RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 S100A5P33763 92 aa12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 NUTF2P61970 127 aaKnown RBP12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 PYDC2Q56P42 97 aa12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 ACTL10Q5JWF8 245 aa12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 LGALS9CQ6DKI2 356 aa12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 OR8G2PQ6IF36 304 aa12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 SIGLEC15Q6ZMC9 328 aa12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 RNF125Q96EQ8 232 aa12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 SLC35E1Q96K37 410 aa12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 SLC25A21Q9BQT8 299 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 C11orf94C9JXX5 98 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 FAM90A26D6RGX4 464 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 PSG1P11464 419 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 NANOS2P60321 138 aaKnown RBP12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 RAB11AP62491 216 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 PSMG4Q5JS54 123 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 TMED4Q7Z7H5 227 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 CENPSQ8N2Z9 138 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 LRTM2Q8N967 370 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 Q8NAQ8 132 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 TRIM63Q969Q1 353 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 C1QTNF4Q9BXJ3 329 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 FBXL17Q9UF56 701 aa12.14□□□□□ -0.47
TRAPPC1-201ENST00000303731 ZFP92A6NM28 416 aa12.13□□□□□ -0.47
TRAPPC1-201ENST00000303731 KNCNA6PVL3 124 aa12.13□□□□□ -0.47
TRAPPC1-201ENST00000303731 ZNF705EA8MWA4 302 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-201ENST00000303731 MED6O75586 246 aa12.13□□□□□ -0.47
TRAPPC1-201ENST00000303731 GIG44P09565 113 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-201ENST00000303731 C2CD4CQ8TF44 421 aa12.13□□□□□ -0.47
TRAPPC1-201ENST00000303731 CIB3Q96Q77 187 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-201ENST00000303731 RAB40CQ96S21 281 aa12.13□□□□□ -0.47
TRAPPC1-201ENST00000303731 TMED3Q9Y3Q3 217 aa12.13□□□□□ -0.47
TRAPPC1-201ENST00000303731 KMT2AQ03164 3969 aa12.12□□□□□ -0.47
TRAPPC1-201ENST00000303731 PITX3O75364 302 aa12.12□□□□□ -0.47
TRAPPC1-201ENST00000303731 RPP30P78346 268 aaKnown RBP12.12□□□□□ -0.47
TRAPPC1-201ENST00000303731 GAMTQ14353 236 aa12.12□□□□□ -0.47
TRAPPC1-201ENST00000303731 V9GYH0 126 aa12.12□□□□□ -0.47
TRAPPC1-201ENST00000303731 CFDP00746 253 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC1-201ENST00000303731 C4BPBP20851 252 aa12.11□□□□□ -0.47
TRAPPC1-201ENST00000303731 VAMP1P23763 118 aa12.11□□□□□ -0.47
TRAPPC1-201ENST00000303731 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC1-201ENST00000303731 C1orf194Q5T5A4 169 aa12.11□□□□□ -0.47
TRAPPC1-201ENST00000303731 SAMD13Q5VXD3 122 aa12.11□□□□□ -0.47
TRAPPC1-201ENST00000303731 TBC1D24Q9ULP9 559 aa12.11□□□□□ -0.47
TRAPPC1-201ENST00000303731 IGHV4-28A0A0C4DH34 117 aa12.1□□□□□ -0.47
TRAPPC1-201ENST00000303731 CCDC160A6NGH7 325 aa12.1□□□□□ -0.47
TRAPPC1-201ENST00000303731 SNRPGP15A8MWD9 76 aa12.1□□□□□ -0.47
TRAPPC1-201ENST00000303731 DEFB4AO15263 64 aa12.1□□□□□ -0.47
TRAPPC1-201ENST00000303731 UBE2MP61081 183 aaKnown RBP12.1□□□□□ -0.47
TRAPPC1-201ENST00000303731 CSNK1G2-AS1Q8NCQ2 148 aa12.1□□□□□ -0.47
TRAPPC1-201ENST00000303731 TRGV9Q99603 122 aa12.1□□□□□ -0.47
TRAPPC1-201ENST00000303731 PBDC1Q9BVG4 233 aa12.1□□□□□ -0.47
TRAPPC1-201ENST00000303731 SFT2D2O95562 160 aa12.09□□□□□ -0.47
TRAPPC1-201ENST00000303731 HLA-DRB4P13762 266 aa12.09□□□□□ -0.47
TRAPPC1-201ENST00000303731 S100A7P31151 101 aa12.09□□□□□ -0.47
TRAPPC1-201ENST00000303731 ID1P41134 155 aa12.09□□□□□ -0.47
TRAPPC1-201ENST00000303731 ZNF79Q15937 498 aa12.09□□□□□ -0.47
TRAPPC1-201ENST00000303731 SPANXN2Q5MJ10 180 aa12.09□□□□□ -0.47
TRAPPC1-201ENST00000303731 CCDC190Q86UF4 302 aa12.09□□□□□ -0.47
TRAPPC1-201ENST00000303731 HLA-DRB4X5D2U9 266 aa12.09□□□□□ -0.47
TRAPPC1-201ENST00000303731 X6R8D5 127 aa12.09□□□□□ -0.47
TRAPPC1-201ENST00000303731 IGKV1D-37A0A075B6S9 117 aa12.08□□□□□ -0.48
TRAPPC1-201ENST00000303731 H3BMM0 161 aa12.08□□□□□ -0.48
TRAPPC1-201ENST00000303731 ZNF701M0R085 212 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC1-201ENST00000303731 SYNGR2O43760 224 aa12.08□□□□□ -0.48
TRAPPC1-201ENST00000303731 RBMY1A1P0DJD3 496 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-201ENST00000303731 RBMY1CP0DJD4 496 aa12.08□□□□□ -0.48
TRAPPC1-201ENST00000303731 PSMB3P49720 205 aa12.08□□□□□ -0.48
TRAPPC1-201ENST00000303731 ZNF90Q03938 601 aa12.08□□□□□ -0.48
TRAPPC1-201ENST00000303731 RBMY1FQ15415 496 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-201ENST00000303731 LYZP61626 148 aa12.07□□□□□ -0.48
TRAPPC1-201ENST00000303731 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
TRAPPC1-201ENST00000303731 SPATA31B1PQ5VZV4 182 aa12.07□□□□□ -0.48
TRAPPC1-201ENST00000303731 GGNBP1Q5YKI7 109 aa12.07□□□□□ -0.48
TRAPPC1-201ENST00000303731 THAP8Q8NA92 274 aa12.07□□□□□ -0.48
TRAPPC1-201ENST00000303731 PPP1R14BQ96C90 147 aa12.07□□□□□ -0.48
TRAPPC1-201ENST00000303731 CLUHP3Q96NS8 147 aa12.07□□□□□ -0.48
TRAPPC1-201ENST00000303731 CLEC5AQ9NY25 188 aa12.07□□□□□ -0.48
TRAPPC1-201ENST00000303731 PAIP2BQ9ULR5 123 aaKnown RBP12.07□□□□□ -0.48
TRAPPC1-201ENST00000303731 SLC45A2Q9UMX9 530 aa12.07□□□□□ -0.48
TRAPPC1-201ENST00000303731 TRAV10A0A0B4J240 114 aa12.06□□□□□ -0.48
TRAPPC1-201ENST00000303731 NAP1L6A6NFF2 107 aa12.06□□□□□ -0.48
TRAPPC1-201ENST00000303731 IAPPP10997 89 aa12.06□□□□□ -0.48
TRAPPC1-201ENST00000303731 HLA-DMBP28068 263 aa12.06□□□□□ -0.48
TRAPPC1-201ENST00000303731 INPP1P49441 399 aa12.06□□□□□ -0.48
TRAPPC1-201ENST00000303731 MEOX2P50222 304 aa12.06□□□□□ -0.48
TRAPPC1-201ENST00000303731 FOXI2Q6ZQN5 318 aa12.06□□□□□ -0.48
TRAPPC1-201ENST00000303731 FRAS1Q86XX4 4008 aa12.06□□□□□ -0.48
TRAPPC1-201ENST00000303731 ISLRO14498 428 aa12.05□□□□□ -0.48
TRAPPC1-201ENST00000303731 OR8I2Q8N0Y5 310 aa12.05□□□□□ -0.48
TRAPPC1-201ENST00000303731 RPP25LQ8N5L8 163 aaKnown RBP12.05□□□□□ -0.48
TRAPPC1-201ENST00000303731 COQ8AQ8NI60 647 aa12.05□□□□□ -0.48
TRAPPC1-201ENST00000303731 NEU1Q99519 415 aa12.05□□□□□ -0.48
TRAPPC1-201ENST00000303731 SAV1Q9H4B6 383 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC1-201ENST00000303731 ELOA3CA0A087WX78 387 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC1-201ENST00000303731 SMIM9A6NGZ8 99 aa12.04□□□□□ -0.48
TRAPPC1-201ENST00000303731 IGLL5B9A064 214 aa12.04□□□□□ -0.48
TRAPPC1-201ENST00000303731 HOXB5P09067 269 aa12.04□□□□□ -0.48
TRAPPC1-201ENST00000303731 GALR1P47211 349 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms