RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ARFGEF3Q5TH69 2177 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 CCDC168Q8NDH2 2452 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 SONP18583 2426 aaKnown RBP5.88□□□□□ -1.47
VCAN-202ENST00000342785 H0YJW9 148 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 ZNF207O43670 478 aaKnown RBP5.88□□□□□ -1.47
VCAN-202ENST00000342785 LY6EQ16553 131 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 NEU4Q8WWR8 484 aaPredicted RBP5.88□□□□□ -1.47
VCAN-202ENST00000342785 PLA2G2EQ9NZK7 142 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 ZNRD1Q9P1U0 126 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 PTPN13Q12923 2485 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 TICRRQ7Z2Z1 1910 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 IGHV2-5P01817 119 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 DLX6P56179 175 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 TM4SF20Q53R12 229 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 FBLL1A6NHQ2 334 aaKnown RBP5.88□□□□□ -1.47
VCAN-202ENST00000342785 ITGB1BP1O14713 200 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 KIR3DL3Q8N743 410 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 PMCHL2Q9BQD1 86 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 LAMTOR2Q9Y2Q5 125 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 GAGE10A6NGK3 116 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 PSG1P11464 419 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 CDKN1AP38936 164 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 VDAC2P45880 294 aaPredicted RBP5.88□□□□□ -1.47
VCAN-202ENST00000342785 LY96Q9Y6Y9 160 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 WNK1Q9H4A3 2382 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 TRBV20OR9-2A0A075B6H5 130 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 TNFSF13O75888 250 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 ATP5G2Q06055 141 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 ZNF672Q499Z4 452 aaPredicted RBP5.87□□□□□ -1.47
VCAN-202ENST00000342785 PVRIGQ6DKI7 326 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 SPACA3Q8IXA5 215 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 PSG8Q9UQ74 426 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 IGHV3-66A0A0C4DH42 116 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 SNAI2O43623 268 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 GCSHP23434 173 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 ACTL10Q5JWF8 245 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 Q6AWC8 147 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 ZNF502Q8TBZ5 544 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 IGHV2-26A0A0B4J1V2 119 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 WNT2P09544 360 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 PRB4P10163 310 aaPredicted RBP5.87□□□□□ -1.47
VCAN-202ENST00000342785 ID1P41134 155 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 ATP5J2P56134 94 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 C21orf62-AS1Q17RA5 79 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 C18orf15Q96N68 181 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 KLK15Q9H2R5 256 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 PHLDA3Q9Y5J5 127 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 GZMBP10144 247 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 CFHR2P36980 270 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 HERVK_113P61574 105 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 KLF17Q5JT82 389 aaPredicted RBP5.87□□□□□ -1.47
VCAN-202ENST00000342785 PRR31Q5SQ13 230 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 EEF1AKMT3Q96AZ1 226 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 ZNF414Q96IQ9 312 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 LINC00479Q96M42 142 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 PET117Q6UWS5 81 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 A0A0G2JNJ9 132 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 CYB5R2Q6BCY4 276 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 C8orf46Q8TAG6 207 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 Q9UFV3 132 aa5.87□□□□□ -1.47
VCAN-202ENST00000342785 TCRAP04437 139 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 GPX1P07203 203 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 ZNF134P52741 427 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 LYPD2Q6UXB3 125 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 RAB37Q96AX2 223 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 PMS2P5A8MQ11 134 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 TRGV3P03979 118 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 C1orf194Q5T5A4 169 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 DUX4L9Q6RFH8 374 aaPredicted RBP5.86□□□□□ -1.47
VCAN-202ENST00000342785 ORMDL3Q8N138 153 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 ZNF664Q8N3J9 261 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 A0A1B0GW15 77 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 TNCP24821 2201 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 TRAV9-2A0A087WT02 112 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 IGHV1-3A0A0C4DH29 117 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 C15orf65H3BRN8 121 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 FER1L6-AS1Q8NA97 138 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 A0A1B0GWJ7 208 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 HIST1H1AQ02539 215 aaPredicted RBP5.86□□□□□ -1.47
VCAN-202ENST00000342785 FAM106AQ4KMX7 169 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 PLA2G2CQ5R387 149 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 TRAV8-1A0A0A6YYK1 113 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 A0A1B0GUS0 222 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 IGLV1-44P01699 117 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 LINC00614P0C842 121 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 CLEC19AQ6UXS0 136 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 EXOC3-AS1Q8N2X6 119 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 NUP37Q8NFH4 326 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 SCRT1Q9BWW7 348 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 TMEM14BQ9NUH8 114 aa5.86□□□□□ -1.47
VCAN-202ENST00000342785 GATA4P43694 442 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 OR10J3Q5JRS4 329 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 F11RQ9Y624 299 aaKnown RBP5.85□□□□□ -1.47
VCAN-202ENST00000342785 C7orf71A4D174 169 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 DLX1P56177 255 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 SIGLEC9Q9Y336 463 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 FABP5P3A8MUU1 101 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 FNDC10F2Z333 226 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 M0R381 172 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 NDUFS6O75380 124 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms