-202ENST00000343765 PRB4P10163 310 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-202ENST00000343765 UBE2G1P62253 170 aa11.86□□□□□ -0.51
VIPAS39-202ENST00000343765 GNB1LQ9BYB4 327 aa11.86□□□□□ -0.51
VIPAS39-202ENST00000343765 UTP20O75691 2785 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-202ENST00000343765 NBEAP1P0C6P0 100 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 LY6LH3BQJ8 138 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 PSG1P11464 419 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 HTR1DP28221 377 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 SSX2Q16385 188 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 IQCJQ1A5X6 159 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 PRR31Q5SQ13 230 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 TPTE2P1Q5T6R2 138 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 TMEM136Q6ZRR5 245 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 TIMD4Q96H15 378 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 WNT10AQ9GZT5 417 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 S4R3C0 116 aa11.85□□□□□ -0.51
VIPAS39-202ENST00000343765 SMIM27A0A1W2PRY6 76 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 HES1Q14469 280 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 FBLN7Q53RD9 439 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 PVRIGQ6DKI7 326 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 GNB4Q9HAV0 340 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 EPDR1Q9UM22 224 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 CORTO00230 105 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 GATCO43716 136 aaKnown RBP11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 CRYBG3Q68DQ2 2970 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 C8orf46Q8TAG6 207 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 SAMD10Q9BYL1 202 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 CSMD2Q7Z408 3487 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 ZNF705FA8MVS1 300 aaPredicted RBP11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 AMY1AP04745 511 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 ZNF705DP0CH99 300 aaPredicted RBP11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 ZNF705BP0CI00 300 aaPredicted RBP11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 UCNP55089 124 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 TPPP2P59282 170 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 RPL19P84098 196 aaKnown RBP11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 NUDT10Q8NFP7 164 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 STXBP6Q8NFX7 210 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 NUDT11Q96G61 164 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 HIGD1AQ9Y241 93 aa11.84□□□□□ -0.51
VIPAS39-202ENST00000343765 TRBV9A0A0B4J1U6 114 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 IGLC1P0CG04 106 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 GP9P14770 177 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 KLF17Q5JT82 389 aaPredicted RBP11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 WDR73Q6P4I2 378 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 Q6ZWC4 215 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 RASL11BQ9BPW5 248 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 HSPB9Q9BQS6 159 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 CBLN4Q9NTU7 201 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 MYCNOSP40205 109 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 LY6G5BQ8NDX9 201 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 DPM3Q9P2X0 92 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
VIPAS39-202ENST00000343765 LOC105371242A0A075B767 164 aa11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 I3L2K1 104 aa11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 SRIP30626 198 aa11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 ZNF600Q6ZNG1 722 aa11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 Q9H3A6 140 aa11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 SPG11Q96JI7 2443 aa11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 CFAP46Q8IYW2 2715 aa11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 IZUMO1RA6ND01 250 aa11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 TMEM183BQ1AE95 376 aa11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 REC114Q7Z4M0 266 aa11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 ZNF331Q9NQX6 463 aaPredicted RBP11.82□□□□□ -0.52
VIPAS39-202ENST00000343765 A8MWP6 167 aa11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 NBR2O15453 112 aa11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 MT-ND6P03923 174 aa11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms