RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 ZCCHC24Q8N2G6 241 aaKnown RBP7.67□□□□□ -1.18
CAPN3-201ENST00000318023 ZNF331Q9NQX6 463 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-201ENST00000318023 IL36RNQ9UBH0 155 aa7.67□□□□□ -1.18
CAPN3-201ENST00000318023 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.66□□□□□ -1.186e-8■■■■□ 22
CAPN3-201ENST00000318023 ABCA1O95477 2261 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 CAMPP49913 170 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 GNG4P50150 75 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 GRB2P62993 217 aaKnown RBP7.66□□□□□ -1.18
CAPN3-201ENST00000318023 DAZAP2Q15038 168 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-201ENST00000318023 ALKBH6Q3KRA9 238 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 SRSF8Q9BRL6 282 aaKnown RBP7.66□□□□□ -1.18
CAPN3-201ENST00000318023 ANKRD30BLA7E2S9 258 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 RBM11P57052 281 aaKnown RBP7.66□□□□□ -1.18
CAPN3-201ENST00000318023 GDF5OSQ5U4N7 250 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 SLC35E4Q6ICL7 350 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 PET117Q6UWS5 81 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 SH2D6Q7Z4S9 175 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 OR5A1Q8NGJ0 315 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 CACNG8Q8WXS5 425 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 URB1-AS1Q96HZ7 61 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 TMEM191AQ9H0A3 160 aa7.66□□□□□ -1.18
CAPN3-201ENST00000318023 A6NDN8 102 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 VSTM5A8MXK1 200 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 LEPROTL1O95214 131 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 HLA-DRB1P01911 266 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 MFAP2P55001 183 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 FGFBP3Q8TAT2 258 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 FAM168AQ92567 244 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 RNF183Q96D59 192 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 LINC00470Q9BZP3 86 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 SAP30LQ9HAJ7 183 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 PSG8Q9UQ74 426 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 FN1P02751 2386 aaKnown RBP7.65□□□□□ -1.18
CAPN3-201ENST00000318023 M0R135 149 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 TUSC2O75896 110 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 BRI3O95415 125 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 FCGR2BP31994 310 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-201ENST00000318023 FBXL19-AS1Q494R0 122 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 ZNF799Q96GE5 643 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 RABAC1Q9UI14 185 aa7.65□□□□□ -1.18
CAPN3-201ENST00000318023 HIVEP2P31629 2446 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 IGKV3D-15A0A087WSY6 115 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 IGHV1-24A0A0C4DH33 117 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 SMAD7O15105 426 aaKnown RBP7.65□□□□□ -1.19
CAPN3-201ENST00000318023 IGLV3-1P01715 115 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 HBZP02008 142 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 CD3EP07766 207 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 FABP2P12104 132 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 INSL3P51460 131 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 WFDC2Q14508 124 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 RSPO1Q2MKA7 263 aaPredicted RBP7.65□□□□□ -1.19
CAPN3-201ENST00000318023 KCNIP1Q9NZI2 227 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 OR1A1Q9P1Q5 309 aa7.65□□□□□ -1.19
CAPN3-201ENST00000318023 IGHV3-64DA0A0J9YX35 117 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 TSPAN13O95857 204 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 FKBP2P26885 142 aaKnown RBP7.64□□□□□ -1.19
CAPN3-201ENST00000318023 CEBPDP49716 269 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-201ENST00000318023 ZNF585BQ52M93 769 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 TEX45Q8NA69 505 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 HINT2Q9BX68 163 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 FOXH1O75593 365 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 COX8AP10176 69 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 ZNF138P52744 262 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 ETDBQ3ZM63 59 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 IBA57Q5T440 356 aaKnown RBP7.64□□□□□ -1.19
CAPN3-201ENST00000318023 MIC13Q5XKP0 118 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 C20orf204Q6ZNR8 217 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 MDP1Q86V88 176 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 Q8N7P7 452 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 ARPC1AQ92747 370 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 SPATA25Q9BR10 227 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 PLEK2Q9NYT0 353 aa7.64□□□□□ -1.19
CAPN3-201ENST00000318023 PMS2P5A8MQ11 134 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 G6PCP35575 357 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 ODF1Q14990 250 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 ZNF718Q3SXZ3 478 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 SPATA46Q5T0L3 261 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 FGFRL1Q8N441 504 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 WDR31Q8NA23 367 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 OR52E5Q8NH55 327 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 SSMEM1Q8WWF3 244 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 CCL19Q99731 98 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 FOXB1Q99853 325 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 SPAG8Q99932 426 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-201ENST00000318023 MBNL3Q9NUK0 354 aaKnown RBP7.63□□□□□ -1.19
CAPN3-201ENST00000318023 CRXO43186 299 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-201ENST00000318023 WFDC11Q8NEX6 87 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 SPSB4Q96A44 273 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 DUSP13Q9UII6 198 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 ZNF257Q9Y2Q1 563 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 WNK2Q9Y3S1 2297 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 TRBV7-9A0A0J9YWB2 115 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 A0A1W2PRE2 83 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 HELTA6NFD8 242 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 CRYGSP22914 178 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 SAMD5Q5TGI4 173 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 ZNF611Q8N823 705 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 PIGCQ92535 297 aa7.63□□□□□ -1.19
CAPN3-201ENST00000318023 SMR3AQ99954 134 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms