RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 OR10J3Q5JRS4 329 aa11.5□□□□□ -0.57
PCDH8-201ENST00000338862 LYNX1G3V0Z9 82 aa11.5□□□□□ -0.57
PCDH8-201ENST00000338862 LYNX1P0DP58 116 aa11.5□□□□□ -0.57
PCDH8-201ENST00000338862 ZNF714Q96N38 554 aa11.5□□□□□ -0.57
PCDH8-201ENST00000338862 ADGRG4Q8IZF6 3080 aa11.5□□□□□ -0.57
PCDH8-201ENST00000338862 OR2T8A6NH00 312 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 IGKV3-15P01624 115 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 C17orf58Q2M2W7 97 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 C18orf15Q96N68 181 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 GAL3ST2Q9H3Q3 398 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 RNASE2P10153 161 aaKnown RBP11.49□□□□□ -0.57
PCDH8-201ENST00000338862 PERPQ96FX8 193 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 GRAMD2BQ96HH9 432 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 ZNF71Q9NQZ8 489 aaPredicted RBP11.49□□□□□ -0.57
PCDH8-201ENST00000338862 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 FOXA2Q9Y261 457 aaPredicted RBP11.49□□□□□ -0.57
PCDH8-201ENST00000338862 A0A1W2PRE2 83 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 PSG1P11464 419 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 COMPP49747 757 aaPredicted RBP11.49□□□□□ -0.57
PCDH8-201ENST00000338862 PRR20EP86478 221 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 PRR20CP86479 221 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 PRR20DP86480 221 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 PRR20BP86481 221 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 PRR20AP86496 221 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 COX19Q49B96 90 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
PCDH8-201ENST00000338862 COL5A1P20908 1838 aaPredicted RBP11.49□□□□□ -0.57
PCDH8-201ENST00000338862 TET2Q6N021 2002 aaPredicted RBP11.48□□□□□ -0.57
PCDH8-201ENST00000338862 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.48□□□□□ -0.57
PCDH8-201ENST00000338862 IGHV3-23P01764 117 aa11.48□□□□□ -0.57
PCDH8-201ENST00000338862 CT45A10P0DMU9 189 aa11.48□□□□□ -0.57
PCDH8-201ENST00000338862 PRR7Q8TB68 274 aa11.48□□□□□ -0.57
PCDH8-201ENST00000338862 KALRNO60229 2985 aa11.48□□□□□ -0.57
PCDH8-201ENST00000338862 LINC00614P0C842 121 aa11.48□□□□□ -0.57
PCDH8-201ENST00000338862 TDGF1P13385 188 aa11.48□□□□□ -0.57
PCDH8-201ENST00000338862 LRRC10Q5BKY1 277 aa11.48□□□□□ -0.57
PCDH8-201ENST00000338862 C1orf159Q96HA4 380 aa11.48□□□□□ -0.57
PCDH8-201ENST00000338862 CHRDL1Q9BU40 450 aa11.48□□□□□ -0.57
PCDH8-201ENST00000338862 FNDC4Q9H6D8 234 aaPredicted RBP11.48□□□□□ -0.57
PCDH8-201ENST00000338862 EPDR1Q9UM22 224 aa11.48□□□□□ -0.57
PCDH8-201ENST00000338862 APOHP02749 345 aaPredicted RBP11.47□□□□□ -0.57
PCDH8-201ENST00000338862 ARL6IP6Q8N6S5 226 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 TACC2O95359 2948 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 IGHV3OR16-13A0A075B7E8 117 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 IGHV3-74A0A0B4J1X5 117 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 J3QW42 95 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 NEUROG1Q92886 237 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 FBXL15Q9H469 300 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 MRPL36Q9P0J6 103 aaKnown RBP11.47□□□□□ -0.57
PCDH8-201ENST00000338862 INSIG2Q9Y5U4 225 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 J3KRW8 73 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 IGHV1-46P01743 117 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 TNFRSF1AP19438 455 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 RIPPLY3P57055 190 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 TMUB1Q9BVT8 246 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 SLC25A2Q9BXI2 301 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 Q9H3A6 140 aa11.47□□□□□ -0.57
PCDH8-201ENST00000338862 ARHGAP32A7KAX9 2087 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 ARF6P62330 175 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 RPL24P83731 157 aaKnown RBP11.46□□□□□ -0.57
PCDH8-201ENST00000338862 WT1-ASQ06250 92 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 OR4C13Q8NGP0 309 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 RPP21Q9H633 154 aaKnown RBP11.46□□□□□ -0.57
PCDH8-201ENST00000338862 TRAV9-1A0A075B6T8 112 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 CGB1A6NKQ9 187 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 CNTFRP26992 372 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 RPL27AP46776 148 aaKnown RBP11.46□□□□□ -0.57
PCDH8-201ENST00000338862 UBE2V1Q13404 147 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 KLF17Q5JT82 389 aaPredicted RBP11.46□□□□□ -0.57
PCDH8-201ENST00000338862 BPIFA4PQ86YQ2 179 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 GPR82Q96P67 336 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 COX11Q9Y6N1 276 aa11.46□□□□□ -0.57
PCDH8-201ENST00000338862 ANKHD1Q8IWZ3 2542 aaKnown RBP11.46□□□□□ -0.58
PCDH8-201ENST00000338862 TRGV8A0A0C4DH27 118 aa11.46□□□□□ -0.58
PCDH8-201ENST00000338862 GLRXP35754 106 aa11.46□□□□□ -0.58
PCDH8-201ENST00000338862 GDF5OSQ5U4N7 250 aa11.46□□□□□ -0.58
PCDH8-201ENST00000338862 TEX45Q8NA69 505 aa11.46□□□□□ -0.58
PCDH8-201ENST00000338862 RASL11BQ9BPW5 248 aa11.46□□□□□ -0.58
PCDH8-201ENST00000338862 DSCAMO60469 2012 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 NDUFB8O95169 186 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 CD59P13987 128 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 FCGR2BP31994 310 aaPredicted RBP11.45□□□□□ -0.58
PCDH8-201ENST00000338862 EIF4EBP1Q13541 118 aaPredicted RBP11.45□□□□□ -0.58
PCDH8-201ENST00000338862 ZNF329Q86UD4 541 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 ONECUT1Q9UBC0 465 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 RPUSD1Q9UJJ7 312 aaKnown RBP11.45□□□□□ -0.58
PCDH8-201ENST00000338862 ZNF257Q9Y2Q1 563 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 PPIAL4EA0A075B759 164 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 VSTM5A8MXK1 200 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 PPIAL4FP0DN26 164 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 IGFL4Q6B9Z1 124 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 LYPD2Q6UXB3 125 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 VSTM2AQ8TAG5 236 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 C11orf52Q96A22 123 aa11.45□□□□□ -0.58
PCDH8-201ENST00000338862 MAP1AP78559 2803 aaPredicted RBP11.44□□□□□ -0.58
PCDH8-201ENST00000338862 NCBP2LA6PVI3 153 aaKnown RBP11.44□□□□□ -0.58
PCDH8-201ENST00000338862 M0R3E3 92 aa11.44□□□□□ -0.58
PCDH8-201ENST00000338862 ZNF474Q6S9Z5 364 aaPredicted RBP11.44□□□□□ -0.58
PCDH8-201ENST00000338862 RPEQ96AT9 228 aa11.44□□□□□ -0.58
PCDH8-201ENST00000338862 HIGD1AQ9Y241 93 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms