RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 IGFL4Q6B9Z1 124 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 TMEM18Q96B42 140 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 HSPB9Q9BQS6 159 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 UBTD1Q9HAC8 227 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 IGHV3-66A0A0C4DH42 116 aa12.56□□□□□ -0.4
CHAF1A-201ENST00000301280 SHISA9B4DS77 424 aa12.56□□□□□ -0.4
CHAF1A-201ENST00000301280 CSN3P07498 182 aa12.56□□□□□ -0.4
CHAF1A-201ENST00000301280 C8orf88P0DMB2 117 aa12.56□□□□□ -0.4
CHAF1A-201ENST00000301280 BTF3P20290 206 aaKnown RBP12.56□□□□□ -0.4
CHAF1A-201ENST00000301280 LINC00527Q9UJ94 153 aa12.56□□□□□ -0.4
CHAF1A-201ENST00000301280 AMMECR1Q9Y4X0 333 aaPredicted RBP12.56□□□□□ -0.4
CHAF1A-201ENST00000301280 M0QZ24 198 aa12.56□□□□□ -0.4
CHAF1A-201ENST00000301280 LCN2P80188 198 aa12.56□□□□□ -0.4
CHAF1A-201ENST00000301280 IBA57Q5T440 356 aaKnown RBP12.56□□□□□ -0.4
CHAF1A-201ENST00000301280 ISLRO14498 428 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 APOBEC3AP31941 199 aaPredicted RBP12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 RPEL1Q2QD12 228 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 ST6GALNAC3Q8NDV1 305 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 MTORP42345 2549 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 A6NNC1 897 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 TIMM23O14925 209 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 ZNF253O75346 499 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 SERF1AO75920 110 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 VENTXO95231 258 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 TDGF1P3P51864 188 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 SUB1P53999 127 aaKnown RBP eCLIP12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 POU2AF1Q16633 256 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 ZNF672Q499Z4 452 aaPredicted RBP12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 CMTM2Q8TAZ6 248 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 C22orf15Q8WYQ4 148 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 BTF3L4Q96K17 158 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 DLL1O00548 723 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 TCF24Q7RTU0 167 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 EXOC3-AS1Q8N2X6 119 aa12.55□□□□□ -0.4
CHAF1A-201ENST00000301280 IGHV2-26A0A0B4J1V2 119 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 A0A1W2PN81 502 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 Q71RC1 249 aaPredicted RBP12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 CORO2AQ92828 525 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 TMEM68Q96MH6 324 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 TMEM133Q9H2Q1 129 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 FKBP11Q9NYL4 201 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 LSM4Q9Y4Z0 139 aaKnown RBP12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 AMTP48728 403 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 COL25A1Q9BXS0 654 aaPredicted RBP12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 ZANQ9Y493 2812 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 USF1P22415 310 aaPredicted RBP12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 SRIP30626 198 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 OR5B3Q8NH48 314 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 OSR1Q8TAX0 266 aaPredicted RBP12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 TBX15Q96SF7 602 aa12.54□□□□□ -0.4
CHAF1A-201ENST00000301280 IGKV3-7A0A075B6H7 116 aa12.53□□□□□ -0.4
CHAF1A-201ENST00000301280 FNDC10F2Z333 226 aa12.53□□□□□ -0.4
CHAF1A-201ENST00000301280 PMCHL1Q16048 86 aa12.53□□□□□ -0.4
CHAF1A-201ENST00000301280 ZNF503Q96F45 646 aa12.53□□□□□ -0.4
CHAF1A-201ENST00000301280 ELOVL5Q9NYP7 299 aa12.53□□□□□ -0.4
CHAF1A-201ENST00000301280 RAB4AP20338 218 aa12.53□□□□□ -0.4
CHAF1A-201ENST00000301280 C1orf194Q5T5A4 169 aa12.53□□□□□ -0.4
CHAF1A-201ENST00000301280 PDPNQ86YL7 162 aa12.53□□□□□ -0.4
CHAF1A-201ENST00000301280 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
CHAF1A-201ENST00000301280 KIR2DL5BA0A0G2JN68 375 aa12.52□□□□□ -0.4
CHAF1A-201ENST00000301280 KIR2DL5BA0A0G2JPC4 375 aa12.52□□□□□ -0.4
CHAF1A-201ENST00000301280 CGB1A6NKQ9 187 aa12.52□□□□□ -0.4
CHAF1A-201ENST00000301280 SRP14P37108 136 aaKnown RBP12.52□□□□□ -0.4
CHAF1A-201ENST00000301280 Q6ZWC4 215 aa12.52□□□□□ -0.4
CHAF1A-201ENST00000301280 PRNTQ86SH4 94 aa12.52□□□□□ -0.4
CHAF1A-201ENST00000301280 KIR2DL5AQ8N109 375 aa12.52□□□□□ -0.4
CHAF1A-201ENST00000301280 CHODLQ9H9P2 273 aa12.52□□□□□ -0.4
CHAF1A-201ENST00000301280 GNB4Q9HAV0 340 aa12.52□□□□□ -0.4
CHAF1A-201ENST00000301280 ZNF331Q9NQX6 463 aaPredicted RBP12.52□□□□□ -0.4
CHAF1A-201ENST00000301280 TMEM30BQ3MIR4 351 aa12.52□□□□□ -0.41
CHAF1A-201ENST00000301280 WNT10AQ9GZT5 417 aa12.52□□□□□ -0.41
CHAF1A-201ENST00000301280 TMEM167BQ9NRX6 74 aa12.52□□□□□ -0.41
CHAF1A-201ENST00000301280 CD99P14209 185 aa12.52□□□□□ -0.41
CHAF1A-201ENST00000301280 SPOCK3Q9BQ16 436 aa12.52□□□□□ -0.41
CHAF1A-201ENST00000301280 ZNF207O43670 478 aaKnown RBP12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 C17orf77Q96MU5 243 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 TXNDC17Q9BRA2 123 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 NDUFA4L2Q9NRX3 87 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 NAGKQ9UJ70 344 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 C22orf46C9J442 243 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 J3KRW8 73 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 PRRX1P54821 245 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 PRR20EP86478 221 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 PRR20CP86479 221 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 PRR20DP86480 221 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 PRR20BP86481 221 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 PRR20AP86496 221 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 VSTM2AQ8TAG5 236 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 TMEM186Q96B77 213 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 ITPR1Q14643 2758 aa12.51□□□□□ -0.41
CHAF1A-201ENST00000301280 CSMD2Q7Z408 3487 aa12.5□□□□□ -0.41
CHAF1A-201ENST00000301280 SIAH2O43255 324 aa12.5□□□□□ -0.41
CHAF1A-201ENST00000301280 RNASEKQ6P5S7 137 aaKnown RBP12.5□□□□□ -0.41
CHAF1A-201ENST00000301280 PATE2Q6UY27 113 aa12.5□□□□□ -0.41
CHAF1A-201ENST00000301280 GOLT1AQ6ZVE7 132 aa12.5□□□□□ -0.41
CHAF1A-201ENST00000301280 SRSF12Q8WXF0 261 aaKnown RBP12.5□□□□□ -0.41
CHAF1A-201ENST00000301280 DAZAP1Q96EP5 407 aaKnown RBP12.5□□□□□ -0.41
CHAF1A-201ENST00000301280 PGLYRP4Q96LB8 373 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms