RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 ZNF576Q9H609 170 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 TRAV8-1A0A0A6YYK1 113 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 CT45A6P0DMU7 189 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 CT45A5P0DMU8 189 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 CT45A7P0DMV0 189 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 C10orf55Q5SWW7 151 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 TMEM105Q8N8V8 129 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 OR10AG1Q8NH19 301 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 ITLN1Q8WWA0 313 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 MRPL36Q9P0J6 103 aaKnown RBP10.51□□□□□ -0.73
TVP23A-201ENST00000299866 DSPP15924 2871 aaKnown RBP10.51□□□□□ -0.73
TVP23A-201ENST00000299866 NAV3Q8IVL0 2385 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 SRRM5B3KS81 715 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 CECR9P0C854 216 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 ACP1P24666 158 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 COL8A1P27658 744 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 KIR3DS1Q14943 382 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 OR2K2Q8NGT1 345 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 PRSS3P2Q8NHM4 247 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 NEU4Q8WWR8 484 aaPredicted RBP10.51□□□□□ -0.73
TVP23A-201ENST00000299866 FLYWCH2Q96CP2 140 aaKnown RBP10.51□□□□□ -0.73
TVP23A-201ENST00000299866 ADTRPQ96IZ2 230 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 ASCL2Q99929 193 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 NDFIP1Q9BT67 221 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 AP5S1Q9NUS5 200 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 PILRBQ9UKJ0 227 aa10.51□□□□□ -0.73
TVP23A-201ENST00000299866 TRGV5A0A0B4J1U4 118 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 A0A0G2JLM5 398 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 NHLH1Q02575 133 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 Q71RC1 249 aaPredicted RBP10.5□□□□□ -0.73
TVP23A-201ENST00000299866 CIARTQ8N365 385 aaPredicted RBP10.5□□□□□ -0.73
TVP23A-201ENST00000299866 TPPP3Q9BW30 176 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 DMDP11532 3685 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 KBTBD11-OT1A0A1B0GTJ5 212 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 A6NDN8 102 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 GNG7O60262 68 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 FXYD7P58549 80 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 RNFT1Q5M7Z0 435 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 ZNF747Q9BV97 191 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 PRSS22Q9GZN4 317 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 THYN1Q9P016 225 aa10.5□□□□□ -0.73
TVP23A-201ENST00000299866 LOC389332A0A1B0GUA5 103 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 K7EP34 96 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 POU2AF1Q16633 256 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 TM4SF20Q53R12 229 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 CACNG8Q8WXS5 425 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 TMEM186Q96B77 213 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 MLST8Q9BVC4 326 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 CHTOPQ9Y3Y2 248 aaKnown RBP10.49□□□□□ -0.73
TVP23A-201ENST00000299866 PLXNB1O43157 2135 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 IGHV3-21A0A0B4J1V1 117 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 H3BRM9 83 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 RPL24P83731 157 aaKnown RBP10.49□□□□□ -0.73
TVP23A-201ENST00000299866 HARBI1Q96MB7 349 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 TCRBV4S1A1TA0A5B7 111 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 hADV38S2A0JD32 116 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 KLRC4-KLRK1H3BQV0 150 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 SPRY3O43610 288 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 FAM106CPP0CH98 169 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 CR1LQ2VPA4 569 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 FAM106AQ4KMX7 169 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 PRSS57Q6UWY2 283 aa10.49□□□□□ -0.73
TVP23A-201ENST00000299866 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.49□□□□□ -0.73
TVP23A-201ENST00000299866 C19orf71A6NCJ1 209 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 MYCNOSP40205 109 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 PLP1P60201 277 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 OR4A5Q8NH83 315 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 SOX21Q9Y651 276 aaPredicted RBP10.48□□□□□ -0.73
TVP23A-201ENST00000299866 IGKV1D-37A0A075B6S9 117 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 CGB3P0DN86 165 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 CGB7P0DN87 165 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 PRNTQ86SH4 94 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 SPCS1Q9Y6A9 102 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 FAM87AP0C7U9 286 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 CSN1S1P47710 185 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 KLF12Q9Y4X4 402 aa10.48□□□□□ -0.73
TVP23A-201ENST00000299866 F11RQ9Y624 299 aaKnown RBP10.48□□□□□ -0.73
TVP23A-201ENST00000299866 FSTL3O95633 263 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 ARMS2P0C7Q2 107 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 APELAP0DMC3 54 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 WT1-ASQ06250 92 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 PERPQ96FX8 193 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 Q9H3A6 140 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 JKAMPQ9P055 326 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 SSUH2Q9Y2M2 353 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 IGKV3-15P01624 115 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 FGF6P10767 208 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 LOXL1Q08397 574 aaPredicted RBP10.47□□□□□ -0.73
TVP23A-201ENST00000299866 MSMPQ1L6U9 139 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 PEAR1Q5VY43 1037 aaPredicted RBP10.47□□□□□ -0.73
TVP23A-201ENST00000299866 RUSC1-AS1Q66K80 236 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 S100A7AQ86SG5 101 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 MAFAQ8NHW3 353 aaPredicted RBP10.47□□□□□ -0.73
TVP23A-201ENST00000299866 MRPL20Q9BYC9 149 aaKnown RBP10.47□□□□□ -0.73
TVP23A-201ENST00000299866 NDUFA4L2Q9NRX3 87 aa10.47□□□□□ -0.73
TVP23A-201ENST00000299866 A1L4Q6 167 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 FBLL1A6NHQ2 334 aaKnown RBP10.46□□□□□ -0.73
TVP23A-201ENST00000299866 TCRAP04437 139 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 MEF2CQ06413 473 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms