RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 RPP30P78346 268 aaKnown RBP12.95□□□□□ -0.34
CMTM1-204ENST00000336328 ACTL10Q5JWF8 245 aa12.95□□□□□ -0.34
CMTM1-204ENST00000336328 SLC35E1Q96K37 410 aa12.95□□□□□ -0.34
CMTM1-204ENST00000336328 RAB40CQ96S21 281 aa12.95□□□□□ -0.34
CMTM1-204ENST00000336328 C1QTNF4Q9BXJ3 329 aa12.95□□□□□ -0.34
CMTM1-204ENST00000336328 NRN1Q9NPD7 142 aa12.95□□□□□ -0.34
CMTM1-204ENST00000336328 FBXL17Q9UF56 701 aa12.95□□□□□ -0.34
CMTM1-204ENST00000336328 ZFP92A6NM28 416 aa12.94□□□□□ -0.34
CMTM1-204ENST00000336328 C11orf94C9JXX5 98 aa12.94□□□□□ -0.34
CMTM1-204ENST00000336328 NANOS2P60321 138 aaKnown RBP12.94□□□□□ -0.34
CMTM1-204ENST00000336328 USF2Q15853 346 aaPredicted RBP12.94□□□□□ -0.34
CMTM1-204ENST00000336328 PSMG4Q5JS54 123 aa12.94□□□□□ -0.34
CMTM1-204ENST00000336328 LGALS9CQ6DKI2 356 aa12.94□□□□□ -0.34
CMTM1-204ENST00000336328 OR8G2PQ6IF36 304 aa12.94□□□□□ -0.34
CMTM1-204ENST00000336328 SIGLEC15Q6ZMC9 328 aa12.94□□□□□ -0.34
CMTM1-204ENST00000336328 TMED4Q7Z7H5 227 aa12.94□□□□□ -0.34
CMTM1-204ENST00000336328 HRH4Q9H3N8 390 aa12.94□□□□□ -0.34
CMTM1-204ENST00000336328 PRR13Q9NZ81 148 aa12.94□□□□□ -0.34
CMTM1-204ENST00000336328 CCDC160A6NGH7 325 aa12.93□□□□□ -0.34
CMTM1-204ENST00000336328 KNCNA6PVL3 124 aa12.93□□□□□ -0.34
CMTM1-204ENST00000336328 SNRPGP15A8MWD9 76 aa12.93□□□□□ -0.34
CMTM1-204ENST00000336328 FAM90A26D6RGX4 464 aa12.93□□□□□ -0.34
CMTM1-204ENST00000336328 LRTM2Q8N967 370 aa12.93□□□□□ -0.34
CMTM1-204ENST00000336328 C2CD4CQ8TF44 421 aa12.93□□□□□ -0.34
CMTM1-204ENST00000336328 RNF125Q96EQ8 232 aa12.93□□□□□ -0.34
CMTM1-204ENST00000336328 CIB3Q96Q77 187 aaPredicted RBP12.93□□□□□ -0.34
CMTM1-204ENST00000336328 TMED3Q9Y3Q3 217 aa12.93□□□□□ -0.34
CMTM1-204ENST00000336328 CFDP00746 253 aaPredicted RBP12.92□□□□□ -0.34
CMTM1-204ENST00000336328 VAMP1P23763 118 aa12.92□□□□□ -0.34
CMTM1-204ENST00000336328 ID1P41134 155 aa12.92□□□□□ -0.34
CMTM1-204ENST00000336328 GAMTQ14353 236 aa12.92□□□□□ -0.34
CMTM1-204ENST00000336328 ZNF705EA8MWA4 302 aaPredicted RBP12.91□□□□□ -0.34
CMTM1-204ENST00000336328 DEFB4AO15263 64 aa12.91□□□□□ -0.34
CMTM1-204ENST00000336328 PITX3O75364 302 aa12.91□□□□□ -0.34
CMTM1-204ENST00000336328 GIG44P09565 113 aaPredicted RBP12.91□□□□□ -0.34
CMTM1-204ENST00000336328 S100A7P31151 101 aa12.91□□□□□ -0.34
CMTM1-204ENST00000336328 C1orf194Q5T5A4 169 aa12.91□□□□□ -0.34
CMTM1-204ENST00000336328 PBDC1Q9BVG4 233 aa12.91□□□□□ -0.34
CMTM1-204ENST00000336328 TBC1D24Q9ULP9 559 aa12.91□□□□□ -0.34
CMTM1-204ENST00000336328 NKX2-1P43699 371 aaPredicted RBP12.9□□□□□ -0.34
CMTM1-204ENST00000336328 GGNBP1Q5YKI7 109 aa12.9□□□□□ -0.34
CMTM1-204ENST00000336328 Q8NAQ8 132 aa12.9□□□□□ -0.34
CMTM1-204ENST00000336328 TRIM63Q969Q1 353 aa12.9□□□□□ -0.34
CMTM1-204ENST00000336328 SFT2D2O95562 160 aa12.89□□□□□ -0.35
CMTM1-204ENST00000336328 UBE2MP61081 183 aaKnown RBP12.89□□□□□ -0.35
CMTM1-204ENST00000336328 SPANXN2Q5MJ10 180 aa12.89□□□□□ -0.35
CMTM1-204ENST00000336328 SAMD13Q5VXD3 122 aa12.89□□□□□ -0.35
CMTM1-204ENST00000336328 PPP1R14BQ96C90 147 aa12.89□□□□□ -0.35
CMTM1-204ENST00000336328 TRGV9Q99603 122 aa12.89□□□□□ -0.35
CMTM1-204ENST00000336328 PAIP2BQ9ULR5 123 aaKnown RBP12.89□□□□□ -0.35
CMTM1-204ENST00000336328 V9GYH0 126 aa12.89□□□□□ -0.35
CMTM1-204ENST00000336328 IGHV4-28A0A0C4DH34 117 aa12.88□□□□□ -0.35
CMTM1-204ENST00000336328 H3BMM0 161 aa12.88□□□□□ -0.35
CMTM1-204ENST00000336328 INPP1P49441 399 aa12.88□□□□□ -0.35
CMTM1-204ENST00000336328 CSNK1G2-AS1Q8NCQ2 148 aa12.88□□□□□ -0.35
CMTM1-204ENST00000336328 NAP1L6A6NFF2 107 aa12.87□□□□□ -0.35
CMTM1-204ENST00000336328 SYNGR2O43760 224 aa12.87□□□□□ -0.35
CMTM1-204ENST00000336328 RBMY1A1P0DJD3 496 aaKnown RBP12.87□□□□□ -0.35
CMTM1-204ENST00000336328 RBMY1CP0DJD4 496 aa12.87□□□□□ -0.35
CMTM1-204ENST00000336328 LYZP61626 148 aa12.87□□□□□ -0.35
CMTM1-204ENST00000336328 ZNF90Q03938 601 aa12.87□□□□□ -0.35
CMTM1-204ENST00000336328 PLECQ15149 4684 aaKnown RBP12.87□□□□□ -0.35
CMTM1-204ENST00000336328 RBMY1FQ15415 496 aaKnown RBP12.87□□□□□ -0.35
CMTM1-204ENST00000336328 SPATA31B1PQ5VZV4 182 aa12.87□□□□□ -0.35
CMTM1-204ENST00000336328 CCDC190Q86UF4 302 aa12.87□□□□□ -0.35
CMTM1-204ENST00000336328 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
CMTM1-204ENST00000336328 IGKV1D-37A0A075B6S9 117 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 TRAV10A0A0B4J240 114 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 IGLL5B9A064 214 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 ZNF701M0R085 212 aaPredicted RBP12.86□□□□□ -0.35
CMTM1-204ENST00000336328 IAPPP10997 89 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 HLA-DRB4P13762 266 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 C4BPBP20851 252 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 HLA-DMBP28068 263 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 ZNF79Q15937 498 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 CLEC5AQ9NY25 188 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 SLC45A2Q9UMX9 530 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 HLA-DRB4X5D2U9 266 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 X6R8D5 127 aa12.86□□□□□ -0.35
CMTM1-204ENST00000336328 WRBO00258 174 aa12.85□□□□□ -0.35
CMTM1-204ENST00000336328 HOXB5P09067 269 aa12.85□□□□□ -0.35
CMTM1-204ENST00000336328 PSMB3P49720 205 aa12.85□□□□□ -0.35
CMTM1-204ENST00000336328 MEOX2P50222 304 aa12.85□□□□□ -0.35
CMTM1-204ENST00000336328 PPP1R1AQ13522 171 aa12.85□□□□□ -0.35
CMTM1-204ENST00000336328 THAP8Q8NA92 274 aa12.85□□□□□ -0.35
CMTM1-204ENST00000336328 COQ8AQ8NI60 647 aa12.85□□□□□ -0.35
CMTM1-204ENST00000336328 LINC00052Q96N35 136 aa12.85□□□□□ -0.35
CMTM1-204ENST00000336328 CLUHP3Q96NS8 147 aa12.85□□□□□ -0.35
CMTM1-204ENST00000336328 XCL2Q9UBD3 114 aa12.85□□□□□ -0.35
CMTM1-204ENST00000336328 ALMS1Q8TCU4 4167 aa12.84□□□□□ -0.35
CMTM1-204ENST00000336328 SMIM9A6NGZ8 99 aa12.84□□□□□ -0.35
CMTM1-204ENST00000336328 IFNA21P01568 189 aa12.84□□□□□ -0.35
CMTM1-204ENST00000336328 OR2F1Q13607 317 aa12.84□□□□□ -0.35
CMTM1-204ENST00000336328 FOXI2Q6ZQN5 318 aa12.84□□□□□ -0.35
CMTM1-204ENST00000336328 BPIFCQ8NFQ6 507 aa12.84□□□□□ -0.35
CMTM1-204ENST00000336328 STRAPQ9Y3F4 350 aaKnown RBP12.84□□□□□ -0.35
CMTM1-204ENST00000336328 TMEM189A5PLL7 270 aa12.83□□□□□ -0.36
CMTM1-204ENST00000336328 CENPXA8MT69 81 aa12.83□□□□□ -0.36
CMTM1-204ENST00000336328 ISLRO14498 428 aa12.83□□□□□ -0.36
CMTM1-204ENST00000336328 GALR1P47211 349 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms