RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 AKR1C1Q04828 323 aa11.42□□□□□ -0.58
UBE3B-201ENST00000340074 FAM90A2PQ658T7 463 aa11.42□□□□□ -0.58
UBE3B-201ENST00000340074 TCF24Q7RTU0 167 aa11.42□□□□□ -0.58
UBE3B-201ENST00000340074 OR10P1Q8NGE3 313 aa11.42□□□□□ -0.58
UBE3B-201ENST00000340074 TRGV9Q99603 122 aa11.42□□□□□ -0.58
UBE3B-201ENST00000340074 WFDC10AQ9H1F0 79 aa11.42□□□□□ -0.58
UBE3B-201ENST00000340074 IGKV3-7A0A075B6H7 116 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 A0A1W2PS18 150 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 SMCO3A2RU48 225 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 A8MZ25 164 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 DFFBO76075 338 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 PVALBP20472 110 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-201ENST00000340074 ARL16Q0P5N6 197 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 OR2F1Q13607 317 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 RNF125Q96EQ8 232 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 ASCL2Q99929 193 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 NMES1Q9C002 83 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 TMEM231Q9H6L2 316 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 C19orf73Q9NVV2 129 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 U3KQE9 123 aa11.41□□□□□ -0.58
UBE3B-201ENST00000340074 OR11H12B2RN74 326 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 FABP1P07148 127 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 HNRNPCP07910 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
UBE3B-201ENST00000340074 CAV2P51636 162 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 H2BFSP57053 126 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 DLK1P80370 383 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 TMEM144Q7Z5S9 345 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 DEFB125Q8N687 156 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 NARS2Q96I59 477 aaKnown RBP11.4□□□□□ -0.58
UBE3B-201ENST00000340074 PBDC1Q9BVG4 233 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 TUBA4BQ9H853 241 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 RABAC1Q9UI14 185 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 ALG5Q9Y673 324 aa11.4□□□□□ -0.58
UBE3B-201ENST00000340074 FAM24AA6NFZ4 105 aa11.39□□□□□ -0.59
UBE3B-201ENST00000340074 CD5P06127 495 aa11.39□□□□□ -0.59
UBE3B-201ENST00000340074 P2RY1P47900 373 aa11.39□□□□□ -0.59
UBE3B-201ENST00000340074 TFPI2P48307 235 aa11.39□□□□□ -0.59
UBE3B-201ENST00000340074 RPL11P62913 178 aaKnown RBP11.39□□□□□ -0.59
UBE3B-201ENST00000340074 LRRC37A5PQ49AS3 106 aa11.39□□□□□ -0.59
UBE3B-201ENST00000340074 SBSPONQ8IVN8 264 aa11.39□□□□□ -0.59
UBE3B-201ENST00000340074 GBGT1Q8N5D6 347 aa11.39□□□□□ -0.59
UBE3B-201ENST00000340074 MGAT4CQ9UBM8 478 aa11.39□□□□□ -0.59
UBE3B-201ENST00000340074 OR4C46A6NHA9 309 aa11.38□□□□□ -0.59
UBE3B-201ENST00000340074 FNDC10F2Z333 226 aa11.38□□□□□ -0.59
UBE3B-201ENST00000340074 DEDDO75618 318 aa11.38□□□□□ -0.59
UBE3B-201ENST00000340074 CST7O76096 145 aa11.38□□□□□ -0.59
UBE3B-201ENST00000340074 LYZP61626 148 aa11.38□□□□□ -0.59
UBE3B-201ENST00000340074 CYCSP99999 105 aaKnown RBP11.38□□□□□ -0.59
UBE3B-201ENST00000340074 TMEM182Q6ZP80 229 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-201ENST00000340074 GRAMD2BQ96HH9 432 aa11.38□□□□□ -0.59
UBE3B-201ENST00000340074 NPVFQ9HCQ7 196 aa11.38□□□□□ -0.59
UBE3B-201ENST00000340074 LYRM2Q9NU23 88 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-201ENST00000340074 UBQLN2Q9UHD9 624 aa11.38□□□□□ -0.59
UBE3B-201ENST00000340074 GATA2P23769 480 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-201ENST00000340074 EIF2B2P49770 351 aaKnown RBP11.37□□□□□ -0.59
UBE3B-201ENST00000340074 RGS21Q2M5E4 152 aa11.37□□□□□ -0.59
UBE3B-201ENST00000340074 C16orf54Q6UWD8 224 aa11.37□□□□□ -0.59
UBE3B-201ENST00000340074 TMEM217Q8N7C4 229 aa11.37□□□□□ -0.59
UBE3B-201ENST00000340074 MS4A6AQ9H2W1 248 aa11.37□□□□□ -0.59
UBE3B-201ENST00000340074 SRD5A3Q9H8P0 318 aa11.37□□□□□ -0.59
UBE3B-201ENST00000340074 IGSF23A1L1A6 192 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 BUB3O43684 328 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 RLN2P04090 185 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 PAFAH1B2P68402 229 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 CYP2G1PQ6ZSU1 146 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 WFDC3Q8IUB2 231 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 TMEM252Q8N6L7 170 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 PPP1R1CQ8WVI7 109 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 GLMPQ8WWB7 406 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 GGACTQ9BVM4 153 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 OR5AC2Q9NZP5 309 aa11.36□□□□□ -0.59
UBE3B-201ENST00000340074 RBMY1BA6NDE4 496 aaKnown RBP11.35□□□□□ -0.59
UBE3B-201ENST00000340074 RBMY1EA6NEQ0 496 aaKnown RBP11.35□□□□□ -0.59
UBE3B-201ENST00000340074 H0YIZ8 118 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 DNASE2O00115 360 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-201ENST00000340074 CFDP00746 253 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-201ENST00000340074 RBMY1DP0C7P1 496 aaKnown RBP11.35□□□□□ -0.59
UBE3B-201ENST00000340074 NHLRC4P0CG21 123 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-201ENST00000340074 SULT1A1P50225 295 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 SLC38A11Q08AI6 406 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 ODF3L2Q3SX64 289 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 TEPPQ6URK8 271 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 BPIFCQ8NFQ6 507 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 CITED4Q96RK1 184 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 E5RGE8 158 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 ORM2P19652 201 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 CXCL3P19876 107 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 LINC00322Q6ZN03 302 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-201ENST00000340074 STX12Q86Y82 276 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 STPG3Q8N7X2 389 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 STXBP6Q8NFX7 210 aa11.35□□□□□ -0.59
UBE3B-201ENST00000340074 AGRNO00468 2067 aa11.34□□□□□ -0.59
UBE3B-201ENST00000340074 HELTA6NFD8 242 aa11.34□□□□□ -0.59
UBE3B-201ENST00000340074 S100A11P31949 105 aa11.34□□□□□ -0.59
UBE3B-201ENST00000340074 NUP62P37198 522 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-201ENST00000340074 HAGHQ16775 308 aa11.34□□□□□ -0.59
UBE3B-201ENST00000340074 PPP1R14BQ96C90 147 aa11.34□□□□□ -0.59
UBE3B-201ENST00000340074 FAM110AQ9BQ89 295 aa11.34□□□□□ -0.59
UBE3B-201ENST00000340074 MED28Q9H204 178 aa11.34□□□□□ -0.59
UBE3B-201ENST00000340074 PFDN2Q9UHV9 154 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms