RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 SMCO3A2RU48 225 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 ZFP92A6NM28 416 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 NUPL2O15504 423 aaKnown RBP7.23□□□□□ -1.25
RFX3-201ENST00000302303 TOMM40O96008 361 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 MYCNOSP40205 109 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 AKR1C1Q04828 323 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 OPCMLQ14982 345 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 PATE2Q6UY27 113 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 CYP2G1PQ6ZSU1 146 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 LINC00482Q8N8I6 264 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 RSG1Q9BU20 258 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 NPCDR1Q9BY65 106 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 GAR1Q9NY12 217 aaKnown RBP7.23□□□□□ -1.25
RFX3-201ENST00000302303 PUS1Q9Y606 427 aaKnown RBP eCLIP7.23□□□□□ -1.25
RFX3-201ENST00000302303 PKD1L1Q8TDX9 2849 aa7.23□□□□□ -1.25
RFX3-201ENST00000302303 LGALS9O00182 355 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 NDUFA4O00483 81 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 BCL2L11O43521 198 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 DFFBO76075 338 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 YIF1AO95070 293 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 RD3LP0DJH9 198 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 FGF7P21781 194 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 NUP62P37198 522 aaPredicted RBP7.22□□□□□ -1.25
RFX3-201ENST00000302303 RPL29P47914 159 aaKnown RBP7.22□□□□□ -1.25
RFX3-201ENST00000302303 SYNJ2BPP57105 145 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 PLP1P60201 277 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 USF2Q15853 346 aaPredicted RBP7.22□□□□□ -1.25
RFX3-201ENST00000302303 MIC13Q5XKP0 118 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 ZNF600Q6ZNG1 722 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 ARPC5LQ9BPX5 153 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 ARL6Q9H0F7 186 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 TMEM213A2RRL7 107 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 TAAR5O14804 337 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 APOHP02749 345 aaPredicted RBP7.22□□□□□ -1.25
RFX3-201ENST00000302303 ATP6V0CP27449 155 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 CAMLGP49069 296 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 TM4SF20Q53R12 229 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 REC114Q7Z4M0 266 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 WFDC9Q8NEX5 89 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 BPIFCQ8NFQ6 507 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 TMEM37Q8WXS4 190 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 TMEM190Q8WZ59 177 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 GINS3Q9BRX5 216 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 SH3BGRL3Q9H299 93 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 MRPL27Q9P0M9 148 aaKnown RBP7.22□□□□□ -1.25
RFX3-201ENST00000302303 U3KQE9 123 aa7.22□□□□□ -1.25
RFX3-201ENST00000302303 WNK1Q9H4A3 2382 aa7.21□□□□□ -1.25
RFX3-201ENST00000302303 A8MWP6 167 aa7.21□□□□□ -1.26
RFX3-201ENST00000302303 MPDU1O75352 247 aa7.21□□□□□ -1.26
RFX3-201ENST00000302303 C8orf88P0DMB2 117 aa7.21□□□□□ -1.26
RFX3-201ENST00000302303 ZP3P21754 424 aa7.21□□□□□ -1.26
RFX3-201ENST00000302303 RELQ04864 619 aaPredicted RBP7.21□□□□□ -1.26
RFX3-201ENST00000302303 RPEL1Q2QD12 228 aa7.21□□□□□ -1.26
RFX3-201ENST00000302303 GCSAMLQ5JQS6 135 aa7.21□□□□□ -1.26
RFX3-201ENST00000302303 C1QL4Q86Z23 238 aa7.21□□□□□ -1.26
RFX3-201ENST00000302303 OR51G1Q8NGK1 321 aa7.21□□□□□ -1.26
RFX3-201ENST00000302303 Q8WTZ3 238 aa7.21□□□□□ -1.26
RFX3-201ENST00000302303 DPF1Q92782 380 aa7.21□□□□□ -1.26
RFX3-201ENST00000302303 K7EMT4 169 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 ZNF207O43670 478 aaKnown RBP7.2□□□□□ -1.26
RFX3-201ENST00000302303 JTBO76095 146 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 IFNA5P01569 189 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 IL4P05112 153 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 CSN3P07498 182 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 SPP1P10451 314 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 CRYBB3P26998 211 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 SELENOTP62341 195 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 ZNF266Q14584 549 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 MORN5Q5VZ52 161 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 HSD17B11Q8NBQ5 300 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 OR4F17Q8NGA8 305 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 STOML3Q8TAV4 291 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 RNF125Q96EQ8 232 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 OR4F4Q96R69 305 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 VSIRQ9H7M9 311 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 SLC39A9Q9NUM3 307 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 PXMP4Q9Y6I8 212 aa7.2□□□□□ -1.26
RFX3-201ENST00000302303 ZNF320A2RRD8 509 aa7.19□□□□□ -1.26
RFX3-201ENST00000302303 C2orf70A6NJV1 201 aa7.19□□□□□ -1.26
RFX3-201ENST00000302303 CFDP00746 253 aaPredicted RBP7.19□□□□□ -1.26
RFX3-201ENST00000302303 FAM106AQ4KMX7 169 aa7.19□□□□□ -1.26
RFX3-201ENST00000302303 OR9G4Q8NGQ1 327 aa7.19□□□□□ -1.26
RFX3-201ENST00000302303 PPP1R14BQ96C90 147 aa7.19□□□□□ -1.26
RFX3-201ENST00000302303 C17orf77Q96MU5 243 aa7.19□□□□□ -1.26
RFX3-201ENST00000302303 TIMM9Q9Y5J7 89 aa7.19□□□□□ -1.26
RFX3-201ENST00000302303 KANTRA0A1W2PQU2 76 aa7.18□□□□□ -1.26
RFX3-201ENST00000302303 OVOL1O14753 267 aa7.18□□□□□ -1.26
RFX3-201ENST00000302303 HNRNPCP07910 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
RFX3-201ENST00000302303 CBLN1P23435 193 aa7.18□□□□□ -1.26
RFX3-201ENST00000302303 ELLP55199 621 aaPredicted RBP7.18□□□□□ -1.26
RFX3-201ENST00000302303 B2MP61769 119 aa7.18□□□□□ -1.26
RFX3-201ENST00000302303 BAP18Q8IXM2 172 aa7.18□□□□□ -1.26
RFX3-201ENST00000302303 RPP25LQ8N5L8 163 aaKnown RBP7.18□□□□□ -1.26
RFX3-201ENST00000302303 OR2G3Q8NGZ4 309 aa7.18□□□□□ -1.26
RFX3-201ENST00000302303 SCGB1C1Q8TD33 95 aa7.18□□□□□ -1.26
RFX3-201ENST00000302303 UHRF2Q96PU4 802 aa7.18□□□□□ -1.26
RFX3-201ENST00000302303 PSMG3Q9BT73 122 aaPredicted RBP7.18□□□□□ -1.26
RFX3-201ENST00000302303 C20orf24Q9BUV8 137 aa7.18□□□□□ -1.26
RFX3-201ENST00000302303 ZNF471Q9BX82 626 aaPredicted RBP7.18□□□□□ -1.26
RFX3-201ENST00000302303 SLC25A32Q9H2D1 315 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms