RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 MED28Q9H204 178 aa9.67□□□□□ -0.86
SRSF3-201ENST00000339436 OR5AC2Q9NZP5 309 aa9.67□□□□□ -0.86
SRSF3-201ENST00000339436 IGHV3OR16-13A0A075B7E8 117 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 IGHV3-74A0A0B4J1X5 117 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 TRAV25A0A0B4J276 109 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 E5RGE8 158 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 H0YIZ8 118 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 CST7O76096 145 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 APOHP02749 345 aaPredicted RBP9.66□□□□□ -0.86
SRSF3-201ENST00000339436 PET100P0DJ07 73 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 CRYBB3P26998 211 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 BMI1P35226 326 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 SULT1A1P50225 295 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 SLC38A11Q08AI6 406 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 STX12Q86Y82 276 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 ST8SIA2Q92186 375 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 RNF125Q96EQ8 232 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 RNF2Q99496 336 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 GGACTQ9BVM4 153 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 VSIRQ9H7M9 311 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 ZNF785A8K8V0 405 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 MPC2O95563 127 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 RLN2P04090 185 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 NPPCP23582 126 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 GUCA2BQ16661 112 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 RBPMS2Q6ZRY4 209 aaKnown RBP9.66□□□□□ -0.86
SRSF3-201ENST00000339436 GTSCR1Q86UQ5 136 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 TMEM217Q8N7C4 229 aa9.66□□□□□ -0.86
SRSF3-201ENST00000339436 SPAG8Q99932 426 aaPredicted RBP9.66□□□□□ -0.86
SRSF3-201ENST00000339436 LSM4Q9Y4Z0 139 aaKnown RBP9.66□□□□□ -0.86
SRSF3-201ENST00000339436 IGHV3-66A0A0C4DH42 116 aa9.65□□□□□ -0.86
SRSF3-201ENST00000339436 TSPAN4O14817 238 aa9.65□□□□□ -0.86
SRSF3-201ENST00000339436 HNRNPCP07910 306 aaKnown RBP eCLIP9.65□□□□□ -0.861e-20■■■■□ 20.6
SRSF3-201ENST00000339436 P2RY1P47900 373 aa9.65□□□□□ -0.86
SRSF3-201ENST00000339436 HBG1P69891 147 aa9.65□□□□□ -0.86
SRSF3-201ENST00000339436 HBG2P69892 147 aa9.65□□□□□ -0.86
SRSF3-201ENST00000339436 OR2F1Q13607 317 aa9.65□□□□□ -0.86
SRSF3-201ENST00000339436 LAMTOR1Q6IAA8 161 aa9.65□□□□□ -0.86
SRSF3-201ENST00000339436 NARS2Q96I59 477 aaKnown RBP9.65□□□□□ -0.86
SRSF3-201ENST00000339436 TMEM231Q9H6L2 316 aa9.65□□□□□ -0.86
SRSF3-201ENST00000339436 U3KQE9 123 aa9.65□□□□□ -0.86
SRSF3-201ENST00000339436 A0A1W2PS18 150 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 CD81P60033 236 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 LYZP61626 148 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 VWC2Q2TAL6 325 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 LCE2DQ5TA82 110 aaPredicted RBP9.64□□□□□ -0.87
SRSF3-201ENST00000339436 FAM90A2PQ658T7 463 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 Q8N1Y9 231 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 LILRB2Q8N423 598 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 RNF126Q9BV68 326 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 PBDC1Q9BVG4 233 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 NPVFQ9HCQ7 196 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 MBD2Q9UBB5 411 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 RABAC1Q9UI14 185 aa9.64□□□□□ -0.87
SRSF3-201ENST00000339436 CFDP00746 253 aaPredicted RBP9.63□□□□□ -0.87
SRSF3-201ENST00000339436 CD5P06127 495 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 GIPP09681 153 aaPredicted RBP9.63□□□□□ -0.87
SRSF3-201ENST00000339436 S100A11P31949 105 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 EIF2B2P49770 351 aaKnown RBP9.63□□□□□ -0.87
SRSF3-201ENST00000339436 EWSR1Q01844 656 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRSF3-201ENST00000339436 BAXQ07812 192 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 TEPPQ6URK8 271 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 TMEM182Q6ZP80 229 aaPredicted RBP9.63□□□□□ -0.87
SRSF3-201ENST00000339436 CYP2G1PQ6ZSU1 146 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 TCF24Q7RTU0 167 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 BPIFCQ8NFQ6 507 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 ASB13Q8WXK3 278 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 TMEM147Q9BVK8 224 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 SLC25A31Q9H0C2 315 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 UQCC1Q9NVA1 299 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
SRSF3-201ENST00000339436 STAB2Q8WWQ8 2551 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 HUWE1Q7Z6Z7 4374 aaKnown RBP9.62□□□□□ -0.87
SRSF3-201ENST00000339436 UBE2L5PA0A1B0GUS4 154 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 DFFBO76075 338 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 CD7P09564 240 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 GATA2P23769 480 aaPredicted RBP9.62□□□□□ -0.87
SRSF3-201ENST00000339436 NUP62P37198 522 aaPredicted RBP9.62□□□□□ -0.87
SRSF3-201ENST00000339436 SELENOTP62341 195 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 ZNF546Q86UE3 836 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 GLMPQ8WWB7 406 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 GRAMD2BQ96HH9 432 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 NEURL2Q9BR09 285 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 TENM3Q9P273 2699 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 AGRNO00468 2067 aa9.62□□□□□ -0.87
SRSF3-201ENST00000339436 BUB3O43684 328 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 LINC00869P0C866 280 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 LYL1P12980 280 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 NHLH2Q02577 135 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 DEFB121Q5J5C9 76 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 C16orf54Q6UWD8 224 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 OR5C1Q8NGR4 320 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 MGST2Q99735 147 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 WDR83OSQ9Y284 106 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 IGKV3-7A0A075B6H7 116 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 OR4C46A6NHA9 309 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 AGPAT2O15120 278 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 IGHV4-30-4P0DP06 118 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 ATP6V1FQ16864 119 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 STPG3Q8N7X2 389 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms