RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ABCA4P78363 2273 aa20.3■□□□□ 0.84
HOXB3-201ENST00000311626 M0R143 59 aa20.3■□□□□ 0.84
HOXB3-201ENST00000311626 LINC00311Q8N616 119 aa20.3■□□□□ 0.84
HOXB3-201ENST00000311626 NUP35Q8NFH5 326 aa20.3■□□□□ 0.84
HOXB3-201ENST00000311626 TMEM133Q9H2Q1 129 aa20.3■□□□□ 0.84
HOXB3-201ENST00000311626 INS-IGF2F8WCM5 200 aa20.29■□□□□ 0.84
HOXB3-201ENST00000311626 LBHQ53QV2 105 aaPredicted RBP20.29■□□□□ 0.84
HOXB3-201ENST00000311626 VAMP8Q9BV40 100 aa20.29■□□□□ 0.84
HOXB3-201ENST00000311626 IGHV1-69-2A0A0G2JMI3 117 aa20.29■□□□□ 0.84
HOXB3-201ENST00000311626 MT-ND6P03923 174 aa20.29■□□□□ 0.84
HOXB3-201ENST00000311626 Q8N976 141 aa20.29■□□□□ 0.84
HOXB3-201ENST00000311626 DIRC3C9JPN6 131 aa20.28■□□□□ 0.84
HOXB3-201ENST00000311626 CD24P25063 80 aa20.28■□□□□ 0.84
HOXB3-201ENST00000311626 KCNS1Q96KK3 526 aa20.28■□□□□ 0.84
HOXB3-201ENST00000311626 ARHGAP32A7KAX9 2087 aa20.28■□□□□ 0.84
HOXB3-201ENST00000311626 VWC2LB2RUY7 222 aa20.28■□□□□ 0.84
HOXB3-201ENST00000311626 BATFQ16520 125 aa20.28■□□□□ 0.84
HOXB3-201ENST00000311626 TBR1Q16650 682 aa20.28■□□□□ 0.84
HOXB3-201ENST00000311626 LINC00322Q6ZN03 302 aaPredicted RBP20.28■□□□□ 0.84
HOXB3-201ENST00000311626 Q71RC1 249 aaPredicted RBP20.28■□□□□ 0.84
HOXB3-201ENST00000311626 MUC6Q6W4X9 2439 aa20.28■□□□□ 0.84
HOXB3-201ENST00000311626 RPL27AP46776 148 aaKnown RBP20.27■□□□□ 0.84
HOXB3-201ENST00000311626 RPL19P84098 196 aaKnown RBP20.27■□□□□ 0.84
HOXB3-201ENST00000311626 ZNF596Q8TC21 504 aa20.27■□□□□ 0.84
HOXB3-201ENST00000311626 JKAMPQ9P055 326 aa20.27■□□□□ 0.84
HOXB3-201ENST00000311626 NBASA2RRP1 2371 aa20.27■□□□□ 0.84
HOXB3-201ENST00000311626 HLA-DQA1P01909 254 aa20.27■□□□□ 0.84
HOXB3-201ENST00000311626 UBE2G1P62253 170 aa20.27■□□□□ 0.84
HOXB3-201ENST00000311626 TCF24Q7RTU0 167 aa20.27■□□□□ 0.84
HOXB3-201ENST00000311626 MBD6Q96DN6 1003 aa20.27■□□□□ 0.84
HOXB3-201ENST00000311626 ZNF586Q9NXT0 402 aa20.27■□□□□ 0.84
HOXB3-201ENST00000311626 EPDR1Q9UM22 224 aa20.27■□□□□ 0.84
HOXB3-201ENST00000311626 A6NNC1 897 aa20.26■□□□□ 0.83
HOXB3-201ENST00000311626 RAB4AP20338 218 aa20.26■□□□□ 0.83
HOXB3-201ENST00000311626 ATOH7Q8N100 152 aa20.26■□□□□ 0.83
HOXB3-201ENST00000311626 LINC01560Q8TB33 94 aa20.26■□□□□ 0.83
HOXB3-201ENST00000311626 TSKUQ8WUA8 353 aa20.26■□□□□ 0.83
HOXB3-201ENST00000311626 NEU1Q99519 415 aa20.26■□□□□ 0.83
HOXB3-201ENST00000311626 WNT10AQ9GZT5 417 aa20.26■□□□□ 0.83
HOXB3-201ENST00000311626 FBXL15Q9H469 300 aa20.26■□□□□ 0.83
HOXB3-201ENST00000311626 IGHV2-26A0A0B4J1V2 119 aa20.25■□□□□ 0.83
HOXB3-201ENST00000311626 HIGD1CA8MV81 97 aa20.25■□□□□ 0.83
HOXB3-201ENST00000311626 MC5RP33032 325 aa20.25■□□□□ 0.83
HOXB3-201ENST00000311626 OR10J3Q5JRS4 329 aa20.25■□□□□ 0.83
HOXB3-201ENST00000311626 TMEM183BQ1AE95 376 aa20.25■□□□□ 0.83
HOXB3-201ENST00000311626 PERPQ96FX8 193 aa20.25■□□□□ 0.83
HOXB3-201ENST00000311626 ASCL2Q99929 193 aa20.25■□□□□ 0.83
HOXB3-201ENST00000311626 INSIG2Q9Y5U4 225 aa20.25■□□□□ 0.83
HOXB3-201ENST00000311626 NBEAP1P0C6P0 100 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 NIT1Q86X76 327 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 SPACA3Q8IXA5 215 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 C18orf32Q8TCD1 76 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 GRAMD2BQ96HH9 432 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 VSTM5A8MXK1 200 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 ZNF324O75467 553 aaPredicted RBP20.24■□□□□ 0.83
HOXB3-201ENST00000311626 MYCNOSP40205 109 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 ZNF137PP52743 207 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 FAM71F2Q6NXP2 309 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 ASCL5Q7RTU5 278 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 MIEN1Q9BRT3 115 aa20.24■□□□□ 0.83
HOXB3-201ENST00000311626 LY6HO94772 140 aa20.23■□□□□ 0.83
HOXB3-201ENST00000311626 LGALS7P47929 136 aa20.23■□□□□ 0.83
HOXB3-201ENST00000311626 SIGLEC9Q9Y336 463 aa20.23■□□□□ 0.83
HOXB3-201ENST00000311626 C3orf79P0CE67 100 aa20.23■□□□□ 0.83
HOXB3-201ENST00000311626 LCN12Q6JVE5 192 aa20.23■□□□□ 0.83
HOXB3-201ENST00000311626 C20orf144Q9BQM9 153 aa20.23■□□□□ 0.83
HOXB3-201ENST00000311626 ZNF835Q9Y2P0 537 aa20.23■□□□□ 0.83
HOXB3-201ENST00000311626 SPTA1P02549 2419 aa20.23■□□□□ 0.83
HOXB3-201ENST00000311626 GRNP28799 593 aaKnown RBP20.23■□□□□ 0.83
HOXB3-201ENST00000311626 C7orf69Q9H7B7 122 aa20.23■□□□□ 0.83
HOXB3-201ENST00000311626 TRAV8-1A0A0A6YYK1 113 aa20.22■□□□□ 0.83
HOXB3-201ENST00000311626 IGHV1-3A0A0C4DH29 117 aa20.22■□□□□ 0.83
HOXB3-201ENST00000311626 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.22■□□□□ 0.83
HOXB3-201ENST00000311626 HYPMO75409 117 aa20.22■□□□□ 0.83
HOXB3-201ENST00000311626 CRYGCP07315 174 aa20.22■□□□□ 0.83
HOXB3-201ENST00000311626 LYZP61626 148 aa20.22■□□□□ 0.83
HOXB3-201ENST00000311626 KAAG1Q9UBP8 84 aa20.22■□□□□ 0.83
HOXB3-201ENST00000311626 SVEP1Q4LDE5 3571 aa20.22■□□□□ 0.83
HOXB3-201ENST00000311626 MAJINQ3KP22 176 aa20.22■□□□□ 0.83
HOXB3-201ENST00000311626 C8orf31Q8N9H6 132 aa20.22■□□□□ 0.83
HOXB3-201ENST00000311626 OR2D3Q8NGH3 330 aa20.21■□□□□ 0.83
HOXB3-201ENST00000311626 RALYQ9UKM9 306 aaKnown RBP20.21■□□□□ 0.83
HOXB3-201ENST00000311626 TEX45Q8NA69 505 aa20.21■□□□□ 0.83
HOXB3-201ENST00000311626 FAM231DQ6ZW35 169 aa20.2■□□□□ 0.82
HOXB3-201ENST00000311626 S4R3C0 116 aa20.2■□□□□ 0.82
HOXB3-201ENST00000311626 M0QZ24 198 aa20.2■□□□□ 0.82
HOXB3-201ENST00000311626 CRYGBP07316 175 aa20.2■□□□□ 0.82
HOXB3-201ENST00000311626 Q9H3A6 140 aa20.2■□□□□ 0.82
HOXB3-201ENST00000311626 IGLV1-47P01700 117 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 ETFRF1Q6IPR1 90 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 KIR3DL3Q8N743 410 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 TRGV9Q99603 122 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 TEX22C9J3V5 150 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 BUB1B-PAK6H3BSN5 160 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 RBP4P02753 201 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 PSG1P11464 419 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 GP9P14770 177 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 APOBEC3AP31941 199 aaPredicted RBP20.19■□□□□ 0.82
HOXB3-201ENST00000311626 PLGLAQ15195 96 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 COX19Q49B96 90 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms