RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CYP2G1PQ6ZSU1 146 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 SLC35E3Q7Z769 313 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 THAP8Q8NA92 274 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 C1RLQ9NZP8 487 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 SMPXQ9UHP9 88 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 HELTA6NFD8 242 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 B4DSR2 109 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 PSMB3P49720 205 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 RUSC1-AS1Q66K80 236 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 MRPL36Q9P0J6 103 aaKnown RBP11.31□□□□□ -0.6
C9orf3-202ENST00000297979 LRRK2Q5S007 2527 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
C9orf3-202ENST00000297979 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-202ENST00000297979 AKR1C3P42330 323 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 KRTAP10-9P60411 292 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 ARPC1AQ92747 370 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 SLC25A33Q9BSK2 321 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 FAM103A1Q9BTL3 118 aaKnown RBP11.31□□□□□ -0.6
C9orf3-202ENST00000297979 DNAJC4Q9NNZ3 241 aa11.31□□□□□ -0.6
C9orf3-202ENST00000297979 IGHV3OR16-10A0A075B7F0 116 aa11.3□□□□□ -0.6
C9orf3-202ENST00000297979 CXorf1O96002 111 aa11.3□□□□□ -0.6
C9orf3-202ENST00000297979 CX3CL1P78423 397 aa11.3□□□□□ -0.6
C9orf3-202ENST00000297979 MEF2BQ02080 365 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-202ENST00000297979 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
C9orf3-202ENST00000297979 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
C9orf3-202ENST00000297979 IGKV1D-37A0A075B6S9 117 aa11.3□□□□□ -0.6
C9orf3-202ENST00000297979 TCRBV4S1A1TA0A5B7 111 aa11.3□□□□□ -0.6
C9orf3-202ENST00000297979 ARL14EPLP0DKL9 152 aa11.3□□□□□ -0.6
C9orf3-202ENST00000297979 Q8N9W7 124 aa11.3□□□□□ -0.6
C9orf3-202ENST00000297979 TPPP3Q9BW30 176 aa11.3□□□□□ -0.6
C9orf3-202ENST00000297979 MT-CO2P00403 227 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 PLA2G2AP14555 144 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 RPL19P84098 196 aaKnown RBP11.29□□□□□ -0.6
C9orf3-202ENST00000297979 SPATA31B1PQ5VZV4 182 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 TMEM116Q8NCL8 245 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 GATAD1Q8WUU5 269 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 C7orf69Q9H7B7 122 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 BEX4Q9NWD9 120 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-202ENST00000297979 CRYBG3Q68DQ2 2970 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 TRAV26-1A0A087WT03 109 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 A0A1B0GV72 72 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 FAM78BQ5VT40 261 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 OR1L6Q8NGR2 347 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 FUT9Q9Y231 359 aa11.29□□□□□ -0.6
C9orf3-202ENST00000297979 M0R143 59 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 CD81P60033 236 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 SELENOTP62341 195 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 NDPQ00604 133 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 AWAT1Q58HT5 328 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 BRD3OSQ6XYD6 125 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 A0A096LNT2 108 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 IGHV3-21A0A0B4J1V1 117 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 M0R036 132 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 PAGE4O60829 102 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 FOLR2P14207 255 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 GATA3P23771 443 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 FAM90A2PQ658T7 463 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 FAM110AQ9BQ89 295 aa11.28□□□□□ -0.6
C9orf3-202ENST00000297979 KMT2BQ9UMN6 2715 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-202ENST00000297979 NPIPB5A8MRT5 1133 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 I3L2K1 104 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 J3QKU1 62 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 HLA-DRB1P01911 266 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 OR5G3P0C626 314 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 IGHV4-38-2P0DP08 117 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 ZNF90Q03938 601 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 MIR17HGQ75NE6 70 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 TRGV9Q99603 122 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 RASL11BQ9BPW5 248 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 TNFRSF19Q9NS68 423 aa11.27□□□□□ -0.6
C9orf3-202ENST00000297979 FBN2P35556 2912 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 IGHV7-81A0A0B4J1V7 117 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 DEFB113Q30KQ7 82 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 PSMB11A5LHX3 300 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 H3BQ15 152 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 SIVA1O15304 175 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 GCHFRP30047 84 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 ASPHD1Q5U4P2 390 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 LINC01356Q8N9X3 169 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 NIPSNAP3BQ9BS92 247 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 ALKBH7Q9BT30 221 aaPredicted RBP11.27□□□□□ -0.61
C9orf3-202ENST00000297979 C20orf24Q9BUV8 137 aa11.27□□□□□ -0.61
C9orf3-202ENST00000297979 DNLZQ5SXM8 178 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 LRRC75A-AS1Q8N1F1 130 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 OR4F5Q8NH21 305 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 TMEM37Q8WXS4 190 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 OR4F4Q96R69 305 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 MRPL32Q9BYC8 188 aaKnown RBP11.26□□□□□ -0.61
C9orf3-202ENST00000297979 TECRQ9NZ01 308 aaKnown RBP11.26□□□□□ -0.61
C9orf3-202ENST00000297979 TMEM250H0YL14 139 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 TTC9CQ8N5M4 171 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 OR1L4Q8NGR5 311 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 MEGF9Q9H1U4 602 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 RPS10P5Q9NQ39 176 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 YAE1D1Q9NRH1 226 aa11.26□□□□□ -0.61
C9orf3-202ENST00000297979 C11orf94C9JXX5 98 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 K7EIM0 57 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 COX7A2P2O60397 106 aa11.25□□□□□ -0.61
C9orf3-202ENST00000297979 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms