RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 PUS1Q9Y606 427 aaKnown RBP eCLIP11.77□□□□□ -0.53
PRPF3-201ENST00000324862 A0A1B0GV50 99 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 TMEM89A2RUT3 159 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 C17orf112F2Z3M2 114 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 TEX46H3BTG2 121 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 BMPR1BO00238 502 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 FCGR2BP31994 310 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-201ENST00000324862 RPL29P47914 159 aaKnown RBP11.76□□□□□ -0.53
PRPF3-201ENST00000324862 SPATA31B1PQ5VZV4 182 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 RPP25LQ8N5L8 163 aaKnown RBP11.76□□□□□ -0.53
PRPF3-201ENST00000324862 TSPAN15O95858 294 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 LYZP61626 148 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 MORN5Q5VZ52 161 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 UNQ9165/PRO28630Q6UXU0 137 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 PATE2Q6UY27 113 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 OR1B1Q8NGR6 318 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 UBE2E2Q96LR5 201 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 TXN2Q99757 166 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 SEPSECSQ9HD40 501 aaKnown RBP11.76□□□□□ -0.53
PRPF3-201ENST00000324862 TIMM9Q9Y5J7 89 aa11.76□□□□□ -0.53
PRPF3-201ENST00000324862 IGHV4OR15-8A0A075B7B6 117 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 A0A087WW49 117 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 ZNF207O43670 478 aaKnown RBP11.75□□□□□ -0.53
PRPF3-201ENST00000324862 IL4P05112 153 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 USF2Q15853 346 aaPredicted RBP11.75□□□□□ -0.53
PRPF3-201ENST00000324862 ZNF726P1Q15940 193 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 OR51G1Q8NGK1 321 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 PHYHIPLQ96FC7 376 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 UBQLN2Q9UHD9 624 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 I3L521 148 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 IFNA7P01567 189 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 AKR1C8PQ5T2L2 129 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 KLHL30-AS1Q8NEE0 82 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 FAM213BQ8TBF2 198 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 SLC25A22Q9H936 323 aa11.75□□□□□ -0.53
PRPF3-201ENST00000324862 PEF1Q9UBV8 284 aaKnown RBP11.75□□□□□ -0.53
PRPF3-201ENST00000324862 TOMM40O96008 361 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 LGALS1P09382 135 aaKnown RBP11.74□□□□□ -0.53
PRPF3-201ENST00000324862 EDN2P20800 178 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 FAM122CQ6P4D5 195 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 TOMM20LQ6UXN7 152 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 OR10G4Q8NGN3 311 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 OR10G9Q8NGN4 311 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 OR10G7Q8NGN6 311 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 SELENOKQ9Y6D0 94 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 WNK1Q9H4A3 2382 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 TRAV30A0A087WSZ9 112 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 OR5G3P0C626 314 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 SULT1A2P50226 295 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 SERF2P84101 59 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 LEMD1Q68G75 181 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 COMMD1Q8N668 190 aa11.74□□□□□ -0.53
PRPF3-201ENST00000324862 IGHV3OR16-13A0A075B7E8 117 aa11.73□□□□□ -0.53
PRPF3-201ENST00000324862 IGHV3-49A0A0A0MS15 119 aa11.73□□□□□ -0.53
PRPF3-201ENST00000324862 IGHV3-74A0A0B4J1X5 117 aa11.73□□□□□ -0.53
PRPF3-201ENST00000324862 ZNF705EA8MWA4 302 aaPredicted RBP11.73□□□□□ -0.53
PRPF3-201ENST00000324862 SNRPCP09234 159 aaKnown RBP11.73□□□□□ -0.53
PRPF3-201ENST00000324862 CDX1P47902 265 aaPredicted RBP11.73□□□□□ -0.53
PRPF3-201ENST00000324862 YPEL3P61236 119 aaPredicted RBP11.73□□□□□ -0.53
PRPF3-201ENST00000324862 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
PRPF3-201ENST00000324862 Q6ZRG5 221 aa11.73□□□□□ -0.53
PRPF3-201ENST00000324862 VWFP04275 2813 aa11.73□□□□□ -0.53
PRPF3-201ENST00000324862 TRAV5A0A0B4J249 113 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 NUDT19A8MXV4 375 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 M6PRP20645 277 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 AWAT1Q58HT5 328 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 TMEM41BQ5BJD5 291 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 OR11H1Q8NG94 326 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 C20orf24Q9BUV8 137 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 ZFAND3Q9H8U3 227 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 RGS13O14921 159 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 NMBP08949 121 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 FGF8P55075 233 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-201ENST00000324862 SELENOTP62341 195 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 FAM78BQ5VT40 261 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 MIR17HGQ75NE6 70 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 Q8WTZ3 238 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 WFDC12Q8WWY7 111 aa11.72□□□□□ -0.53
PRPF3-201ENST00000324862 SLURP1P55000 103 aa11.71□□□□□ -0.53
PRPF3-201ENST00000324862 NSUN5P1Q3KNT7 163 aa11.71□□□□□ -0.53
PRPF3-201ENST00000324862 LCN15Q6UWW0 184 aa11.71□□□□□ -0.53
PRPF3-201ENST00000324862 ZNF600Q6ZNG1 722 aa11.71□□□□□ -0.53
PRPF3-201ENST00000324862 RNF141Q8WVD5 230 aa11.71□□□□□ -0.53
PRPF3-201ENST00000324862 COL6A5A8TX70 2615 aa11.71□□□□□ -0.53
PRPF3-201ENST00000324862 IGHV3-66A0A0C4DH42 116 aa11.71□□□□□ -0.54
PRPF3-201ENST00000324862 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.54
PRPF3-201ENST00000324862 ZNF320A2RRD8 509 aa11.71□□□□□ -0.54
PRPF3-201ENST00000324862 ADARB2-AS1A8MUL3 147 aa11.71□□□□□ -0.54
PRPF3-201ENST00000324862 APOHP02749 345 aaPredicted RBP11.71□□□□□ -0.54
PRPF3-201ENST00000324862 ZNF767PQ75MW2 155 aa11.71□□□□□ -0.54
PRPF3-201ENST00000324862 COX7A2P2O60397 106 aa11.7□□□□□ -0.54
PRPF3-201ENST00000324862 ACOT6Q3I5F7 207 aaPredicted RBP11.7□□□□□ -0.54
PRPF3-201ENST00000324862 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
PRPF3-201ENST00000324862 LINC00305Q7Z4B0 112 aa11.7□□□□□ -0.54
PRPF3-201ENST00000324862 C4orf3Q8WVX3 66 aa11.7□□□□□ -0.54
PRPF3-201ENST00000324862 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
PRPF3-201ENST00000324862 C19orf24Q9BVV8 132 aa11.7□□□□□ -0.54
PRPF3-201ENST00000324862 DNAJC4Q9NNZ3 241 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms