RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 MDS2Q8NDY4 140 aa13.52□□□□□ -0.25
SFXN1-201ENST00000321442 ZNF502Q8TBZ5 544 aa13.52□□□□□ -0.25
SFXN1-201ENST00000321442 MRPS18CQ9Y3D5 142 aaKnown RBP13.52□□□□□ -0.25
SFXN1-201ENST00000321442 PRSS8Q16651 343 aa13.52□□□□□ -0.25
SFXN1-201ENST00000321442 KHDC1LQ5JSQ8 128 aa13.52□□□□□ -0.25
SFXN1-201ENST00000321442 NUDT10Q8NFP7 164 aa13.52□□□□□ -0.25
SFXN1-201ENST00000321442 RNASEH2CQ8TDP1 164 aaKnown RBP13.52□□□□□ -0.25
SFXN1-201ENST00000321442 NUDT11Q96G61 164 aa13.52□□□□□ -0.25
SFXN1-201ENST00000321442 FOXI3A8MTJ6 420 aaPredicted RBP13.51□□□□□ -0.25
SFXN1-201ENST00000321442 MGPP08493 103 aa13.51□□□□□ -0.25
SFXN1-201ENST00000321442 ZNF138P52744 262 aa13.51□□□□□ -0.25
SFXN1-201ENST00000321442 RAB1CQ92928 201 aa13.51□□□□□ -0.25
SFXN1-201ENST00000321442 TRAV8-6A0A0B4J262 113 aa13.51□□□□□ -0.25
SFXN1-201ENST00000321442 LOC107984156A0A0G2JMH3 177 aa13.51□□□□□ -0.25
SFXN1-201ENST00000321442 TDGF1P13385 188 aa13.51□□□□□ -0.25
SFXN1-201ENST00000321442 ASPHD1Q5U4P2 390 aa13.51□□□□□ -0.25
SFXN1-201ENST00000321442 DTX1Q86Y01 620 aa13.51□□□□□ -0.25
SFXN1-201ENST00000321442 ARL17AQ8IVW1 177 aa13.51□□□□□ -0.25
SFXN1-201ENST00000321442 CACNG8Q8WXS5 425 aa13.51□□□□□ -0.25
SFXN1-201ENST00000321442 LGALS7P47929 136 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 MPV17L2Q567V2 206 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 ZNF414Q96IQ9 312 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 H3BUT2 72 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 RBPMS2Q6ZRY4 209 aaKnown RBP13.5□□□□□ -0.25
SFXN1-201ENST00000321442 COLCA1Q6ZS62 124 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 TMEM186Q96B77 213 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 Q9H3A6 140 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 TRBV6-6A0A0A6YYG2 114 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 hDV102S1A0JD36 115 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 ZNF503-AS2A6NEH8 195 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 LINC00614P0C842 121 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 DNLZQ5SXM8 178 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 CD177Q8N6Q3 437 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 RAB1BQ9H0U4 201 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 FNDC4Q9H6D8 234 aaPredicted RBP13.5□□□□□ -0.25
SFXN1-201ENST00000321442 FBXL7Q9UJT9 491 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 H3BVH4 76 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 Q6ZWC4 215 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 EPDR1Q9UM22 224 aa13.5□□□□□ -0.25
SFXN1-201ENST00000321442 OR10J3Q5JRS4 329 aa13.49□□□□□ -0.25
SFXN1-201ENST00000321442 POLQO75417 2590 aa13.49□□□□□ -0.25
SFXN1-201ENST00000321442 IGHV3-49A0A0A0MS15 119 aa13.49□□□□□ -0.25
SFXN1-201ENST00000321442 IGLV3-1P01715 115 aa13.49□□□□□ -0.25
SFXN1-201ENST00000321442 DCAF16Q9NXF7 216 aa13.49□□□□□ -0.25
SFXN1-201ENST00000321442 ATP5IP56385 69 aaPredicted RBP13.49□□□□□ -0.25
SFXN1-201ENST00000321442 CX3CL1P78423 397 aa13.49□□□□□ -0.25
SFXN1-201ENST00000321442 RELQ04864 619 aaPredicted RBP13.49□□□□□ -0.25
SFXN1-201ENST00000321442 AMMECR1LQ6DCA0 310 aa13.49□□□□□ -0.25
SFXN1-201ENST00000321442 ARL6IP6Q8N6S5 226 aa13.49□□□□□ -0.25
SFXN1-201ENST00000321442 GP6Q9HCN6 339 aa13.49□□□□□ -0.25
SFXN1-201ENST00000321442 MLNRO43193 412 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 PRELID3AQ96N28 172 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 DYSFO75923 2080 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 IGHV3-23P01764 117 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 AREGP15514 252 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 PRCDQ00LT1 54 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 PET117Q6UWS5 81 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 FAM57AQ8TBR7 257 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 CLEC7AQ9BXN2 247 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 PSMB2P49721 201 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 BPTFQ12830 3046 aa13.48□□□□□ -0.25
SFXN1-201ENST00000321442 HTN1P15515 57 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 GPR183P32249 361 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 ZNF788Q6ZQV5 615 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 HIST1H4GQ99525 98 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 TMEM160Q9NX00 188 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 TRAV8-1A0A0A6YYK1 113 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 C9JCJ5 164 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 LY6HO94772 140 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 TIMM23BQ5SRD1 257 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 MAP1LC3AQ9H492 121 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 MBNL3Q9NUK0 354 aaKnown RBP13.47□□□□□ -0.25
SFXN1-201ENST00000321442 FOXA2Q9Y261 457 aaPredicted RBP13.47□□□□□ -0.25
SFXN1-201ENST00000321442 PLA2G5P39877 138 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 IGHV3OR16-10A0A075B7F0 116 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 BMI1P35226 326 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 KLRB1Q12918 225 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.47□□□□□ -0.25
SFXN1-201ENST00000321442 SSC4DQ8WTU2 575 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 ZNRD1Q9P1U0 126 aa13.47□□□□□ -0.25
SFXN1-201ENST00000321442 SRRM5B3KS81 715 aa13.46□□□□□ -0.25
SFXN1-201ENST00000321442 CD24P25063 80 aa13.46□□□□□ -0.25
SFXN1-201ENST00000321442 TSPOP30536 169 aa13.46□□□□□ -0.25
SFXN1-201ENST00000321442 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.46□□□□□ -0.25
SFXN1-201ENST00000321442 PNKDQ8N490 385 aa13.46□□□□□ -0.25
SFXN1-201ENST00000321442 SH2D7A6NKC9 451 aaPredicted RBP13.46□□□□□ -0.26
SFXN1-201ENST00000321442 GOSR1O95249 250 aa13.46□□□□□ -0.26
SFXN1-201ENST00000321442 FXYD7P58549 80 aa13.46□□□□□ -0.26
SFXN1-201ENST00000321442 TSKUQ8WUA8 353 aa13.46□□□□□ -0.26
SFXN1-201ENST00000321442 A0A1W2PS18 150 aa13.45□□□□□ -0.26
SFXN1-201ENST00000321442 FAM181BA6NEQ2 426 aa13.45□□□□□ -0.26
SFXN1-201ENST00000321442 NUP35Q8NFH5 326 aa13.45□□□□□ -0.26
SFXN1-201ENST00000321442 MEGF9Q9H1U4 602 aa13.45□□□□□ -0.26
SFXN1-201ENST00000321442 A0A087X0K7 114 aa13.45□□□□□ -0.26
SFXN1-201ENST00000321442 PPIAL4CA0A0B4J2A2 164 aa13.45□□□□□ -0.26
SFXN1-201ENST00000321442 F2Z2F3 143 aa13.45□□□□□ -0.26
SFXN1-201ENST00000321442 PPIAL4GP0DN37 164 aa13.45□□□□□ -0.26
SFXN1-201ENST00000321442 C2CD3Q4AC94 2353 aa13.45□□□□□ -0.26
SFXN1-201ENST00000321442 NAV3Q8IVL0 2385 aa13.45□□□□□ -0.26
SFXN1-201ENST00000321442 IGHV1-18A0A0C4DH31 117 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms