RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 RNASE7Q9H1E1 156 aaKnown RBP8.75□□□□□ -1.01
MUC4-201ENST00000308466 PROP1O75360 226 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 BRWD1-AS2P59051 145 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 UTF1Q5T230 341 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 IGFL2Q6UWQ7 119 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 OR8B3Q8NGG8 313 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 OR8B2Q96RD0 313 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 RAB1BQ9H0U4 201 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 FBXL15Q9H469 300 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 TNRC6AQ8NDV7 1962 aaKnown RBP8.74□□□□□ -1.01
MUC4-201ENST00000308466 NCOR2Q9Y618 2525 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 IGHV2-70DA0A0C4DH43 119 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 K7EP13 123 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 PPBPP02775 128 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 PYYP10082 97 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 VDAC2P45880 294 aaPredicted RBP8.74□□□□□ -1.01
MUC4-201ENST00000308466 MEF2CQ06413 473 aaPredicted RBP8.74□□□□□ -1.01
MUC4-201ENST00000308466 PRR31Q5SQ13 230 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 YTHDF2Q9Y5A9 579 aaKnown RBP8.74□□□□□ -1.01
MUC4-201ENST00000308466 S4R3C0 116 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 ADAMTS20P59510 1910 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 MUC21A0A0G2JKD1 596 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 MUC21A0A140T8X8 626 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 H3BUT2 72 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 CD24P25063 80 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 APOBEC3AP31941 199 aaPredicted RBP8.74□□□□□ -1.01
MUC4-201ENST00000308466 MUC21Q5SSG8 566 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 SPACA3Q8IXA5 215 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 PNKDQ8N490 385 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 FAM169BQ8N8A8 192 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 PERPQ96FX8 193 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 SIGMAR1Q99720 223 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 CITED1Q99966 193 aa8.74□□□□□ -1.01
MUC4-201ENST00000308466 FOXA2Q9Y261 457 aaPredicted RBP8.74□□□□□ -1.01
MUC4-201ENST00000308466 FAM90A9PA6NNJ1 464 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 CHEK1O14757 476 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 PFN1P07737 140 aaKnown RBP8.73□□□□□ -1.01
MUC4-201ENST00000308466 IGLC2P0DOY2 106 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 IGLC3P0DOY3 106 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 PAX2Q02962 417 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 CD69Q07108 199 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 FBXL7Q9UJT9 491 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 ARL3P36405 182 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 TMEM177Q53S58 311 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 LINC00305Q7Z4B0 112 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 FAM222BQ8WU58 562 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 RASL11BQ9BPW5 248 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 SRSF8Q9BRL6 282 aaKnown RBP8.73□□□□□ -1.01
MUC4-201ENST00000308466 SPTBN4Q9H254 2564 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 SRIP30626 198 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 MAS1LP35410 378 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 LCN2P80188 198 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 ZNF114Q8NC26 417 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 GNB4Q9HAV0 340 aa8.73□□□□□ -1.01
MUC4-201ENST00000308466 PEF1Q9UBV8 284 aaKnown RBP8.73□□□□□ -1.01
MUC4-201ENST00000308466 SRRM4A7MD48 611 aaKnown RBP8.72□□□□□ -1.01
MUC4-201ENST00000308466 TMEM178BH3BS89 294 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 LY6HO94772 140 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 AZU1P20160 251 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 CFHR2P36980 270 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 SLC25A48Q6ZT89 311 aaKnown RBP8.72□□□□□ -1.01
MUC4-201ENST00000308466 EAF1Q96JC9 268 aaPredicted RBP8.72□□□□□ -1.01
MUC4-201ENST00000308466 ANKRD11Q6UB99 2663 aaPredicted RBP8.72□□□□□ -1.01
MUC4-201ENST00000308466 KIAA1549Q9HCM3 1950 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 IGLV3-9A0A075B6K5 115 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 CA1P00915 261 aaPredicted RBP8.72□□□□□ -1.01
MUC4-201ENST00000308466 PSG9Q00887 426 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 SLAQ13239 276 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 ACTL10Q5JWF8 245 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 C22orf34Q6ZV56 151 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 ZNF48Q96MX3 618 aaPredicted RBP8.72□□□□□ -1.01
MUC4-201ENST00000308466 ZNF137PP52743 207 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 TM4SF20Q53R12 229 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 IGFL3Q6UXB1 125 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 FER1L6-AS1Q8NA97 138 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 PMCHL2Q9BQD1 86 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 IL36BQ9NZH7 164 aa8.72□□□□□ -1.01
MUC4-201ENST00000308466 B9A039 149 aa8.71□□□□□ -1.01
MUC4-201ENST00000308466 F2Z2F3 143 aa8.71□□□□□ -1.01
MUC4-201ENST00000308466 LGALS7P47929 136 aa8.71□□□□□ -1.01
MUC4-201ENST00000308466 DIAPH2-AS1Q14236 149 aa8.71□□□□□ -1.01
MUC4-201ENST00000308466 TMEM30BQ3MIR4 351 aa8.71□□□□□ -1.01
MUC4-201ENST00000308466 Q8TCH9 128 aa8.71□□□□□ -1.01
MUC4-201ENST00000308466 CLEC7AQ9BXN2 247 aa8.71□□□□□ -1.01
MUC4-201ENST00000308466 PMS2P5A8MQ11 134 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 CT45A10P0DMU9 189 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 C12orf54Q6X4T0 127 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 MRPL52Q86TS9 123 aaKnown RBP8.71□□□□□ -1.02
MUC4-201ENST00000308466 SLC25A33Q9BSK2 321 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 SS18L2Q9UHA2 77 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 CACNA1AO00555 2505 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 IGHV3-35A0A0C4DH35 117 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 WNT2P09544 360 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 COL8A1P27658 744 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 CA7P43166 264 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 CRYBA4P53673 196 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 SLC25A34Q6PIV7 304 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 SSX8Q7RTT4 187 aa8.71□□□□□ -1.02
MUC4-201ENST00000308466 OR4F17Q8NGA8 305 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms