RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CD7P09564 240 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 OR4D5Q8NGN0 318 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 RNF222A6NCQ9 220 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 FOLR2P14207 255 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 WT1P19544 449 aaPredicted RBP14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 CIRBPQ14011 172 aaKnown RBP14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 ASCL4Q6XD76 172 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 KLHL30-AS1Q8NEE0 82 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 FANCMQ8IYD8 2048 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 FER1L6-AS1Q8NA97 138 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 PHF3Q92576 2039 aaKnown RBP14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 ATP5G3P48201 142 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 FHL1Q13642 323 aa14.5□□□□□ -0.09
CDC42EP3-201ENST00000295324 PTPRQQ9UMZ3 2332 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 A0A1B0GW15 77 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 MTURNQ8N3F0 131 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 RPP21Q9H633 154 aaKnown RBP14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 A0A1W2PRE2 83 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 PRSS2P07478 247 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 BTCP35070 178 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 SUMO2P61956 95 aaKnown RBP14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 PSMG4Q5JS54 123 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 Q6ZS49 121 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 SOX21Q9Y651 276 aaPredicted RBP14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 ACACBO00763 2458 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 IGFL2Q6UWQ7 119 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 F11RQ9Y624 299 aaKnown RBP14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 RNF126Q9BV68 326 aa14.49□□□□□ -0.09
CDC42EP3-201ENST00000295324 GRIFINA4D1Z8 144 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 MUC21Q5SSG8 566 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 LCNL1Q6ZST4 164 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 BEND2Q8NDZ0 799 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 COPS9Q8WXC6 57 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 J3QLI3 93 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 ITGB1BP1O14713 200 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 IGLV1-44P01699 117 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 CR1LQ2VPA4 569 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 ZNF329Q86UD4 541 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 SPOCK3Q9BQ16 436 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 KIAA1644Q3SXP7 199 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 RNF166Q96A37 237 aaPredicted RBP14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 IGHV1-69DA0A0B4J2H0 117 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 IGHV1-69P01742 117 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 EPDR1Q9UM22 224 aa14.48□□□□□ -0.09
CDC42EP3-201ENST00000295324 FAM223BA6NKX1 122 aa14.47□□□□□ -0.09
CDC42EP3-201ENST00000295324 MEIG1Q5JSS6 88 aa14.47□□□□□ -0.09
CDC42EP3-201ENST00000295324 FAM223AQ8IWN6 122 aa14.47□□□□□ -0.09
CDC42EP3-201ENST00000295324 TMEM190Q8WZ59 177 aa14.47□□□□□ -0.09
CDC42EP3-201ENST00000295324 NUP210Q8TEM1 1887 aaPredicted RBP14.47□□□□□ -0.09
CDC42EP3-201ENST00000295324 TRGV11A0A075B6L2 103 aa14.47□□□□□ -0.09
CDC42EP3-201ENST00000295324 TSPAN13O95857 204 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 IFITM2Q01629 132 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 JOSD1Q15040 202 aaPredicted RBP14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 IGHV2-70DA0A0C4DH43 119 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 PYYP10082 97 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 CDX1P47902 265 aaPredicted RBP14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 OR5AN1Q8NGI8 311 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 PRELID3AQ96N28 172 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 IL36BQ9NZH7 164 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 DMRT1Q9Y5R6 373 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 C7orf71A4D174 169 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 PSG1P11464 419 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 QRFPP83859 136 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 MRPS16Q9Y3D3 137 aaKnown RBP14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 NOTCH2Q04721 2471 aa14.46□□□□□ -0.09
CDC42EP3-201ENST00000295324 LY6G6FQ5SQ64 297 aa14.46□□□□□ -0.1
CDC42EP3-201ENST00000295324 PMCHL2Q9BQD1 86 aa14.46□□□□□ -0.1
CDC42EP3-201ENST00000295324 PSG8Q9UQ74 426 aa14.46□□□□□ -0.1
CDC42EP3-201ENST00000295324 KLF17Q5JT82 389 aaPredicted RBP14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 TRGV4A0A0C4DH28 118 aa14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 TREML4Q6UXN2 200 aa14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 RNF144BQ7Z419 303 aa14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 SRSF8Q9BRL6 282 aaKnown RBP14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 CCL20P78556 96 aa14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 TRGV9Q99603 122 aa14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 SRP19P09132 144 aaKnown RBP14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 LMO1P25800 156 aa14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 Q6ZR03 302 aa14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 LINC00518Q8N0U6 118 aa14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 NCOR1P1Q9H4R4 102 aa14.45□□□□□ -0.1
CDC42EP3-201ENST00000295324 IGLV3-9A0A075B6K5 115 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 LINC00473A8K010 186 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 ZGRF1Q86YA3 2104 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 RUSC1-AS1Q66K80 236 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 BEX4Q9NWD9 120 aaPredicted RBP14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 MUC21A0A0G2JKD1 596 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 MUC21A0A140T8X8 626 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 VOPP1Q96AW1 172 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 ERVK11-1P61568 191 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 GNG5P63218 68 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 GCSAMLQ5JQS6 135 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 IGKV1-5P01602 117 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 PRO3102Q9H379 93 aa14.44□□□□□ -0.1
CDC42EP3-201ENST00000295324 H0YIZ8 118 aa14.43□□□□□ -0.1
CDC42EP3-201ENST00000295324 K7EM74 188 aa14.43□□□□□ -0.1
CDC42EP3-201ENST00000295324 KIAA2026Q5HYC2 2103 aa14.43□□□□□ -0.1
CDC42EP3-201ENST00000295324 ALKBH7Q9BT30 221 aaPredicted RBP14.43□□□□□ -0.1
CDC42EP3-201ENST00000295324 PEF1Q9UBV8 284 aaKnown RBP14.43□□□□□ -0.1
CDC42EP3-201ENST00000295324 A0A1B0GV90 55 aa14.43□□□□□ -0.1
CDC42EP3-201ENST00000295324 ATOH7Q8N100 152 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms