RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 NPSP0C0P6 89 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 CKS2P33552 79 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 HBBP68871 147 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 FOXL1Q12952 345 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 RIGQ13278 110 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 TMEM70Q9BUB7 260 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 CCL21O00585 134 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 BTF3P20290 206 aaKnown RBP10.88□□□□□ -0.67
CASC4-201ENST00000299957 COX19Q49B96 90 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 DIRC2Q96SL1 478 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 Q9H3A6 140 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 LTBP2Q14767 1821 aa10.88□□□□□ -0.67
CASC4-201ENST00000299957 SRRM4A7MD48 611 aaKnown RBP10.87□□□□□ -0.67
CASC4-201ENST00000299957 PRCDQ00LT1 54 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 PRR7Q8TB68 274 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 FAM168AQ92567 244 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 C5orf30Q96GV9 206 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 RCHY1Q96PM5 261 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 TMEM208Q9BTX3 173 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 A0A1W2PNU3 283 aaPredicted RBP10.87□□□□□ -0.67
CASC4-201ENST00000299957 C17orf100A8MU93 164 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 M0R3E3 92 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 APOHP02749 345 aaPredicted RBP10.87□□□□□ -0.67
CASC4-201ENST00000299957 WNT2P09544 360 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 CA7P43166 264 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 KHDC1LQ5JSQ8 128 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 FAM162BQ5T6X4 162 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 SLC25A34Q6PIV7 304 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 RPUSD1Q9UJJ7 312 aaKnown RBP10.87□□□□□ -0.67
CASC4-201ENST00000299957 IGHV1-69-2A0A0G2JMI3 117 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 ZNF295-AS1Q8N0V1 137 aa10.87□□□□□ -0.67
CASC4-201ENST00000299957 GGTLC3B5MD39 225 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 IGLV2-14P01704 120 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 WT1P19544 449 aaPredicted RBP10.86□□□□□ -0.67
CASC4-201ENST00000299957 OSR1Q8TAX0 266 aaPredicted RBP10.86□□□□□ -0.67
CASC4-201ENST00000299957 AP5S1Q9NUS5 200 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 F5H697 171 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 TMEM136Q6ZRR5 245 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 SLC25A15Q9Y619 301 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 TMEM189A5PLL7 270 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 MC5RP33032 325 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 NIT1Q86X76 327 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 SCNM1Q9BWG6 230 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 TPSG1Q9NRR2 321 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 LINC00527Q9UJ94 153 aa10.86□□□□□ -0.67
CASC4-201ENST00000299957 GCSHP23434 173 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 SSBP2P81877 361 aaPredicted RBP10.85□□□□□ -0.67
CASC4-201ENST00000299957 IZUMO1RA6ND01 250 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 IGKV3-15P01624 115 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 CNTFRP26992 372 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 TMEM200BQ69YZ2 307 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 C11orf53Q8IXP5 236 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 OR4A5Q8NH83 315 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 RAB1CQ92928 201 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 GPR82Q96P67 336 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 GP6Q9HCN6 339 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 TMEM265A0A087WTH1 108 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 PMS2P5A8MQ11 134 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 K7EN84 100 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 TNFSF13O75888 250 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 GPX1P07203 203 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 ARL6IP6Q8N6S5 226 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 NUP35Q8NFH5 326 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 EPDR1Q9UM22 224 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 HIVEP3Q5T1R4 2406 aa10.85□□□□□ -0.67
CASC4-201ENST00000299957 SFTA2Q6UW10 78 aa10.84□□□□□ -0.67
CASC4-201ENST00000299957 SFXN3Q9BWM7 321 aa10.84□□□□□ -0.67
CASC4-201ENST00000299957 CLEC7AQ9BXN2 247 aa10.84□□□□□ -0.67
CASC4-201ENST00000299957 SLAQ13239 276 aa10.84□□□□□ -0.67
CASC4-201ENST00000299957 NPIPB11E5RHQ5 1161 aa10.84□□□□□ -0.67
CASC4-201ENST00000299957 TMEM186Q96B77 213 aa10.84□□□□□ -0.67
CASC4-201ENST00000299957 HSPB8Q9UJY1 196 aa10.84□□□□□ -0.67
CASC4-201ENST00000299957 SPTBN5Q9NRC6 3674 aaKnown RBP10.84□□□□□ -0.67
CASC4-201ENST00000299957 LMO1P25800 156 aa10.84□□□□□ -0.67
CASC4-201ENST00000299957 VDAC2P45880 294 aaPredicted RBP10.84□□□□□ -0.67
CASC4-201ENST00000299957 MORN5Q5VZ52 161 aa10.84□□□□□ -0.67
CASC4-201ENST00000299957 RPP21Q9H633 154 aaKnown RBP10.84□□□□□ -0.67
CASC4-201ENST00000299957 OSTCQ9NRP0 149 aa10.84□□□□□ -0.67
CASC4-201ENST00000299957 TMEM131Q92545 1883 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 C7orf71A4D174 169 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 RELQ04864 619 aaPredicted RBP10.83□□□□□ -0.68
CASC4-201ENST00000299957 GRAMD2BQ96HH9 432 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 C2orf88Q9BSF0 95 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 THYN1Q9P016 225 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 LINC00312Q9Y6C7 94 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 POLQO75417 2590 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 HCFC1P51610 2035 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 MGPP08493 103 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 REV3LO60673 3130 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 A0A1W2PRE2 83 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 A0A1W2PS18 150 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 DLEU1O43261 78 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 NCR2O95944 276 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 TDGF1P3P51864 188 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 C2orf83Q53S99 150 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 PLSCR4Q9NRQ2 329 aa10.83□□□□□ -0.68
CASC4-201ENST00000299957 OR2T8A6NH00 312 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 C15orf65H3BRN8 121 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 HLA-DRB1P01911 266 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 RNASE2P10153 161 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms