RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SCN4AP35499 1836 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 SPXQ9BT56 116 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 CSTL1Q9H114 145 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 TRPM6Q9BX84 2022 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 CD55P08174 381 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 MORN2Q502X0 79 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 TEX38Q6PEX7 206 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 NEUROG3Q9Y4Z2 214 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 LTBP1Q14766 1721 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 MMP23AO75900 390 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 DEFB130BP0DP73 79 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 DEFB130AP0DP74 79 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 HAMPP81172 84 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 TPTE2P1Q5T6R2 138 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 TRBV6-7A0A0A0MS04 114 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 CELA3BP08861 270 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 LY6G5BQ8NDX9 201 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 LYNX1G3V0Z9 82 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 NDUFS5O43920 106 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 LYNX1P0DP58 116 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 C15orf32Q32M92 178 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 LAIR2Q6ISS4 152 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 LYZL1Q6UWQ5 148 aa8.6□□□□□ -1.03
CLIP1-201ENST00000302528 CLPSL1A2RUU4 121 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 PMS2P5A8MQ11 134 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 CT83Q5H943 113 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 UNC13CQ8NB66 2214 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST1H2BKO60814 126 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST1H2BJP06899 126 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST1H2BOP23527 126 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST1H2BBP33778 126 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST1H2BDP58876 126 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST1H2BCP62807 126 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST2H2BEQ16778 126 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-201ENST00000302528 TNFRSF14Q92956 283 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST1H2BHQ93079 126 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST1H2BNQ99877 126 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 HIST1H2BMQ99879 126 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 UBL5Q9BZL1 73 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 FCN3O75636 299 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 TNFSF13O75888 250 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 INAFM2P0DMQ5 153 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 MAJINQ3KP22 176 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 C18orf12Q96KH6 178 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 RAMP3O60896 148 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 ZNF138P52744 262 aa8.59□□□□□ -1.03
CLIP1-201ENST00000302528 CTSBP07858 339 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 CABIN1Q9Y6J0 2220 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 TIAF1O95411 115 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 TMEM219Q86XT9 240 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 CHCHD2Q9Y6H1 151 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-201ENST00000302528 A0A087X0K7 114 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 EREGO14944 169 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 CEACAM1P13688 526 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 PMVKQ15126 192 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 PRR31Q5SQ13 230 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 EXOC3-AS1Q8N2X6 119 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 C14orf178Q8N769 122 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-201ENST00000302528 FAM181AQ8N9Y4 354 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 OR10W1Q8NGF6 305 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 MDC1Q14676 2089 aaKnown RBP8.58□□□□□ -1.04
CLIP1-201ENST00000302528 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-201ENST00000302528 hDV102S1A0JD36 115 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 RNF222A6NCQ9 220 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 IGHG3P01860 377 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 IGFBP3P17936 291 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-201ENST00000302528 DUTP33316 252 aaKnown RBP8.58□□□□□ -1.04
CLIP1-201ENST00000302528 C9orf106Q8NAJ2 232 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 MBNL3Q9NUK0 354 aaKnown RBP8.58□□□□□ -1.04
CLIP1-201ENST00000302528 SVILO95425 2214 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 PSG1P11464 419 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 DSCR9P59020 149 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 ZNF124Q15973 351 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 C9orf139Q6ZV77 190 aa8.58□□□□□ -1.04
CLIP1-201ENST00000302528 TRIP12Q14669 1992 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-201ENST00000302528 ZNF646O15015 1829 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-201ENST00000302528 F8VVB4 439 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 F8VWA3 439 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 ZCCHC24Q8N2G6 241 aaKnown RBP8.57□□□□□ -1.04
CLIP1-201ENST00000302528 RPRMLQ8N4K4 120 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 CTHRC1Q96CG8 243 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 MLNRO43193 412 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-201ENST00000302528 HIST1H2BLQ99880 126 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 POLR2AP24928 1970 aaKnown RBP8.57□□□□□ -1.04
CLIP1-201ENST00000302528 IGKV1D-13A0A0B4J2D9 117 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 C4orf51C9J302 202 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 IGKV1-13P0DP09 117 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 KIR3DS1Q14943 382 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 C5orf47Q569G3 176 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 FAM166AQ6J272 317 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 ATRAIDQ6UW56 229 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 TMEM158Q8WZ71 300 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 CHAC1Q9BUX1 264 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 NDPQ00604 133 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 CSRP2Q16527 193 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 SPANXA1Q9NS26 97 aa8.57□□□□□ -1.04
CLIP1-201ENST00000302528 CLPSP04118 112 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 C3orf56Q8N813 242 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms