RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 OR51G1Q8NGK1 321 aa11.9□□□□□ -0.5
HDDC2-201ENST00000318787 CIB3Q96Q77 187 aaPredicted RBP11.9□□□□□ -0.5
HDDC2-201ENST00000318787 OVOL2Q9BRP0 275 aa11.9□□□□□ -0.5
HDDC2-201ENST00000318787 J3QL48 77 aa11.89□□□□□ -0.51
HDDC2-201ENST00000318787 EIF2B2P49770 351 aaKnown RBP11.89□□□□□ -0.51
HDDC2-201ENST00000318787 OR2F1Q13607 317 aa11.89□□□□□ -0.51
HDDC2-201ENST00000318787 GAMTQ14353 236 aa11.89□□□□□ -0.51
HDDC2-201ENST00000318787 C20orf85Q9H1P6 137 aa11.89□□□□□ -0.51
HDDC2-201ENST00000318787 TRAV6A0A075B6T7 132 aa11.88□□□□□ -0.51
HDDC2-201ENST00000318787 SPRY2O43597 315 aa11.88□□□□□ -0.51
HDDC2-201ENST00000318787 SSSCA1O60232 199 aa11.88□□□□□ -0.51
HDDC2-201ENST00000318787 ZNF688P0C7X2 276 aa11.88□□□□□ -0.51
HDDC2-201ENST00000318787 GPX4P36969 197 aaPredicted RBP11.88□□□□□ -0.51
HDDC2-201ENST00000318787 ATP5IP56385 69 aaPredicted RBP11.88□□□□□ -0.51
HDDC2-201ENST00000318787 LYZP61626 148 aa11.88□□□□□ -0.51
HDDC2-201ENST00000318787 ZNF90Q03938 601 aa11.88□□□□□ -0.51
HDDC2-201ENST00000318787 RNF125Q96EQ8 232 aa11.88□□□□□ -0.51
HDDC2-201ENST00000318787 PLA2G10O15496 165 aa11.87□□□□□ -0.51
HDDC2-201ENST00000318787 NKX2-1P43699 371 aaPredicted RBP11.87□□□□□ -0.51
HDDC2-201ENST00000318787 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
HDDC2-201ENST00000318787 AKR1C1Q04828 323 aa11.87□□□□□ -0.51
HDDC2-201ENST00000318787 PPP1R14BQ96C90 147 aa11.87□□□□□ -0.51
HDDC2-201ENST00000318787 GSKIPQ9P0R6 139 aa11.87□□□□□ -0.51
HDDC2-201ENST00000318787 STRAPQ9Y3F4 350 aaKnown RBP11.87□□□□□ -0.51
HDDC2-201ENST00000318787 KIR2DL5BA0A0G2JN68 375 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 KIR2DL5BA0A0G2JPC4 375 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 SMCO3A2RU48 225 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 HELTA6NFD8 242 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 UBE2CO00762 179 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 FABP1P07148 127 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 C16orf54Q6UWD8 224 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 Q6ZWC4 215 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 STHQ8IWL8 128 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 KIR2DL5AQ8N109 375 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 KIR2DL5BQ8NHK3 375 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 PSENENQ9NZ42 101 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 AGRNO00468 2067 aa11.86□□□□□ -0.51
HDDC2-201ENST00000318787 DYNC2H1Q8NCM8 4307 aaKnown RBP11.85□□□□□ -0.51
HDDC2-201ENST00000318787 A0A0J9YWU9 116 aa11.85□□□□□ -0.51
HDDC2-201ENST00000318787 K7EQG2 157 aa11.85□□□□□ -0.51
HDDC2-201ENST00000318787 CCSO14618 274 aa11.85□□□□□ -0.51
HDDC2-201ENST00000318787 TCRBP04435 133 aa11.85□□□□□ -0.51
HDDC2-201ENST00000318787 IAH1Q2TAA2 248 aaPredicted RBP11.85□□□□□ -0.51
HDDC2-201ENST00000318787 CNPY1Q3B7I2 92 aa11.85□□□□□ -0.51
HDDC2-201ENST00000318787 OR8G2PQ6IF36 304 aa11.85□□□□□ -0.51
HDDC2-201ENST00000318787 SIGLEC15Q6ZMC9 328 aa11.85□□□□□ -0.51
HDDC2-201ENST00000318787 GLMPQ8WWB7 406 aa11.85□□□□□ -0.51
HDDC2-201ENST00000318787 CSTL1Q9H114 145 aa11.85□□□□□ -0.51
HDDC2-201ENST00000318787 NUDT15Q9NV35 164 aa11.85□□□□□ -0.51
HDDC2-201ENST00000318787 IGKV1D-37A0A075B6S9 117 aa11.84□□□□□ -0.51
HDDC2-201ENST00000318787 TRAV2A0A0B4J234 112 aa11.84□□□□□ -0.51
HDDC2-201ENST00000318787 FAM25EA8MYX2 175 aa11.84□□□□□ -0.51
HDDC2-201ENST00000318787 CA1P00915 261 aaPredicted RBP11.84□□□□□ -0.51
HDDC2-201ENST00000318787 AP2S1P53680 142 aaPredicted RBP11.84□□□□□ -0.51
HDDC2-201ENST00000318787 PMS2P11Q13670 270 aa11.84□□□□□ -0.51
HDDC2-201ENST00000318787 PSMG4Q5JS54 123 aa11.84□□□□□ -0.51
HDDC2-201ENST00000318787 IL17DQ8TAD2 202 aa11.84□□□□□ -0.51
HDDC2-201ENST00000318787 SEC22CQ9BRL7 303 aa11.84□□□□□ -0.51
HDDC2-201ENST00000318787 CCDC32Q9BV29 185 aa11.84□□□□□ -0.51
HDDC2-201ENST00000318787 PFDN2Q9UHV9 154 aa11.84□□□□□ -0.51
HDDC2-201ENST00000318787 U3KQE9 123 aa11.84□□□□□ -0.51
HDDC2-201ENST00000318787 KNCNA6PVL3 124 aa11.83□□□□□ -0.52
HDDC2-201ENST00000318787 SNRPGP15A8MWD9 76 aa11.83□□□□□ -0.52
HDDC2-201ENST00000318787 RRAS2P62070 204 aaPredicted RBP11.83□□□□□ -0.52
HDDC2-201ENST00000318787 ACTL10Q5JWF8 245 aa11.83□□□□□ -0.52
HDDC2-201ENST00000318787 ACOT7LQ6ZUV0 252 aa11.83□□□□□ -0.52
HDDC2-201ENST00000318787 OR4D5Q8NGN0 318 aa11.83□□□□□ -0.52
HDDC2-201ENST00000318787 DCANP1Q8TF63 244 aa11.83□□□□□ -0.52
HDDC2-201ENST00000318787 S100ZQ8WXG8 99 aa11.83□□□□□ -0.52
HDDC2-201ENST00000318787 RNF183Q96D59 192 aa11.83□□□□□ -0.52
HDDC2-201ENST00000318787 TP53TG1Q9Y2A0 90 aa11.83□□□□□ -0.52
HDDC2-201ENST00000318787 FAM240BA0A1B0GVZ2 78 aa11.82□□□□□ -0.52
HDDC2-201ENST00000318787 BUB3O43684 328 aa11.82□□□□□ -0.52
HDDC2-201ENST00000318787 NUP62P37198 522 aaPredicted RBP11.82□□□□□ -0.52
HDDC2-201ENST00000318787 ID3Q02535 119 aa11.82□□□□□ -0.52
HDDC2-201ENST00000318787 ZNF846Q147U1 533 aa11.82□□□□□ -0.52
HDDC2-201ENST00000318787 ZBTB8BQ8NAP8 495 aaPredicted RBP11.82□□□□□ -0.52
HDDC2-201ENST00000318787 MITD1Q8WV92 249 aa11.82□□□□□ -0.52
HDDC2-201ENST00000318787 TRGV9Q99603 122 aa11.82□□□□□ -0.52
HDDC2-201ENST00000318787 NRN1Q9NPD7 142 aa11.82□□□□□ -0.52
HDDC2-201ENST00000318787 SACSQ9NZJ4 4579 aa11.82□□□□□ -0.52
HDDC2-201ENST00000318787 IGKV1OR2-108A0A075B7D4 117 aa11.81□□□□□ -0.52
HDDC2-201ENST00000318787 C5orf51A6NDU8 294 aa11.81□□□□□ -0.52
HDDC2-201ENST00000318787 CXorf65A6NEN9 183 aa11.81□□□□□ -0.52
HDDC2-201ENST00000318787 H2AFB2P0C5Z0 115 aa11.81□□□□□ -0.52
HDDC2-201ENST00000318787 METTL15P1P0C7V9 234 aa11.81□□□□□ -0.52
HDDC2-201ENST00000318787 GATA2P23769 480 aaPredicted RBP11.81□□□□□ -0.52
HDDC2-201ENST00000318787 SNRPD3P62318 126 aaKnown RBP11.81□□□□□ -0.52
HDDC2-201ENST00000318787 LINC01559Q495D7 138 aa11.81□□□□□ -0.52
HDDC2-201ENST00000318787 MZT2BQ6NZ67 158 aa11.81□□□□□ -0.52
HDDC2-201ENST00000318787 GSG1LQ6UXU4 331 aa11.81□□□□□ -0.52
HDDC2-201ENST00000318787 SLC25A22Q9H936 323 aa11.81□□□□□ -0.52
HDDC2-201ENST00000318787 TENM2Q9NT68 2774 aa11.81□□□□□ -0.52
HDDC2-201ENST00000318787 PRSS46E5RG02 174 aa11.8□□□□□ -0.52
HDDC2-201ENST00000318787 CCNKO75909 580 aa11.8□□□□□ -0.52
HDDC2-201ENST00000318787 ORM2P19652 201 aa11.8□□□□□ -0.52
HDDC2-201ENST00000318787 THAP8Q8NA92 274 aa11.8□□□□□ -0.52
HDDC2-201ENST00000318787 RARRES2Q99969 163 aa11.8□□□□□ -0.52
HDDC2-201ENST00000318787 LSM5Q9Y4Y9 91 aaKnown RBP11.8□□□□□ -0.52
HDDC2-201ENST00000318787 STARD9Q9P2P6 4700 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms