RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 C17orf100A8MU93 164 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 LGALS1P09382 135 aaKnown RBP11.68□□□□□ -0.54
FNDC1-202ENST00000329629 C8orf46Q8TAG6 207 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 WBP1Q96G27 269 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 LAMTOR3Q9UHA4 124 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 TMEM238C9JI98 176 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 NTN3O00634 580 aaPredicted RBP11.68□□□□□ -0.54
FNDC1-202ENST00000329629 TRGV11A0A075B6L2 103 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 IGKV1-9A0A0C4DH69 117 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 F2Z2F3 143 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 PRCDQ00LT1 54 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 SIGLEC15Q6ZMC9 328 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 MRPS18CQ9Y3D5 142 aaKnown RBP11.68□□□□□ -0.54
FNDC1-202ENST00000329629 TRIOBPQ9H2D6 2365 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 CD5P06127 495 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 MORN3Q6PF18 240 aaPredicted RBP11.68□□□□□ -0.54
FNDC1-202ENST00000329629 OR9G4Q8NGQ1 327 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 MYOD1P15172 320 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 C1orf194Q5T5A4 169 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 C2orf82Q6UX34 121 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 SCRT1Q9BWW7 348 aa11.68□□□□□ -0.54
FNDC1-202ENST00000329629 DUSP14O95147 198 aaKnown RBP11.67□□□□□ -0.54
FNDC1-202ENST00000329629 TCRAP04437 139 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 GLRX5Q86SX6 157 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 NDUFS6O75380 124 aaKnown RBP11.67□□□□□ -0.54
FNDC1-202ENST00000329629 LINC00271P0C7V0 271 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 PSG1P11464 419 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 ZNF625Q96I27 306 aaPredicted RBP11.67□□□□□ -0.54
FNDC1-202ENST00000329629 VGLL1Q99990 258 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 MAP1BP46821 2468 aaKnown RBP11.67□□□□□ -0.54
FNDC1-202ENST00000329629 LCN12Q6JVE5 192 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 ZNF474Q6S9Z5 364 aaPredicted RBP11.67□□□□□ -0.54
FNDC1-202ENST00000329629 TMEM256Q8N2U0 113 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 TMEM133Q9H2Q1 129 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 IGLV3-12A0A075B6K2 115 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 ACTL10Q5JWF8 245 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 JPT2Q9H910 190 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 ZNF319Q9P2F9 582 aa11.67□□□□□ -0.54
FNDC1-202ENST00000329629 PAX4O43316 350 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 RPL15P61313 204 aaKnown RBP11.66□□□□□ -0.54
FNDC1-202ENST00000329629 ZCCHC24Q8N2G6 241 aaKnown RBP11.66□□□□□ -0.54
FNDC1-202ENST00000329629 GFI1Q99684 422 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 ID3Q02535 119 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 UNQ6494/PRO21346Q6UXR6 183 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 SMPXQ9UHP9 88 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 LINC00527Q9UJ94 153 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 RFNGQ9Y644 331 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.66□□□□□ -0.54
FNDC1-202ENST00000329629 CFHR1Q03591 330 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 LYZL1Q6UWQ5 148 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 TREML4Q6UXN2 200 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 PTPRFP10586 1907 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 SCN5AQ14524 2016 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 LOC102723996A0A087X1L8 192 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 LYNX1G3V0Z9 82 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 LYNX1P0DP58 116 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 HGFACQ04756 655 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 NRN1LQ496H8 165 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 TMEM242Q9NWH2 141 aa11.66□□□□□ -0.54
FNDC1-202ENST00000329629 DUTP33316 252 aaKnown RBP11.66□□□□□ -0.54
FNDC1-202ENST00000329629 PAQR4Q8N4S7 273 aaPredicted RBP11.66□□□□□ -0.54
FNDC1-202ENST00000329629 MPV17L2Q567V2 206 aa11.65□□□□□ -0.54
FNDC1-202ENST00000329629 LCNL1Q6ZST4 164 aa11.65□□□□□ -0.54
FNDC1-202ENST00000329629 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.54
FNDC1-202ENST00000329629 FAM90A2PQ658T7 463 aa11.65□□□□□ -0.54
FNDC1-202ENST00000329629 MCRIP2Q9BUT9 160 aaKnown RBP11.65□□□□□ -0.54
FNDC1-202ENST00000329629 TRBV24-1A0A075B6N3 115 aa11.65□□□□□ -0.54
FNDC1-202ENST00000329629 PMS2P5A8MQ11 134 aa11.65□□□□□ -0.54
FNDC1-202ENST00000329629 TIMM23O14925 209 aa11.65□□□□□ -0.55
FNDC1-202ENST00000329629 MPZP25189 248 aa11.65□□□□□ -0.55
FNDC1-202ENST00000329629 C11orf44Q8N8P7 122 aa11.65□□□□□ -0.55
FNDC1-202ENST00000329629 BMPERQ8N8U9 685 aa11.65□□□□□ -0.55
FNDC1-202ENST00000329629 CYTL1Q9NRR1 136 aa11.65□□□□□ -0.55
FNDC1-202ENST00000329629 WDR83OSQ9Y284 106 aa11.65□□□□□ -0.55
FNDC1-202ENST00000329629 SCN2AQ99250 2005 aa11.64□□□□□ -0.55
FNDC1-202ENST00000329629 PAX8Q06710 450 aa11.64□□□□□ -0.55
FNDC1-202ENST00000329629 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
FNDC1-202ENST00000329629 ITGB1BP1O14713 200 aa11.64□□□□□ -0.55
FNDC1-202ENST00000329629 DLX4Q92988 240 aaPredicted RBP11.64□□□□□ -0.55
FNDC1-202ENST00000329629 GGTLC1Q9BX51 225 aa11.64□□□□□ -0.55
FNDC1-202ENST00000329629 E9PLN8 166 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 OVOL1O14753 267 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 CDK2AP2O75956 126 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 ZNF876PQ49A33 203 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 MLNRO43193 412 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 NSUN5P1Q3KNT7 163 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 MGST2Q99735 147 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 C3orf79P0CE67 100 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 GAGE2AQ6NT46 116 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 RCHY1Q96PM5 261 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 MTCL1Q9Y4B5 1905 aaKnown RBP11.63□□□□□ -0.55
FNDC1-202ENST00000329629 GTF3AQ92664 365 aaKnown RBP11.63□□□□□ -0.55
FNDC1-202ENST00000329629 SPINK8P0C7L1 97 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 C10orf55Q5SWW7 151 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 NUP35Q8NFH5 326 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 ANKRD36A6QL64 1941 aa11.63□□□□□ -0.55
FNDC1-202ENST00000329629 KLF17Q5JT82 389 aaPredicted RBP11.62□□□□□ -0.55
FNDC1-202ENST00000329629 CABIN1Q9Y6J0 2220 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 VWC2LB2RUY7 222 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms