RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 PDZD11Q5EBL8 140 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 GFI1BQ5VTD9 330 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 Q8N9W7 124 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 C22orf15Q8WYQ4 148 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 FXYD5Q96DB9 178 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 TMEM242Q9NWH2 141 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 TENM4Q6N022 2769 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 TEX15Q9BXT5 2789 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 IGHV7-81A0A0B4J1V7 117 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 TRAV40A0A0B4J280 105 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 OR2J3O76001 311 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 EGR2P11161 476 aaPredicted RBP12.18□□□□□ -0.46
MBD1-203ENST00000339998 NDUFA6P56556 154 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 CENPWQ5EE01 88 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 CCDC144NLQ6NUI1 221 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 MRPL41Q8IXM3 137 aaKnown RBP12.18□□□□□ -0.46
MBD1-203ENST00000339998 MXRA5Q9NR99 2828 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 C10orf105Q8TEF2 133 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 TRGV9Q99603 122 aa12.18□□□□□ -0.46
MBD1-203ENST00000339998 HELTA6NFD8 242 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST1H2BKO60814 126 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST1H2BJP06899 126 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 FRMD6-AS1P0C7T7 363 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 IGHV4-38-2P0DP08 117 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST1H2BOP23527 126 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST1H2BBP33778 126 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST1H2BDP58876 126 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 BPIFB3P59826 476 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 SELENOTP62341 195 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST1H2BCP62807 126 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST2H2BEQ16778 126 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 ECSCRQ19T08 205 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.17□□□□□ -0.46
MBD1-203ENST00000339998 MINOS1Q5TGZ0 78 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 ZNF562Q6V9R5 426 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 OR1L4Q8NGR5 311 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST1H2BHQ93079 126 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 SFRP2Q96HF1 295 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 PFDN5Q99471 154 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST1H2BNQ99877 126 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 HIST1H2BMQ99879 126 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 RASL11BQ9BPW5 248 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 KLF2Q9Y5W3 355 aaPredicted RBP12.17□□□□□ -0.46
MBD1-203ENST00000339998 MINOS1-NBL1R4GNA1 71 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 G3V318 75 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 NPFFO15130 113 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 MRPL32Q9BYC8 188 aaKnown RBP12.17□□□□□ -0.46
MBD1-203ENST00000339998 CTDSP1Q9GZU7 261 aa12.17□□□□□ -0.46
MBD1-203ENST00000339998 RNASE7Q9H1E1 156 aaKnown RBP12.17□□□□□ -0.46
MBD1-203ENST00000339998 HYPMO75409 117 aa12.16□□□□□ -0.46
MBD1-203ENST00000339998 Q71RC1 249 aaPredicted RBP12.16□□□□□ -0.46
MBD1-203ENST00000339998 OR5B12Q96R08 314 aa12.16□□□□□ -0.46
MBD1-203ENST00000339998 PIMREGQ9BSJ6 248 aa12.16□□□□□ -0.46
MBD1-203ENST00000339998 APCP25054 2843 aa12.16□□□□□ -0.46
MBD1-203ENST00000339998 NDUFB8O95169 186 aa12.16□□□□□ -0.46
MBD1-203ENST00000339998 TRGC1P0CF51 173 aa12.16□□□□□ -0.46
MBD1-203ENST00000339998 TEX38Q6PEX7 206 aa12.16□□□□□ -0.46
MBD1-203ENST00000339998 ASCL2Q99929 193 aa12.16□□□□□ -0.46
MBD1-203ENST00000339998 C19orf24Q9BVV8 132 aa12.16□□□□□ -0.46
MBD1-203ENST00000339998 KRTAP10-9P60411 292 aa12.15□□□□□ -0.46
MBD1-203ENST00000339998 CLEC2AQ6UVW9 174 aa12.15□□□□□ -0.46
MBD1-203ENST00000339998 SGMS2Q8NHU3 365 aa12.15□□□□□ -0.46
MBD1-203ENST00000339998 C17orf77Q96MU5 243 aa12.15□□□□□ -0.46
MBD1-203ENST00000339998 TMUB1Q9BVT8 246 aa12.15□□□□□ -0.46
MBD1-203ENST00000339998 CORTO00230 105 aa12.15□□□□□ -0.46
MBD1-203ENST00000339998 SPINK4O60575 86 aa12.15□□□□□ -0.46
MBD1-203ENST00000339998 RD3LP0DJH9 198 aa12.15□□□□□ -0.46
MBD1-203ENST00000339998 C11orf52Q96A22 123 aa12.15□□□□□ -0.46
MBD1-203ENST00000339998 TRBV24-1A0A075B6N3 115 aa12.15□□□□□ -0.47
MBD1-203ENST00000339998 MDFIC2A0A1B0GVS7 189 aa12.15□□□□□ -0.47
MBD1-203ENST00000339998 FAM106CPP0CH98 169 aa12.15□□□□□ -0.47
MBD1-203ENST00000339998 MGST1P10620 155 aaKnown RBP12.15□□□□□ -0.47
MBD1-203ENST00000339998 SONP18583 2426 aaKnown RBP12.15□□□□□ -0.47
MBD1-203ENST00000339998 CREBBPQ92793 2442 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 OR2T8A6NH00 312 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 PCP4L1A6NKN8 68 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 F8W735 103 aaPredicted RBP12.14□□□□□ -0.47
MBD1-203ENST00000339998 CA1P00915 261 aaPredicted RBP12.14□□□□□ -0.47
MBD1-203ENST00000339998 AVPP01185 164 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 GNG4P50150 75 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 SLC35B1P78383 322 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 EBI3Q14213 229 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 ATP6V0E1O15342 81 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 IL4P05112 153 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 LY6EQ16553 131 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 ZNF329Q86UD4 541 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 ANAPC16Q96DE5 110 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 TXNDC17Q9BRA2 123 aa12.14□□□□□ -0.47
MBD1-203ENST00000339998 IGLV11-55A0A075B6I3 123 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 ELOA3CA0A087WX78 387 aaPredicted RBP12.13□□□□□ -0.47
MBD1-203ENST00000339998 A0A1W2PRE2 83 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 PGPA6NDG6 321 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 ISLRO14498 428 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 PAX8Q06710 450 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 MS4A10Q96PG2 267 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 SLC25A39Q9BZJ4 359 aaPredicted RBP12.13□□□□□ -0.47
MBD1-203ENST00000339998 AP4M1O00189 453 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 NBEAP1P0C6P0 100 aa12.13□□□□□ -0.47
MBD1-203ENST00000339998 S100PP25815 95 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms