RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 TMEM88Q6PEY1 159 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 BCL6BQ8N143 479 aaPredicted RBP13.11□□□□□ -0.31
CLCF1-201ENST00000312438 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 YTHDF2Q9Y5A9 579 aaKnown RBP13.11□□□□□ -0.31
CLCF1-201ENST00000312438 CELSR2Q9HCU4 2923 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 POLQO75417 2590 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 TRAV41A0A0B4J266 112 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 IGF1P05019 195 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 KIAA0141Q14154 515 aaPredicted RBP13.1□□□□□ -0.31
CLCF1-201ENST00000312438 C9orf152Q5JTZ5 239 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 C9orf139Q6ZV77 190 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 RPUSD4Q96CM3 377 aaKnown RBP13.1□□□□□ -0.31
CLCF1-201ENST00000312438 SMIM7Q9BQ49 75 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 PARLQ9H300 379 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 SDF2L1Q9HCN8 221 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 SMCO4Q9NRQ5 59 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 HIGD1AQ9Y241 93 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 S4R3C0 116 aa13.1□□□□□ -0.31
CLCF1-201ENST00000312438 ANKRD17O75179 2603 aaKnown RBP13.1□□□□□ -0.31
CLCF1-201ENST00000312438 MDFIC2A0A1B0GVS7 189 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 F8W735 103 aaPredicted RBP13.09□□□□□ -0.31
CLCF1-201ENST00000312438 IGHG2P01859 326 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 OR10J4P0C629 311 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 LYZP61626 148 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 TMEM241Q24JQ0 296 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 ZNF674Q2M3X9 581 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 CBLN2Q8IUK8 224 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 WFDC11Q8NEX6 87 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 MRPL27Q9P0M9 148 aaKnown RBP13.09□□□□□ -0.31
CLCF1-201ENST00000312438 NAT8Q9UHE5 227 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 A0A1W2PRE2 83 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 B4DEV8 164 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 NPPCP23582 126 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 RHOGP84095 191 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 C15orf32Q32M92 178 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 Q8WTZ3 238 aa13.09□□□□□ -0.31
CLCF1-201ENST00000312438 AKR1C3P42330 323 aa13.08□□□□□ -0.32
CLCF1-201ENST00000312438 IER3P46695 156 aa13.08□□□□□ -0.32
CLCF1-201ENST00000312438 UBE2L3P68036 154 aaKnown RBP13.08□□□□□ -0.32
CLCF1-201ENST00000312438 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.32
CLCF1-201ENST00000312438 ZNF491Q8N8L2 437 aa13.08□□□□□ -0.32
CLCF1-201ENST00000312438 WI2-2373I1.2A0A1W2PRP0 233 aa13.07□□□□□ -0.32
CLCF1-201ENST00000312438 NDUFB4O95168 129 aa13.07□□□□□ -0.32
CLCF1-201ENST00000312438 BLCAPP62952 87 aa13.07□□□□□ -0.32
CLCF1-201ENST00000312438 OR5R1Q8NH85 324 aa13.07□□□□□ -0.32
CLCF1-201ENST00000312438 TUBA4BQ9H853 241 aa13.07□□□□□ -0.32
CLCF1-201ENST00000312438 GAR1Q9NY12 217 aaKnown RBP13.07□□□□□ -0.32
CLCF1-201ENST00000312438 TENM4Q6N022 2769 aa13.07□□□□□ -0.32
CLCF1-201ENST00000312438 VPS13CQ709C8 3753 aa13.07□□□□□ -0.32
CLCF1-201ENST00000312438 OR2C1O95371 312 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 IGHV3-23P01764 117 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 CTSGP08311 255 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 PYYP10082 97 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 S100A7AQ86SG5 101 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 ZNF502Q8TBZ5 544 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 RNF125Q96EQ8 232 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 FOXC2Q99958 501 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 SLC25A39Q9BZJ4 359 aaPredicted RBP13.06□□□□□ -0.32
CLCF1-201ENST00000312438 CSMD2Q7Z408 3487 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 DOPEY2Q9Y3R5 2298 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 CENPEQ02224 2701 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 A0A087WWC5 75 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 OR2T8A6NH00 312 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 TSPAN4O14817 238 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 IGHV4-59P01825 116 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 IL4P05112 153 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 Q6YL49 198 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 FXYD5Q96DB9 178 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 MS4A10Q96PG2 267 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 TMA7Q9Y2S6 64 aaKnown RBP13.06□□□□□ -0.32
CLCF1-201ENST00000312438 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLCF1-201ENST00000312438 SVEP1Q4LDE5 3571 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 ABCA12Q86UK0 2595 aa13.06□□□□□ -0.32
CLCF1-201ENST00000312438 C11orf52Q96A22 123 aa13.05□□□□□ -0.32
CLCF1-201ENST00000312438 EEF1AKMT3Q96AZ1 226 aa13.05□□□□□ -0.32
CLCF1-201ENST00000312438 LINC00527Q9UJ94 153 aa13.05□□□□□ -0.32
CLCF1-201ENST00000312438 TRBV7-1A0A0A6YYK4 115 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 SCO2A0A1W2PP80 73 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 AP4M1O00189 453 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 BRI3O95415 125 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 CLEC3BP05452 202 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 SUMO1P63165 101 aaKnown RBP13.04□□□□□ -0.32
CLCF1-201ENST00000312438 ATP5G2Q06055 141 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 CIARTQ8N365 385 aaPredicted RBP13.04□□□□□ -0.32
CLCF1-201ENST00000312438 TEX29Q8N6K0 151 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 FAM223BA6NKX1 122 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 H3BUA1 57 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 PPIFP30405 207 aaKnown RBP13.04□□□□□ -0.32
CLCF1-201ENST00000312438 FAM223AQ8IWN6 122 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 ATP6V0BQ99437 205 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 SHANK2-AS3Q9BTD1 123 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 PRDM13Q9H4Q3 707 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 TMEM14CQ9P0S9 112 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
CLCF1-201ENST00000312438 ABCA1O95477 2261 aa13.03□□□□□ -0.32
CLCF1-201ENST00000312438 NBEAP1P0C6P0 100 aa13.03□□□□□ -0.32
CLCF1-201ENST00000312438 RPL23P62829 140 aaKnown RBP13.03□□□□□ -0.32
CLCF1-201ENST00000312438 ZNF343Q6P1L6 599 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms