RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 C9JCJ5 164 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 CD5LO43866 347 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 Q8NFD4 153 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 OR11H1Q8NG94 326 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 LHFPL5Q8TAF8 219 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 ANAPC16Q96DE5 110 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 SEC14L6B5MCN3 397 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 PSG1P11464 419 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 ZFP36P26651 326 aaKnown RBP7.45□□□□□ -1.22
PTPRE-202ENST00000306042 RPL15P61313 204 aaKnown RBP7.45□□□□□ -1.22
PTPRE-202ENST00000306042 CD300CQ08708 224 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 STPG2Q8N412 459 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 CHAC2Q8WUX2 184 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 HIST1H2BAQ96A08 127 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 OVOL1O14753 267 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 RPL29P47914 159 aaKnown RBP7.45□□□□□ -1.22
PTPRE-202ENST00000306042 APOC4P55056 127 aa7.45□□□□□ -1.22
PTPRE-202ENST00000306042 MRPL54Q6P161 138 aaKnown RBP7.45□□□□□ -1.22
PTPRE-202ENST00000306042 ZNF688P0C7X2 276 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 FAM74A4Q5TZK3 123 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 MIR17HGQ75NE6 70 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 BBC3Q96PG8 261 aaPredicted RBP7.44□□□□□ -1.22
PTPRE-202ENST00000306042 RHPN1-AS1Q9BWJ2 59 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 A0A1W2PPI3 338 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 SCGB1D1O95968 90 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 NDPQ00604 133 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 DIAPH2-AS1Q14236 149 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 FAM53AQ6NSI3 398 aaPredicted RBP7.44□□□□□ -1.22
PTPRE-202ENST00000306042 NRN1Q9NPD7 142 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 TSSC4Q9Y5U2 329 aaPredicted RBP7.44□□□□□ -1.22
PTPRE-202ENST00000306042 AANATQ16613 207 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 IBA57Q5T440 356 aaKnown RBP7.44□□□□□ -1.22
PTPRE-202ENST00000306042 CYB561D1Q8N8Q1 229 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 NHLRC2Q8NBF2 726 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 G0S2P27469 103 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 RNASE4P34096 147 aaKnown RBP7.44□□□□□ -1.22
PTPRE-202ENST00000306042 LEPP41159 167 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 ZNF134P52741 427 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 MST1LQ2TV78 715 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 C8orf31Q8N9H6 132 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 OR4D5Q8NGN0 318 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 TBX15Q96SF7 602 aa7.44□□□□□ -1.22
PTPRE-202ENST00000306042 LOC102723971A0A1B0GUV8 181 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 RPL35AP18077 110 aaKnown RBP7.43□□□□□ -1.22
PTPRE-202ENST00000306042 BTCP35070 178 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 AMMECR1LQ6DCA0 310 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 ZNF880Q6PDB4 577 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 RCC1LQ96I51 464 aaKnown RBP7.43□□□□□ -1.22
PTPRE-202ENST00000306042 FGF23Q9GZV9 251 aaPredicted RBP7.43□□□□□ -1.22
PTPRE-202ENST00000306042 Q9H3A6 140 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 NPIPB6E9PJ23 425 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 UBE2L6O14933 153 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 CSN3P07498 182 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 COX19Q49B96 90 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 NMSQ5H8A3 153 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 C9orf66Q5T8R8 295 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 VN1R17PQ8TDU5 208 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 PCNTO95613 3336 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 ISLRO14498 428 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 CD81P60033 236 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 SUPT4H1P63272 117 aaKnown RBP7.43□□□□□ -1.22
PTPRE-202ENST00000306042 Q5BKY6 102 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 SMDT1Q9H4I9 107 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 EML6Q6ZMW3 1958 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 ARFGEF3Q5TH69 2177 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.43□□□□□ -1.22
PTPRE-202ENST00000306042 ZNF56Q15929 161 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 TRGV9Q99603 122 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 GSX1Q9H4S2 264 aaPredicted RBP7.43□□□□□ -1.22
PTPRE-202ENST00000306042 WDR83OSQ9Y284 106 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 NUP210LQ5VU65 1888 aa7.43□□□□□ -1.22
PTPRE-202ENST00000306042 PRRC2AP48634 2157 aaKnown RBP7.42□□□□□ -1.22
PTPRE-202ENST00000306042 INAFM1C9JVW0 142 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 ASIPP42127 132 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 TMEM88Q6PEY1 159 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 B4DEV8 164 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 TRGC1P0CF51 173 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 LMO4P61968 165 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 RNASEKQ6P5S7 137 aaKnown RBP7.42□□□□□ -1.22
PTPRE-202ENST00000306042 DPH3P1Q9H4G8 78 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 EML5Q05BV3 1969 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 PKD1L2Q7Z442 2459 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 NDUFB8O95169 186 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 NCOA6Q14686 2063 aaPredicted RBP7.42□□□□□ -1.22
PTPRE-202ENST00000306042 H3BQ15 152 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 IGHV4-31P0DP07 118 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 RNASE2P10153 161 aaKnown RBP7.42□□□□□ -1.22
PTPRE-202ENST00000306042 TREML4Q6UXN2 200 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 TMEM37Q8WXS4 190 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 SEC11CQ9BY50 192 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 OTORQ9NRC9 128 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 LRRK2Q5S007 2527 aa7.42□□□□□ -1.22
PTPRE-202ENST00000306042 FBLL1A6NHQ2 334 aaKnown RBP7.41□□□□□ -1.22
PTPRE-202ENST00000306042 TMPRSS5Q9H3S3 457 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 SDF2L1Q9HCN8 221 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 PCNX3Q9H6A9 2034 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 TRAV34A0A0B4J273 112 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 CDSNQ15517 529 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 ACTL10Q5JWF8 245 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 ZNF586Q9NXT0 402 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms