RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SRSF1Q07955 248 aaKnown RBP eCLIP14.99□□□□□ -0.01
SMPD1-201ENST00000342245 LINC00696Q6ZRV3 163 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 SHISA9B4DS77 424 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 LAMTOR5O43504 91 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 LTAP01374 205 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 CRYGCP07315 174 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 CD27P26842 260 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 C10orf113Q5VZT2 155 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 Q6ZS92 163 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 PDPNQ86YL7 162 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 PIP4P2Q8N4L2 257 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 TRAV5A0A0B4J249 113 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 FBLL1A6NHQ2 334 aaKnown RBP14.98□□□□□ -0.01
SMPD1-201ENST00000342245 C15orf65H3BRN8 121 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 SLC25A5P05141 298 aaKnown RBP14.98□□□□□ -0.01
SMPD1-201ENST00000342245 NMUP48645 174 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 PRCDQ00LT1 54 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 GAGE13Q4V321 117 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 OR13A1Q8NGR1 328 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 OR1L8Q8NGR8 309 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 ATP6V0E2Q8NHE4 81 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 ZNF414Q96IQ9 312 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 TM2D2Q9BX73 214 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 PSG8Q9UQ74 426 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 ESPL1Q14674 2120 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 SRYQ05066 204 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 ACP7Q6ZNF0 438 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 DDB2Q92466 427 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 FXYD5Q96DB9 178 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 IFI27L2Q9H2X8 130 aa14.98□□□□□ -0.01
SMPD1-201ENST00000342245 ZNF503-AS2A6NEH8 195 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 ZNHIT1O43257 154 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 MOSP00540 346 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 CACNG7P62955 275 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 KLRD1Q13241 179 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 POU2AF1Q16633 256 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 TMEM116Q8NCL8 245 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 A0A1B0GUT8 65 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 CD69Q07108 199 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 CR1LQ2VPA4 569 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 ETDBQ3ZM63 59 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 GNG12Q9UBI6 72 aa14.97□□□□□ -0.01
SMPD1-201ENST00000342245 UNC13CQ8NB66 2214 aa14.96□□□□□ -0.01
SMPD1-201ENST00000342245 TCRBV4S1A1TA0A5B7 111 aa14.96□□□□□ -0.01
SMPD1-201ENST00000342245 VSTM5A8MXK1 200 aa14.96□□□□□ -0.01
SMPD1-201ENST00000342245 NKX2-8O15522 239 aa14.96□□□□□ -0.01
SMPD1-201ENST00000342245 SLC25A17O43808 307 aa14.96□□□□□ -0.01
SMPD1-201ENST00000342245 MT-CO3P00414 261 aa14.96□□□□□ -0.01
SMPD1-201ENST00000342245 PYYP10082 97 aa14.96□□□□□ -0.01
SMPD1-201ENST00000342245 FXYD2P54710 66 aa14.96□□□□□ -0.01
SMPD1-201ENST00000342245 FAM234AQ9H0X4 552 aa14.96□□□□□ -0.01
SMPD1-201ENST00000342245 KLF13Q9Y2Y9 288 aaPredicted RBP14.96□□□□□ -0.01
SMPD1-201ENST00000342245 LINC00312Q9Y6C7 94 aa14.96□□□□□ -0.01
SMPD1-201ENST00000342245 IGHV1-45A0A0A0MS14 117 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 DLL1O00548 723 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 MRPL14Q6P1L8 145 aaKnown RBP14.95□□□□□ -0.02
SMPD1-201ENST00000342245 FAM90A1Q86YD7 464 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 PCP2Q8IVA1 136 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 OR9G1Q8NH87 305 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 RFESDQ8TAC1 157 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 VCX2Q9H322 139 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 IGLL5B9A064 214 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 SPINK8P0C7L1 97 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 INO80CQ6PI98 192 aaPredicted RBP14.95□□□□□ -0.02
SMPD1-201ENST00000342245 SH2D6Q7Z4S9 175 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.95□□□□□ -0.02
SMPD1-201ENST00000342245 C8orf46Q8TAG6 207 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 ARPC1AQ92747 370 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 IMMP1LQ96LU5 166 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 HINT2Q9BX68 163 aa14.95□□□□□ -0.02
SMPD1-201ENST00000342245 HLA-DRB4P13762 266 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 GNG5P63218 68 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 ATP5G2Q06055 141 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 TAL2Q16559 108 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 PRR31Q5SQ13 230 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 MORN5Q5VZ52 161 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 LINC00322Q6ZN03 302 aaPredicted RBP14.94□□□□□ -0.02
SMPD1-201ENST00000342245 ITLN1Q8WWA0 313 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 C18orf15Q96N68 181 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 CHAC1Q9BUX1 264 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 HLA-DRB4X5D2U9 266 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 HBDP02042 147 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 GRPP07492 148 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 CEND1Q8N111 149 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 TMEM190Q8WZ59 177 aa14.94□□□□□ -0.02
SMPD1-201ENST00000342245 A0A096LNJ9 63 aa14.93□□□□□ -0.02
SMPD1-201ENST00000342245 CELA2AP08217 269 aa14.93□□□□□ -0.02
SMPD1-201ENST00000342245 COL8A1P27658 744 aa14.93□□□□□ -0.02
SMPD1-201ENST00000342245 SSBP2P81877 361 aaPredicted RBP14.93□□□□□ -0.02
SMPD1-201ENST00000342245 GAGE5Q13069 117 aa14.93□□□□□ -0.02
SMPD1-201ENST00000342245 GAGE6Q13070 117 aa14.93□□□□□ -0.02
SMPD1-201ENST00000342245 Q6AWC8 147 aa14.93□□□□□ -0.02
SMPD1-201ENST00000342245 FAM110AQ9BQ89 295 aa14.93□□□□□ -0.02
SMPD1-201ENST00000342245 F11RQ9Y624 299 aaKnown RBP14.93□□□□□ -0.02
SMPD1-201ENST00000342245 ASXL3Q9C0F0 2248 aa14.93□□□□□ -0.02
SMPD1-201ENST00000342245 PGPA6NDG6 321 aa14.93□□□□□ -0.02
SMPD1-201ENST00000342245 RPL39P5Q59GN2 51 aa14.93□□□□□ -0.02
SMPD1-201ENST00000342245 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.92□□□□□ -0.02
SMPD1-201ENST00000342245 ACP1P24666 158 aa14.92□□□□□ -0.02
SMPD1-201ENST00000342245 MOB3BQ86TA1 216 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms