RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 KIR3DS1Q14943 382 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 PET117Q6UWS5 81 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 OR10AG1Q8NH19 301 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 PCSK5Q92824 1860 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 FXYD5Q96DB9 178 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 G3V4G9 280 aa12.01□□□□□ -0.49
CLCN1-201ENST00000343257 TMEM186Q96B77 213 aa12.01□□□□□ -0.49
CLCN1-201ENST00000343257 GTSF1LQ9H1H1 148 aa12.01□□□□□ -0.49
CLCN1-201ENST00000343257 ZNF257Q9Y2Q1 563 aa12.01□□□□□ -0.49
CLCN1-201ENST00000343257 MGST3O14880 152 aa12.01□□□□□ -0.49
CLCN1-201ENST00000343257 KIR2DS2P43631 304 aa12.01□□□□□ -0.49
CLCN1-201ENST00000343257 PEAR1Q5VY43 1037 aaPredicted RBP12.01□□□□□ -0.49
CLCN1-201ENST00000343257 RUSC1-AS1Q66K80 236 aa12.01□□□□□ -0.49
CLCN1-201ENST00000343257 C6orf15Q6UXA7 325 aaPredicted RBP12.01□□□□□ -0.49
CLCN1-201ENST00000343257 PRSS3P2Q8NHM4 247 aa12.01□□□□□ -0.49
CLCN1-201ENST00000343257 C7orf69Q9H7B7 122 aa12.01□□□□□ -0.49
CLCN1-201ENST00000343257 HSPB8Q9UJY1 196 aa12.01□□□□□ -0.49
CLCN1-201ENST00000343257 A0A0G2JLM5 398 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 K7EMI3 77 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 COL8A1P27658 744 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 LOXL1Q08397 574 aaPredicted RBP12□□□□□ -0.49
CLCN1-201ENST00000343257 OR2K2Q8NGT1 345 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12□□□□□ -0.49
CLCN1-201ENST00000343257 hADV38S2A0JD32 116 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 SPRY3O43610 288 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 HOXC12P31275 282 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 PLP1P60201 277 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 ATP5L2Q7Z4Y8 100 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 ITLN1Q8WWA0 313 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 GPR82Q96P67 336 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 SPRR3Q9UBC9 169 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 CIDEAO60543 219 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 NBEAP1P0C6P0 100 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 NMUP48645 174 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 LPAL2Q16609 132 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 C17orf58Q2M2W7 97 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 RNFT1Q5M7Z0 435 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 FAM162BQ5T6X4 162 aa12□□□□□ -0.49
CLCN1-201ENST00000343257 INTS1Q8N201 2190 aaKnown RBP11.99□□□□□ -0.49
CLCN1-201ENST00000343257 SERTM2A0A1B0GWG4 89 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 PSMB11A5LHX3 300 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 C9orf118A6NHY6 69 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 K7ESF4 209 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 PRNTQ86SH4 94 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 MRPL32Q9BYC8 188 aaKnown RBP11.99□□□□□ -0.49
CLCN1-201ENST00000343257 SPCS1Q9Y6A9 102 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 MUC3AQ02505 3323 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 SMAGPQ0VAQ4 97 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 UFSP1Q6NVU6 142 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 FA2HQ7L5A8 372 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 GCSAMQ8N6F7 178 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 MS4A6AQ9H2W1 248 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 AP5S1Q9NUS5 200 aa11.99□□□□□ -0.49
CLCN1-201ENST00000343257 FNDC10F2Z333 226 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 CECR9P0C854 216 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 CT45A6P0DMU7 189 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 CT45A5P0DMU8 189 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 CT45A7P0DMV0 189 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 HCP5Q6MZN7 132 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 RBPMS2Q6ZRY4 209 aaKnown RBP11.98□□□□□ -0.49
CLCN1-201ENST00000343257 NEU4Q8WWR8 484 aaPredicted RBP11.98□□□□□ -0.49
CLCN1-201ENST00000343257 C2orf83Q53S99 150 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 SAMD13Q5VXD3 122 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 PPP1R35Q8TAP8 253 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 HARBI1Q96MB7 349 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 ARMS2P0C7Q2 107 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 SP9P0CG40 484 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 ERHP84090 104 aaKnown RBP11.98□□□□□ -0.49
CLCN1-201ENST00000343257 LINC01545Q5VT33 79 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 C19orf24Q9BVV8 132 aa11.98□□□□□ -0.49
CLCN1-201ENST00000343257 TMSB15BA0A087X1C1 80 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 A0A1W2PRD5 423 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 A0A1W2PRF3 423 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 A0A1W2PRM7 423 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 K7EP34 96 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 F2RL2O00254 374 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 ATP1A1-AS1Q5TC04 95 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 ZNF576Q9H609 170 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 TMEM265A0A087WTH1 108 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 DLL1O00548 723 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 IFI27P40305 119 aaPredicted RBP11.97□□□□□ -0.49
CLCN1-201ENST00000343257 CACNG7P62955 275 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 TMEM108Q6UXF1 575 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 PCP2Q8IVA1 136 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 SRSF12Q8WXF0 261 aaKnown RBP11.97□□□□□ -0.49
CLCN1-201ENST00000343257 ADTRPQ96IZ2 230 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 ZNF747Q9BV97 191 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 TTTY13Q9BZ97 58 aa11.97□□□□□ -0.49
CLCN1-201ENST00000343257 A6NDN8 102 aa11.96□□□□□ -0.49
CLCN1-201ENST00000343257 NTN3O00634 580 aaPredicted RBP11.96□□□□□ -0.49
CLCN1-201ENST00000343257 CFHR2P36980 270 aa11.96□□□□□ -0.49
CLCN1-201ENST00000343257 SEC11AP67812 179 aa11.96□□□□□ -0.49
CLCN1-201ENST00000343257 MSMPQ1L6U9 139 aa11.96□□□□□ -0.49
CLCN1-201ENST00000343257 VWA1Q6PCB0 445 aa11.96□□□□□ -0.49
CLCN1-201ENST00000343257 EXOC3-AS1Q8N2X6 119 aa11.96□□□□□ -0.49
CLCN1-201ENST00000343257 MAFAQ8NHW3 353 aaPredicted RBP11.96□□□□□ -0.49
CLCN1-201ENST00000343257 C1RLQ9NZP8 487 aa11.96□□□□□ -0.49
CLCN1-201ENST00000343257 TRGV5A0A0B4J1U4 118 aa11.96□□□□□ -0.5
CLCN1-201ENST00000343257 LGALS7P47929 136 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms