RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 C18orf32Q8TCD1 76 aa19.59■□□□□ 0.73
SPTSSA-201ENST00000298130 HIGD1CA8MV81 97 aa19.59■□□□□ 0.73
SPTSSA-201ENST00000298130 M0QZ24 198 aa19.59■□□□□ 0.73
SPTSSA-201ENST00000298130 C3orf36Q3SXR2 165 aa19.59■□□□□ 0.73
SPTSSA-201ENST00000298130 LOXP28300 417 aaPredicted RBP19.58■□□□□ 0.73
SPTSSA-201ENST00000298130 RPL19P84098 196 aaKnown RBP19.58■□□□□ 0.73
SPTSSA-201ENST00000298130 MEF2CQ06413 473 aaPredicted RBP19.58■□□□□ 0.73
SPTSSA-201ENST00000298130 TBR1Q16650 682 aa19.58■□□□□ 0.73
SPTSSA-201ENST00000298130 MRGPRG-AS1Q2M3A8 158 aa19.58■□□□□ 0.73
SPTSSA-201ENST00000298130 LRRC10Q5BKY1 277 aa19.58■□□□□ 0.73
SPTSSA-201ENST00000298130 OR10J3Q5JRS4 329 aa19.58■□□□□ 0.73
SPTSSA-201ENST00000298130 ST6GALNAC6Q969X2 333 aa19.58■□□□□ 0.72
SPTSSA-201ENST00000298130 SPTA1P02549 2419 aa19.57■□□□□ 0.72
SPTSSA-201ENST00000298130 BPIFB3P59826 476 aa19.57■□□□□ 0.72
SPTSSA-201ENST00000298130 UBE2G1P62253 170 aa19.57■□□□□ 0.72
SPTSSA-201ENST00000298130 MMDQ15546 238 aa19.57■□□□□ 0.72
SPTSSA-201ENST00000298130 OR2D3Q8NGH3 330 aa19.57■□□□□ 0.72
SPTSSA-201ENST00000298130 CRYABP02511 175 aaKnown RBP19.57■□□□□ 0.72
SPTSSA-201ENST00000298130 PMCHL1Q16048 86 aa19.57■□□□□ 0.72
SPTSSA-201ENST00000298130 PDPNQ86YL7 162 aa19.57■□□□□ 0.72
SPTSSA-201ENST00000298130 OR1L4Q8NGR5 311 aa19.57■□□□□ 0.72
SPTSSA-201ENST00000298130 PRSS33Q8NF86 280 aa19.56■□□□□ 0.72
SPTSSA-201ENST00000298130 SH2D7A6NKC9 451 aaPredicted RBP19.56■□□□□ 0.72
SPTSSA-201ENST00000298130 RPLP1P05386 114 aaKnown RBP19.56■□□□□ 0.72
SPTSSA-201ENST00000298130 TLN1Q9Y490 2541 aaKnown RBP19.56■□□□□ 0.72
SPTSSA-201ENST00000298130 SUB1P53999 127 aaKnown RBP eCLIP19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 FOXA3P55318 350 aaPredicted RBP19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 RNASEKQ6P5S7 137 aaKnown RBP19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 VSTM2AQ8TAG5 236 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 RNF2Q99496 336 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 DYNLRB1Q9NP97 96 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 TRAV8-1A0A0A6YYK1 113 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 NPSP0C0P6 89 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 ATP5IP56385 69 aaPredicted RBP19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 PRR30Q53SZ7 412 aaPredicted RBP19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 TMEM186Q96B77 213 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 MBD6Q96DN6 1003 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 ABHD17AQ96GS6 310 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 TMEM208Q9BTX3 173 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 VMA21Q3ZAQ7 101 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 CLEC7AQ9BXN2 247 aa19.55■□□□□ 0.72
SPTSSA-201ENST00000298130 IGLC7A0M8Q6 106 aa19.54■□□□□ 0.72
SPTSSA-201ENST00000298130 KIR3DL3Q8N743 410 aa19.54■□□□□ 0.72
SPTSSA-201ENST00000298130 EPDR1Q9UM22 224 aa19.54■□□□□ 0.72
SPTSSA-201ENST00000298130 PRRG2O14669 202 aa19.54■□□□□ 0.72
SPTSSA-201ENST00000298130 IGHV1-8P0DP01 117 aa19.53■□□□□ 0.72
SPTSSA-201ENST00000298130 TMEM30BQ3MIR4 351 aa19.53■□□□□ 0.72
SPTSSA-201ENST00000298130 BORCS7Q96B45 105 aa19.53■□□□□ 0.72
SPTSSA-201ENST00000298130 GRAMD2BQ96HH9 432 aa19.53■□□□□ 0.72
SPTSSA-201ENST00000298130 ZNF137PP52743 207 aa19.53■□□□□ 0.72
SPTSSA-201ENST00000298130 RNASE6Q93091 150 aaKnown RBP19.53■□□□□ 0.72
SPTSSA-201ENST00000298130 ZNF835Q9Y2P0 537 aa19.53■□□□□ 0.72
SPTSSA-201ENST00000298130 HSBP1O75506 76 aa19.52■□□□□ 0.72
SPTSSA-201ENST00000298130 NBEAP1P0C6P0 100 aa19.52■□□□□ 0.72
SPTSSA-201ENST00000298130 COX7A1P24310 79 aa19.52■□□□□ 0.72
SPTSSA-201ENST00000298130 Q56UQ5 140 aa19.52■□□□□ 0.72
SPTSSA-201ENST00000298130 C11orf42Q8N5U0 333 aa19.52■□□□□ 0.72
SPTSSA-201ENST00000298130 LPAR2Q9HBW0 351 aa19.52■□□□□ 0.72
SPTSSA-201ENST00000298130 TP73-AS1Q9UF72 201 aa19.52■□□□□ 0.72
SPTSSA-201ENST00000298130 ARHGAP32A7KAX9 2087 aa19.52■□□□□ 0.72
SPTSSA-201ENST00000298130 THAP8Q8NA92 274 aa19.52■□□□□ 0.72
SPTSSA-201ENST00000298130 CTRLP40313 264 aa19.51■□□□□ 0.71
SPTSSA-201ENST00000298130 PRRX1P54821 245 aa19.51■□□□□ 0.71
SPTSSA-201ENST00000298130 TXN2Q99757 166 aa19.51■□□□□ 0.71
SPTSSA-201ENST00000298130 DLX6P56179 175 aa19.51■□□□□ 0.71
SPTSSA-201ENST00000298130 OR4B1Q8NGF8 309 aa19.51■□□□□ 0.71
SPTSSA-201ENST00000298130 PGLYRP4Q96LB8 373 aa19.51■□□□□ 0.71
SPTSSA-201ENST00000298130 C7orf69Q9H7B7 122 aa19.51■□□□□ 0.71
SPTSSA-201ENST00000298130 CLEC5AQ9NY25 188 aa19.51■□□□□ 0.71
SPTSSA-201ENST00000298130 Q6ZN92 141 aa19.5■□□□□ 0.71
SPTSSA-201ENST00000298130 MED13LQ71F56 2210 aa19.5■□□□□ 0.71
SPTSSA-201ENST00000298130 E7EQL1 145 aa19.5■□□□□ 0.71
SPTSSA-201ENST00000298130 M0R2Z0 102 aa19.5■□□□□ 0.71
SPTSSA-201ENST00000298130 MYCNOSP40205 109 aa19.5■□□□□ 0.71
SPTSSA-201ENST00000298130 EBLN2Q6P2I7 272 aa19.5■□□□□ 0.71
SPTSSA-201ENST00000298130 GFRALQ6UXV0 394 aa19.5■□□□□ 0.71
SPTSSA-201ENST00000298130 HYPMO75409 117 aa19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 RPL27AP46776 148 aaKnown RBP19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 LYZP61626 148 aa19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 TMEM155Q4W5P6 130 aa19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 PERPQ96FX8 193 aa19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 FBXL15Q9H469 300 aa19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 TNFRSF13BO14836 293 aaPredicted RBP19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 Q6ZVH6 145 aa19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 S4R3C0 116 aa19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 EXOC3-AS1Q8N2X6 119 aa19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 ALKBH7Q9BT30 221 aaPredicted RBP19.49■□□□□ 0.71
SPTSSA-201ENST00000298130 COX19Q49B96 90 aa19.48■□□□□ 0.71
SPTSSA-201ENST00000298130 SPATA12Q7Z6I5 190 aa19.48■□□□□ 0.71
SPTSSA-201ENST00000298130 OR4A5Q8NH83 315 aa19.48■□□□□ 0.71
SPTSSA-201ENST00000298130 GTSF1Q8WW33 167 aa19.48■□□□□ 0.71
SPTSSA-201ENST00000298130 INS-IGF2F8WCM5 200 aa19.48■□□□□ 0.71
SPTSSA-201ENST00000298130 HIST1H1EP10412 219 aaKnown RBP19.48■□□□□ 0.71
SPTSSA-201ENST00000298130 FAM231DQ6ZW35 169 aa19.48■□□□□ 0.71
SPTSSA-201ENST00000298130 TMEM133Q9H2Q1 129 aa19.48■□□□□ 0.71
SPTSSA-201ENST00000298130 Q9H3A6 140 aa19.48■□□□□ 0.71
SPTSSA-201ENST00000298130 IGLC2P0DOY2 106 aa19.47■□□□□ 0.71
SPTSSA-201ENST00000298130 IGLC3P0DOY3 106 aa19.47■□□□□ 0.71
SPTSSA-201ENST00000298130 CIARTQ8N365 385 aaPredicted RBP19.47■□□□□ 0.71
SPTSSA-201ENST00000298130 TIMM8BQ9Y5J9 83 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms