RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 FRMD6-AS1P0C7T7 363 aa12.55□□□□□ -0.4
VARS2-201ENST00000321897 ZC2HC1AQ96GY0 325 aa12.55□□□□□ -0.4
VARS2-201ENST00000321897 SCGB1C2P0DMR2 95 aa12.55□□□□□ -0.4
VARS2-201ENST00000321897 PNKDQ8N490 385 aa12.55□□□□□ -0.4
VARS2-201ENST00000321897 MGAQ8IWI9 3026 aa12.55□□□□□ -0.4
VARS2-201ENST00000321897 KHDC1LQ5JSQ8 128 aa12.55□□□□□ -0.4
VARS2-201ENST00000321897 ZNF474Q6S9Z5 364 aaPredicted RBP12.55□□□□□ -0.4
VARS2-201ENST00000321897 SPCS1Q9Y6A9 102 aa12.55□□□□□ -0.4
VARS2-201ENST00000321897 STAG3L2P0CL84 134 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 STAG3L3P0CL85 134 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 HBBP68871 147 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 UFC1Q9Y3C8 167 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 FOXI3A8MTJ6 420 aaPredicted RBP12.54□□□□□ -0.4
VARS2-201ENST00000321897 TDGF1P13385 188 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 PRR30Q53SZ7 412 aaPredicted RBP12.54□□□□□ -0.4
VARS2-201ENST00000321897 WDR31Q8NA23 367 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 IGFBPL1Q8WX77 278 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 SCNM1Q9BWG6 230 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 GNB1LQ9BYB4 327 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 IGHV1-46P01743 117 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 APOHP02749 345 aaPredicted RBP12.54□□□□□ -0.4
VARS2-201ENST00000321897 GPR183P32249 361 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 GOLT1AQ6ZVE7 132 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 TSKUQ8WUA8 353 aa12.54□□□□□ -0.4
VARS2-201ENST00000321897 GAGE12BA1L429 117 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 RIGQ13278 110 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 TMEM97Q5BJF2 176 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 Q6ZPA2 131 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 OR4F17Q8NGA8 305 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 NAV3Q8IVL0 2385 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 KIR2DL5BA0A0G2JN68 375 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 KIR2DL5BA0A0G2JPC4 375 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 SPRNQ5BIV9 151 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 KIR2DL5AQ8N109 375 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 SSC4DQ8WTU2 575 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 ORAOV1Q8WV07 137 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 MGST2Q99735 147 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 CST9LQ9H4G1 147 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 H3BVH4 76 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 ORM1P02763 201 aa12.53□□□□□ -0.4
VARS2-201ENST00000321897 IGHV3-66A0A0C4DH42 116 aa12.52□□□□□ -0.4
VARS2-201ENST00000321897 IZUMO1RA6ND01 250 aa12.52□□□□□ -0.4
VARS2-201ENST00000321897 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.4
VARS2-201ENST00000321897 SRRM5B3KS81 715 aa12.52□□□□□ -0.4
VARS2-201ENST00000321897 K7EM74 188 aa12.52□□□□□ -0.4
VARS2-201ENST00000321897 NUDT10Q8NFP7 164 aa12.52□□□□□ -0.4
VARS2-201ENST00000321897 LINC00305Q7Z4B0 112 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 RAB1CQ92928 201 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 GTSF1LQ9H1H1 148 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 NBEAQ8NFP9 2946 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 MAP1AP78559 2803 aaPredicted RBP12.52□□□□□ -0.41
VARS2-201ENST00000321897 PPIAL4CA0A0B4J2A2 164 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 IGHV1-69-2A0A0G2JMI3 117 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 LIPFP07098 398 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 PPIAL4GP0DN37 164 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 NPPCP23582 126 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 FCGR2BP31994 310 aaPredicted RBP12.52□□□□□ -0.41
VARS2-201ENST00000321897 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 PERPQ96FX8 193 aa12.52□□□□□ -0.41
VARS2-201ENST00000321897 HIVEP3Q5T1R4 2406 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 LOC107984156A0A0G2JMH3 177 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 A0A1W2PRE2 83 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 C15orf62A8K5M9 175 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 MMP23AO75900 390 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 ARL17AQ8IVW1 177 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 A1L4Q6 167 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 PEX7O00628 323 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 IGLL1P15814 213 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 SELENOTP62341 195 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 OCIAD2Q56VL3 154 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 AAMDCQ9H7C9 122 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 TRAV8-6A0A0B4J262 113 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 SAMD13Q5VXD3 122 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 CRIP3Q6Q6R5 217 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 SCGB1D4Q6XE38 83 aa12.51□□□□□ -0.41
VARS2-201ENST00000321897 C17orf100A8MU93 164 aa12.5□□□□□ -0.41
VARS2-201ENST00000321897 TYMSP04818 313 aa12.5□□□□□ -0.41
VARS2-201ENST00000321897 OR10AG1Q8NH19 301 aa12.5□□□□□ -0.41
VARS2-201ENST00000321897 KLK15Q9H2R5 256 aa12.5□□□□□ -0.41
VARS2-201ENST00000321897 ARHGAP32A7KAX9 2087 aa12.5□□□□□ -0.41
VARS2-201ENST00000321897 GAGE1Q13065 139 aa12.5□□□□□ -0.41
VARS2-201ENST00000321897 KLF17Q5JT82 389 aaPredicted RBP12.5□□□□□ -0.41
VARS2-201ENST00000321897 COA6Q5JTJ3 125 aaKnown RBP12.5□□□□□ -0.41
VARS2-201ENST00000321897 RAB1BQ9H0U4 201 aa12.5□□□□□ -0.41
VARS2-201ENST00000321897 GP6Q9HCN6 339 aa12.5□□□□□ -0.41
VARS2-201ENST00000321897 SLC25A15Q9Y619 301 aa12.5□□□□□ -0.41
VARS2-201ENST00000321897 REV3LO60673 3130 aa12.5□□□□□ -0.41
VARS2-201ENST00000321897 CKS2P33552 79 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 Q1RN00 199 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 TEX43Q6ZNM6 134 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 RNF138Q8WVD3 245 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 OSTCQ9NRP0 149 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 FRYQ5TBA9 3013 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 TMEM131Q92545 1883 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 ZNF134P52741 427 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 LYPD2Q6UXB3 125 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 OR2K2Q8NGT1 345 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.49□□□□□ -0.41
VARS2-201ENST00000321897 DLL1O00548 723 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 GOSR1O95249 250 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms