RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 IGHV4OR15-8A0A075B7B6 117 aa16.53■□□□□ 0.24
TPM1-204ENST00000334895 A0A087WW49 117 aa16.53■□□□□ 0.24
TPM1-204ENST00000334895 A0A1W2PRX2 142 aa16.53■□□□□ 0.24
TPM1-204ENST00000334895 C8orf86Q6ZUL3 223 aa16.53■□□□□ 0.24
TPM1-204ENST00000334895 ZNF709Q8N972 641 aa16.53■□□□□ 0.24
TPM1-204ENST00000334895 TMED6Q8WW62 240 aa16.53■□□□□ 0.24
TPM1-204ENST00000334895 C17orf112F2Z3M2 114 aa16.52■□□□□ 0.24
TPM1-204ENST00000334895 SCGB2A1O75556 95 aa16.52■□□□□ 0.24
TPM1-204ENST00000334895 YIF1AO95070 293 aa16.52■□□□□ 0.24
TPM1-204ENST00000334895 OR2C1O95371 312 aa16.52■□□□□ 0.24
TPM1-204ENST00000334895 RD3LP0DJH9 198 aa16.52■□□□□ 0.24
TPM1-204ENST00000334895 SELENOTP62341 195 aa16.52■□□□□ 0.24
TPM1-204ENST00000334895 ZNF616Q08AN1 781 aa16.52■□□□□ 0.24
TPM1-204ENST00000334895 NUDT19A8MXV4 375 aa16.52■□□□□ 0.23
TPM1-204ENST00000334895 SEC11BP0C7V7 166 aa16.52■□□□□ 0.23
TPM1-204ENST00000334895 B2MP61769 119 aa16.52■□□□□ 0.23
TPM1-204ENST00000334895 C12orf54Q6X4T0 127 aa16.52■□□□□ 0.23
TPM1-204ENST00000334895 ZNF600Q6ZNG1 722 aa16.52■□□□□ 0.23
TPM1-204ENST00000334895 OR2G3Q8NGZ4 309 aa16.52■□□□□ 0.23
TPM1-204ENST00000334895 SLC39A9Q9NUM3 307 aa16.52■□□□□ 0.23
TPM1-204ENST00000334895 GGCTO75223 188 aaKnown RBP16.51■□□□□ 0.23
TPM1-204ENST00000334895 HSPB1P04792 205 aaKnown RBP16.51■□□□□ 0.23
TPM1-204ENST00000334895 GCSAMLQ5JQS6 135 aa16.51■□□□□ 0.23
TPM1-204ENST00000334895 CITED1Q99966 193 aa16.51■□□□□ 0.23
TPM1-204ENST00000334895 VSIRQ9H7M9 311 aa16.51■□□□□ 0.23
TPM1-204ENST00000334895 ZFAND3Q9H8U3 227 aa16.51■□□□□ 0.23
TPM1-204ENST00000334895 PUS1Q9Y606 427 aaKnown RBP eCLIP16.51■□□□□ 0.23
TPM1-204ENST00000334895 TSPAN15O95858 294 aa16.5■□□□□ 0.23
TPM1-204ENST00000334895 ELLP55199 621 aaPredicted RBP16.5■□□□□ 0.23
TPM1-204ENST00000334895 IFITM2Q01629 132 aa16.5■□□□□ 0.23
TPM1-204ENST00000334895 FFAR4Q5NUL3 377 aa16.5■□□□□ 0.23
TPM1-204ENST00000334895 ALKAL2Q6UX46 152 aa16.5■□□□□ 0.23
TPM1-204ENST00000334895 OR51G1Q8NGK1 321 aa16.5■□□□□ 0.23
TPM1-204ENST00000334895 RCC1LQ96I51 464 aaKnown RBP16.5■□□□□ 0.23
TPM1-204ENST00000334895 DUX3Q96PT4 197 aa16.5■□□□□ 0.23
TPM1-204ENST00000334895 WI2-2373I1.2A0A1W2PRP0 233 aa16.49■□□□□ 0.23
TPM1-204ENST00000334895 FABP1P07148 127 aa16.49■□□□□ 0.23
TPM1-204ENST00000334895 TEX261Q6UWH6 196 aa16.49■□□□□ 0.23
TPM1-204ENST00000334895 TOMM20LQ6UXN7 152 aa16.49■□□□□ 0.23
TPM1-204ENST00000334895 OR11H1Q8NG94 326 aa16.49■□□□□ 0.23
TPM1-204ENST00000334895 Q8WTZ3 238 aa16.49■□□□□ 0.23
TPM1-204ENST00000334895 RAX2Q96IS3 184 aa16.49■□□□□ 0.23
TPM1-204ENST00000334895 KCNIP2Q9NS61 270 aa16.49■□□□□ 0.23
TPM1-204ENST00000334895 IGHV3OR16-8A0A075B7F1 116 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 IL4P05112 153 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 SERF2P84101 59 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 RELQ04864 619 aaPredicted RBP16.48■□□□□ 0.23
TPM1-204ENST00000334895 UNQ9165/PRO28630Q6UXU0 137 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 NDUFA11Q86Y39 141 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 PHYHIPLQ96FC7 376 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 HOXD3P31249 432 aaPredicted RBP16.48■□□□□ 0.23
TPM1-204ENST00000334895 PLP1P60201 277 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 RAB2AP61019 212 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 USF2Q15853 346 aaPredicted RBP16.48■□□□□ 0.23
TPM1-204ENST00000334895 NSUN5P1Q3KNT7 163 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 FAM74A1Q5RGS3 127 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 PATE2Q6UY27 113 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 OR1N2Q8NGR9 330 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 SPATA3Q8NHX4 192 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 RNF125Q96EQ8 232 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 DOK5Q9P104 306 aa16.48■□□□□ 0.23
TPM1-204ENST00000334895 LINC01619G3V211 115 aa16.47■□□□□ 0.23
TPM1-204ENST00000334895 NDUFA4O00483 81 aa16.47■□□□□ 0.23
TPM1-204ENST00000334895 LYZP61626 148 aa16.47■□□□□ 0.23
TPM1-204ENST00000334895 FHL3Q13643 280 aa16.47■□□□□ 0.23
TPM1-204ENST00000334895 TMEM37Q8WXS4 190 aa16.47■□□□□ 0.23
TPM1-204ENST00000334895 ORM2P19652 201 aa16.46■□□□□ 0.23
TPM1-204ENST00000334895 RPEL1Q2QD12 228 aa16.46■□□□□ 0.23
TPM1-204ENST00000334895 Q6ZRG5 221 aa16.46■□□□□ 0.23
TPM1-204ENST00000334895 GPHB5Q86YW7 130 aa16.46■□□□□ 0.23
TPM1-204ENST00000334895 C3orf56Q8N813 242 aa16.46■□□□□ 0.23
TPM1-204ENST00000334895 ZNF680Q8NEM1 530 aa16.46■□□□□ 0.23
TPM1-204ENST00000334895 SLURP1P55000 103 aa16.45■□□□□ 0.22
TPM1-204ENST00000334895 EIF5AL1Q6IS14 154 aaKnown RBP16.45■□□□□ 0.22
TPM1-204ENST00000334895 OR1B1Q8NGR6 318 aa16.45■□□□□ 0.22
TPM1-204ENST00000334895 TMEM190Q8WZ59 177 aa16.45■□□□□ 0.22
TPM1-204ENST00000334895 PBDC1Q9BVG4 233 aa16.45■□□□□ 0.22
TPM1-204ENST00000334895 RPRMQ9NS64 109 aa16.45■□□□□ 0.22
TPM1-204ENST00000334895 CCL24O00175 119 aa16.45■□□□□ 0.22
TPM1-204ENST00000334895 DPF1Q92782 380 aa16.45■□□□□ 0.22
TPM1-204ENST00000334895 MRPL27Q9P0M9 148 aaKnown RBP16.45■□□□□ 0.22
TPM1-204ENST00000334895 M6PRP20645 277 aa16.44■□□□□ 0.22
TPM1-204ENST00000334895 ZP3P21754 424 aa16.44■□□□□ 0.22
TPM1-204ENST00000334895 FHITP49789 147 aa16.44■□□□□ 0.22
TPM1-204ENST00000334895 ACOT6Q3I5F7 207 aaPredicted RBP16.44■□□□□ 0.22
TPM1-204ENST00000334895 TMEM41BQ5BJD5 291 aa16.44■□□□□ 0.22
TPM1-204ENST00000334895 RPP25LQ8N5L8 163 aaKnown RBP16.44■□□□□ 0.22
TPM1-204ENST00000334895 UHRF2Q96PU4 802 aa16.44■□□□□ 0.22
TPM1-204ENST00000334895 ZNF747Q9BV97 191 aa16.44■□□□□ 0.22
TPM1-204ENST00000334895 HYPMO75409 117 aa16.43■□□□□ 0.22
TPM1-204ENST00000334895 SULT1A2P50226 295 aa16.43■□□□□ 0.22
TPM1-204ENST00000334895 KLF5Q13887 457 aaPredicted RBP16.43■□□□□ 0.22
TPM1-204ENST00000334895 AKR1C8PQ5T2L2 129 aa16.43■□□□□ 0.22
TPM1-204ENST00000334895 PXDC1Q5TGL8 231 aa16.43■□□□□ 0.22
TPM1-204ENST00000334895 OR10G4Q8NGN3 311 aa16.43■□□□□ 0.22
TPM1-204ENST00000334895 OR10G9Q8NGN4 311 aa16.43■□□□□ 0.22
TPM1-204ENST00000334895 OR10G7Q8NGN6 311 aa16.43■□□□□ 0.22
TPM1-204ENST00000334895 C20orf24Q9BUV8 137 aa16.43■□□□□ 0.22
TPM1-204ENST00000334895 DNAJC4Q9NNZ3 241 aa16.43■□□□□ 0.22
TPM1-204ENST00000334895 UMAD1C9J7I0 102 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms