RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TMED4Q7Z7H5 227 aa9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 LRTM2Q8N967 370 aa9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 FNDC4Q9H6D8 234 aaPredicted RBP9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 EDA2RQ9HAV5 297 aa9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 PUS1Q9Y606 427 aaKnown RBP eCLIP9.95□□□□□ -0.82
SIRPB3P-201ENST00000340424 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 RYR3Q15413 4870 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 A0A1W2PS18 150 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 SLC25A6P12236 298 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 NPY1RP25929 384 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 APOC4P55056 127 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 RAB14P61106 215 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 LYZL2Q7Z4W2 148 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 OR1S2Q8NGQ3 325 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 DTD1Q8TEA8 209 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 NARS2Q96I59 477 aaKnown RBP9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 RNF2Q99496 336 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 VSIRQ9H7M9 311 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 SELENOKQ9Y6D0 94 aa9.94□□□□□ -0.82
SIRPB3P-201ENST00000340424 TRAV2A0A0B4J234 112 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 TMEM238LA0A1B0GVL6 79 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 L7N2F9 121 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 TSC22D2O75157 780 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 CXCL2P19875 107 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 ANXA7P20073 488 aaKnown RBP9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 VAMP1P23763 118 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 CASC10Q5T4H9 136 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 PRSS54Q6PEW0 395 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 COMMD7Q86VX2 200 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 OR1S1Q8NH92 325 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 SUN5Q8TC36 379 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 METTL26Q96S19 204 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 TMED3Q9Y3Q3 217 aa9.93□□□□□ -0.82
SIRPB3P-201ENST00000340424 KIR2DL5BA0A0G2JN68 375 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 KIR2DL5BA0A0G2JPC4 375 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 FAM90A26D6RGX4 464 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 UBE2CO00762 179 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 SFT2D2O95562 160 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 CFDP00746 253 aaPredicted RBP9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 IFNA10P01566 189 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 NPPCP23582 126 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 S100A11P31949 105 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 YPEL3P61236 119 aaPredicted RBP9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 ODF3L2Q3SX64 289 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 FAM90A2PQ658T7 463 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 KIR2DL5AQ8N109 375 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 EIF4E3Q8N5X7 224 aaKnown RBP9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 KIR2DL5BQ8NHK3 375 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 PRR13Q9NZ81 148 aa9.92□□□□□ -0.82
SIRPB3P-201ENST00000340424 PITX3O75364 302 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 MED6O75586 246 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 IGKV1-17P01599 117 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 IGLC1P0CG04 106 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 CRYBB3P26998 211 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 OR10J1P30954 320 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 RND2P52198 227 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 Q6ZWC4 215 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 TCF24Q7RTU0 167 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 LRRC20Q8TCA0 184 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 Q8WTZ3 238 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 ST8SIA2Q92186 375 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 GRAMD2BQ96HH9 432 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 RBKSQ9H477 322 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 MRPL36Q9P0J6 103 aaKnown RBP9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 TP53TG1Q9Y2A0 90 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 STARD9Q9P2P6 4700 aa9.91□□□□□ -0.82
SIRPB3P-201ENST00000340424 IGHV3-49A0A0A0MS15 119 aa9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 DFFBO76075 338 aa9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 H2BFSP57053 126 aa9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 PPP1R1AQ13522 171 aa9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 ZNF345Q14585 488 aa9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 MLANAQ16655 118 aa9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 TIGITQ495A1 244 aa9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 TMUB2Q71RG4 321 aa9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 TMEM170AQ8WVE7 144 aa9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 CIB3Q96Q77 187 aaPredicted RBP9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 RETNQ9HD89 108 aa9.9□□□□□ -0.82
SIRPB3P-201ENST00000340424 DYNC2H1Q8NCM8 4307 aaKnown RBP9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 CSMD3Q7Z407 3707 aa9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 SACSQ9NZJ4 4579 aa9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 DNASE2O00115 360 aaPredicted RBP9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 NXPH3O95157 252 aa9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 IFNA4P05014 189 aa9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 NMBP08949 121 aa9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 GPX4P36969 197 aaPredicted RBP9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 RAB11AP62491 216 aa9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 RPP30P78346 268 aaKnown RBP9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 FGL1Q08830 312 aa9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 STPG3Q8N7X2 389 aa9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 MS4A6AQ9H2W1 248 aa9.89□□□□□ -0.83
SIRPB3P-201ENST00000340424 IGHV3OR16-13A0A075B7E8 117 aa9.88□□□□□ -0.83
SIRPB3P-201ENST00000340424 IGHV3-74A0A0B4J1X5 117 aa9.88□□□□□ -0.83
SIRPB3P-201ENST00000340424 TOMM40O96008 361 aa9.88□□□□□ -0.83
SIRPB3P-201ENST00000340424 APOHP02749 345 aaPredicted RBP9.88□□□□□ -0.83
SIRPB3P-201ENST00000340424 FABP1P07148 127 aa9.88□□□□□ -0.83
SIRPB3P-201ENST00000340424 OR4E1P0C645 316 aa9.88□□□□□ -0.83
SIRPB3P-201ENST00000340424 NUP62P37198 522 aaPredicted RBP9.88□□□□□ -0.83
SIRPB3P-201ENST00000340424 P2RY1P47900 373 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms