RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ZNF48Q96MX3 618 aaPredicted RBP9.34□□□□□ -0.91
TRIM40-205ENST00000307859 RPS10P5Q9NQ39 176 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 TMA7Q9Y2S6 64 aaKnown RBP9.34□□□□□ -0.91
TRIM40-205ENST00000307859 VPS13CQ709C8 3753 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 ZNF727A8MUV8 499 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 F6UZH7 168 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 Q5PR19 223 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 MORN5Q5VZ52 161 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 CST9LP1Q5W188 147 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 FAM110DQ8TAY7 271 aaPredicted RBP9.34□□□□□ -0.91
TRIM40-205ENST00000307859 SSX3Q99909 188 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 SLC25A2Q9BXI2 301 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 SMCO4Q9NRQ5 59 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 DOK5Q9P104 306 aa9.34□□□□□ -0.91
TRIM40-205ENST00000307859 YTHDF2Q9Y5A9 579 aaKnown RBP9.34□□□□□ -0.91
TRIM40-205ENST00000307859 A0A087WWC5 75 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 RNF223E7ERA6 249 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 ATP6V0E1O15342 81 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 IGKV1-17P01599 117 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 NPPCP23582 126 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 AKR1C3P42330 323 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 AKIRIN2Q53H80 203 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 PRSS57Q6UWY2 283 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 KRTAP1-3Q8IUG1 177 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 TMEM68Q96MH6 324 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 SMIM7Q9BQ49 75 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 PARLQ9H300 379 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 TUBA4BQ9H853 241 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 SDF2L1Q9HCN8 221 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 ZNF355PQ9NSJ1 428 aa9.33□□□□□ -0.92
TRIM40-205ENST00000307859 A6NDX4 124 aa9.32□□□□□ -0.92
TRIM40-205ENST00000307859 B4DEV8 164 aa9.32□□□□□ -0.92
TRIM40-205ENST00000307859 OR7C2O60412 319 aa9.32□□□□□ -0.92
TRIM40-205ENST00000307859 AMY1AP04745 511 aa9.32□□□□□ -0.92
TRIM40-205ENST00000307859 FABP1P07148 127 aa9.32□□□□□ -0.92
TRIM40-205ENST00000307859 HIST1H1BP16401 226 aaKnown RBP9.32□□□□□ -0.92
TRIM40-205ENST00000307859 CRIP2P52943 208 aaPredicted RBP9.32□□□□□ -0.92
TRIM40-205ENST00000307859 TIGITQ495A1 244 aa9.32□□□□□ -0.92
TRIM40-205ENST00000307859 TMEM219Q86XT9 240 aa9.32□□□□□ -0.92
TRIM40-205ENST00000307859 RPUSD4Q96CM3 377 aaKnown RBP9.32□□□□□ -0.92
TRIM40-205ENST00000307859 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
TRIM40-205ENST00000307859 THYN1Q9P016 225 aa9.32□□□□□ -0.92
TRIM40-205ENST00000307859 NAT8Q9UHE5 227 aa9.32□□□□□ -0.92
TRIM40-205ENST00000307859 SOX21Q9Y651 276 aaPredicted RBP9.32□□□□□ -0.92
TRIM40-205ENST00000307859 HIVEP2P31629 2446 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 TRAV30A0A087WSZ9 112 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 TRAV5A0A0B4J249 113 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 F8W735 103 aaPredicted RBP9.31□□□□□ -0.92
TRIM40-205ENST00000307859 TSPAN4O14817 238 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 HYPMO75409 117 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 IGHV4-31P0DP07 118 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 PSG1P11464 419 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 MFAP4P55083 255 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 KIAA0141Q14154 515 aaPredicted RBP9.31□□□□□ -0.92
TRIM40-205ENST00000307859 UNQ5815/PRO19632Q6UWF5 114 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 LINC00305Q7Z4B0 112 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 OR5T1Q8NG75 326 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 OR5AU1Q8NGC0 362 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 OR51G1Q8NGK1 321 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 OR1B1Q8NGR6 318 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 C11orf52Q96A22 123 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 FBN1P35555 2871 aaKnown RBP9.31□□□□□ -0.92
TRIM40-205ENST00000307859 H3BUX3 64 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 NDUFB8O95169 186 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 TOMM40O96008 361 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 TGFAP01135 160 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 ORM2P19652 201 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 FCGR2BP31994 310 aaPredicted RBP9.31□□□□□ -0.92
TRIM40-205ENST00000307859 TMEM241Q24JQ0 296 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 C19orf54Q5BKX5 351 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 C21orf62Q9NYP8 219 aa9.31□□□□□ -0.92
TRIM40-205ENST00000307859 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 SH2D7A6NKC9 451 aaPredicted RBP9.3□□□□□ -0.92
TRIM40-205ENST00000307859 LINC01548A6NM66 108 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 OR2J3O76001 311 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 FSHBP01225 129 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 RD3LP0DJH9 198 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 YPEL3P61236 119 aaPredicted RBP9.3□□□□□ -0.92
TRIM40-205ENST00000307859 UBE2L3P68036 154 aaKnown RBP9.3□□□□□ -0.92
TRIM40-205ENST00000307859 ECSCRQ19T08 205 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 ZNF674Q2M3X9 581 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 C16orf82Q7Z2V1 217 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 C15orf54Q8N8G6 183 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 MAPK1IP1LQ8NDC0 245 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 STXBP6Q8NFX7 210 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 VN1R17PQ8TDU5 208 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 Q96MF0 132 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 TXN2Q99757 166 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 PAXXQ9BUH6 204 aa9.3□□□□□ -0.92
TRIM40-205ENST00000307859 MAP1AP78559 2803 aaPredicted RBP9.3□□□□□ -0.92
TRIM40-205ENST00000307859 TRBV9A0A0B4J1U6 114 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 SCO2A0A1W2PP80 73 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 COLCA2A8K830 154 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 M0QZK8 103 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 WIPF1O43516 503 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 GNG7O60262 68 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 NDUFB4O95168 129 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 OR10J4P0C629 311 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 LYZP61626 148 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 RPL23P62829 140 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms