RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-201ENST00000328923 OTOGLQ3ZCN5 2332 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 A0A1W2PQM1 296 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-201ENST00000328923 ZFAND5O76080 213 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 DKK1O94907 266 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 IGLV2-14P01704 120 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 RBP4P02753 201 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 NDUFV3P56181 108 aaKnown RBP9.66□□□□□ -0.86
SHMT2-201ENST00000328923 C1orf210Q8IVY1 113 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 TUSC5Q8IXB3 177 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 ZADH2Q8N4Q0 377 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 PTH2Q96A98 100 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 VCX2Q9H322 139 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 TRAV5A0A0B4J249 113 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 HIGD1CA8MV81 97 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 A8MWL6 223 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 CSN3P07498 182 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 ZNF747Q9BV97 191 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 TRAV25A0A0B4J276 109 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 C5orf49A4QMS7 147 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 DNPH1O43598 174 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 ZNF32P17041 273 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 PCBD1P61457 104 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 ZNF766Q5HY98 468 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 SPATA46Q5T0L3 261 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 SSMEM1Q8WWF3 244 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 SNRNP40Q96DI7 357 aaKnown RBP9.65□□□□□ -0.86
SHMT2-201ENST00000328923 IGF2BP2-AS1Q96M15 143 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 DUSP13Q9UII6 198 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 HCFC1P51610 2035 aa9.65□□□□□ -0.86
SHMT2-201ENST00000328923 ASCC3Q8N3C0 2202 aaKnown RBP9.65□□□□□ -0.87
SHMT2-201ENST00000328923 HEATR1Q9H583 2144 aaKnown RBP9.65□□□□□ -0.87
SHMT2-201ENST00000328923 AREGP15514 252 aa9.64□□□□□ -0.87
SHMT2-201ENST00000328923 ZNF837Q96EG3 531 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-201ENST00000328923 MGST2Q99735 147 aa9.64□□□□□ -0.87
SHMT2-201ENST00000328923 OR2H1Q9GZK4 316 aa9.64□□□□□ -0.87
SHMT2-201ENST00000328923 PRDM14Q9GZV8 571 aa9.64□□□□□ -0.87
SHMT2-201ENST00000328923 IGHV5-10-1A0A0J9YXX1 117 aa9.64□□□□□ -0.87
SHMT2-201ENST00000328923 MKXQ8IYA7 352 aa9.64□□□□□ -0.87
SHMT2-201ENST00000328923 GPR179Q6PRD1 2367 aa9.64□□□□□ -0.87
SHMT2-201ENST00000328923 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-201ENST00000328923 A0A1B0GXF2 115 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 PRRG2O14669 202 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 MGST3O14880 152 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 SLC25A5P05141 298 aaKnown RBP9.63□□□□□ -0.87
SHMT2-201ENST00000328923 CFIP05156 583 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-201ENST00000328923 FAM159AQ6UWV7 190 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 C20orf204Q6ZNR8 217 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 FAM214BQ7L5A3 538 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 MOGAT3Q86VF5 341 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 OR8A1Q8NGG7 326 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 C8orf46Q8TAG6 207 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 AJUBAQ96IF1 538 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 UCN2Q96RP3 112 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 MED12Q93074 2177 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 FNDC10F2Z333 226 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 ZNF137PP52743 207 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 LCNL1Q6ZST4 164 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 C3orf56Q8N813 242 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 FAM169BQ8N8A8 192 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 OR5AN1Q8NGI8 311 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 PPP1R35Q8TAP8 253 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 HS3ST6Q96QI5 342 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 CHCHD2Q9Y6H1 151 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-201ENST00000328923 SPTBN2O15020 2390 aa9.63□□□□□ -0.87
SHMT2-201ENST00000328923 IGHV3-15A0A0B4J1V0 119 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 CENPVL3A0A0U1RRI6 287 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 TCRBV4S1A1TA0A5B7 111 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 C15orf62A8K5M9 175 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 SCRG1O75711 98 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 LTAP01374 205 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 CSN1S1P47710 185 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 DSCR4P56555 118 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-201ENST00000328923 EFNB3Q15768 340 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 MBNL2Q5VZF2 373 aaKnown RBP9.62□□□□□ -0.87
SHMT2-201ENST00000328923 TREML4Q6UXN2 200 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 ZBTB34Q8NCN2 500 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 NRGNQ92686 78 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 DAZAP1Q96EP5 407 aaKnown RBP9.62□□□□□ -0.87
SHMT2-201ENST00000328923 LINC00479Q96M42 142 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 TTTY13Q9BZ97 58 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 TMEM133Q9H2Q1 129 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 FRYQ5TBA9 3013 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 RHODO00212 210 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 CEACAM4O75871 244 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 P0C879 139 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 PEAR1Q5VY43 1037 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-201ENST00000328923 NCOR2Q9Y618 2525 aa9.62□□□□□ -0.87
SHMT2-201ENST00000328923 PATE3B3GLJ2 98 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 GGTLC3B5MD39 225 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 HBBP68871 147 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 ATP6V0E2Q8NHE4 81 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 CARD19Q96LW7 228 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 FAM90A9PA6NNJ1 464 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 NPIPB6E9PJ23 425 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 ACTL6BO94805 426 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 B4GALT1P15291 398 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 SRD5A1P18405 259 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms