RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 IL15RAQ13261 267 aa12.9□□□□□ -0.34
HDAC5-202ENST00000336057 NIT1Q86X76 327 aa12.9□□□□□ -0.34
HDAC5-202ENST00000336057 CACNA1HO95180 2353 aa12.9□□□□□ -0.34
HDAC5-202ENST00000336057 ASIPP42127 132 aa12.9□□□□□ -0.34
HDAC5-202ENST00000336057 SNRPD3P62318 126 aaKnown RBP12.9□□□□□ -0.34
HDAC5-202ENST00000336057 DDB2Q92466 427 aa12.9□□□□□ -0.34
HDAC5-202ENST00000336057 PSMG4Q5JS54 123 aa12.9□□□□□ -0.34
HDAC5-202ENST00000336057 FAM169BQ8N8A8 192 aa12.9□□□□□ -0.34
HDAC5-202ENST00000336057 LGALS3P17931 250 aaKnown RBP12.89□□□□□ -0.35
HDAC5-202ENST00000336057 ZNF56Q15929 161 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 LHFPL4Q7Z7J7 247 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 FOXC2Q99958 501 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 SMAGPQ0VAQ4 97 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 C1orf194Q5T5A4 169 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 CCL19Q99731 98 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 ASCL2Q99929 193 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 NUP210Q8TEM1 1887 aaPredicted RBP12.89□□□□□ -0.35
HDAC5-202ENST00000336057 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.89□□□□□ -0.35
HDAC5-202ENST00000336057 PSG1P11464 419 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 COX6B1P14854 86 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 CDKN1AP38936 164 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 CHCHD1Q96BP2 118 aaKnown RBP12.89□□□□□ -0.35
HDAC5-202ENST00000336057 SLC50A1Q9BRV3 221 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 RAXQ9Y2V3 346 aa12.89□□□□□ -0.35
HDAC5-202ENST00000336057 H7C2G1 150 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 PPP1R17O96001 155 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 NUP37Q8NFH4 326 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 TRGV9Q99603 122 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 FNDC10F2Z333 226 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 IGKV1-39P01597 117 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 IGKV1D-39P04432 117 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 ZNF474Q6S9Z5 364 aaPredicted RBP12.88□□□□□ -0.35
HDAC5-202ENST00000336057 RASL11AQ6T310 242 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 OR5AN1Q8NGI8 311 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 ZNF503-AS2A6NEH8 195 aa12.88□□□□□ -0.35
HDAC5-202ENST00000336057 SRSF6Q13247 344 aaKnown RBP12.88□□□□□ -0.35
HDAC5-202ENST00000336057 ITGB1BP1O14713 200 aa12.87□□□□□ -0.35
HDAC5-202ENST00000336057 IGHV1-3A0A0C4DH29 117 aa12.87□□□□□ -0.35
HDAC5-202ENST00000336057 IGKV3-20P01619 116 aa12.87□□□□□ -0.35
HDAC5-202ENST00000336057 COX6CP09669 75 aa12.87□□□□□ -0.35
HDAC5-202ENST00000336057 RNASE2P10153 161 aaKnown RBP12.87□□□□□ -0.35
HDAC5-202ENST00000336057 TTC9CQ8N5M4 171 aa12.87□□□□□ -0.35
HDAC5-202ENST00000336057 SPTAN1Q13813 2472 aaKnown RBP12.87□□□□□ -0.35
HDAC5-202ENST00000336057 IGKV1-16P04430 117 aa12.87□□□□□ -0.35
HDAC5-202ENST00000336057 TCRAP04437 139 aa12.87□□□□□ -0.35
HDAC5-202ENST00000336057 PRSS2P07478 247 aa12.87□□□□□ -0.35
HDAC5-202ENST00000336057 ZNF672Q499Z4 452 aaPredicted RBP12.87□□□□□ -0.35
HDAC5-202ENST00000336057 PMS2P5A8MQ11 134 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 ERVK11-1P61568 191 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 RHOGP84095 191 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 SCGB3A1Q96QR1 104 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 SLC25A39Q9BZJ4 359 aaPredicted RBP12.86□□□□□ -0.35
HDAC5-202ENST00000336057 COL6A6A6NMZ7 2263 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 HBDP02042 147 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 THBDP07204 575 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 PFN1P07737 140 aaKnown RBP12.86□□□□□ -0.35
HDAC5-202ENST00000336057 WDR86Q86TI4 376 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 RAX2Q96IS3 184 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 A0A1B0GWJ7 208 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 WNT2P09544 360 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 PCP4P48539 62 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 NEUROG1Q92886 237 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 SCRT1Q9BWW7 348 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 PAPPA-AS1Q5QFB9 102 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 TMEM190Q8WZ59 177 aa12.86□□□□□ -0.35
HDAC5-202ENST00000336057 LEPP41159 167 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 EXOC3-AS1Q8N2X6 119 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 BEND2Q8NDZ0 799 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 CEACAM4O75871 244 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 ZNF726P1Q15940 193 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 MLANAQ16655 118 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 SPACA3Q8IXA5 215 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 RNF5Q99942 180 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 GZMBP10144 247 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 CRIM1Q9NZV1 1036 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 CADP27708 2225 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 PPBPP02775 128 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 Q6ZS92 163 aa12.85□□□□□ -0.35
HDAC5-202ENST00000336057 A0A0G2JNJ9 132 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 FAM168AQ92567 244 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 Q9UFV3 132 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 DOCK11Q5JSL3 2073 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 SHANK1Q9Y566 2161 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.84□□□□□ -0.35
HDAC5-202ENST00000336057 NUP35Q8NFH5 326 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 DUX5Q96PT3 197 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 IGHV3OR16-12A0A075B7B8 117 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 Q6ZR03 302 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 SLX1AQ9BQ83 275 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 PCNX1Q96RV3 2341 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 TMEM170BQ5T4T1 132 aa12.84□□□□□ -0.35
HDAC5-202ENST00000336057 FAM181BA6NEQ2 426 aa12.83□□□□□ -0.35
HDAC5-202ENST00000336057 IGHV3-11P01762 117 aa12.83□□□□□ -0.35
HDAC5-202ENST00000336057 AMMECR1LQ6DCA0 310 aa12.83□□□□□ -0.35
HDAC5-202ENST00000336057 ADIPOQQ15848 244 aa12.83□□□□□ -0.36
HDAC5-202ENST00000336057 CENPVQ7Z7K6 275 aaPredicted RBP12.83□□□□□ -0.36
HDAC5-202ENST00000336057 ZNF664Q8N3J9 261 aa12.83□□□□□ -0.36
HDAC5-202ENST00000336057 FAM71F2Q6NXP2 309 aa12.83□□□□□ -0.36
HDAC5-202ENST00000336057 C7orf69Q9H7B7 122 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms